| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026324
Identifier: 54026324
GI number: 54026324
Start: 4516239
End: 4517243
Strand: Reverse
Name: 54026324
Synonym: nfa43530
Alternate gene names: NA
Gene position: 4517243-4516239 (Counterclockwise)
Preceding gene: 54026325
Following gene: 54026323
Centisome position: 75.02
GC content: 74.93
Gene sequence:
>1005_bases ATGAGCGCCGATCCGGCGGCGGGCCTGGCCGACGTACTCGCCGAGACCTTCGGCGCGCCGGTGCGGGTGCGTGATCTCGA GTTCCTGTCCGCGGGCGCGCGCAGGCGCAACGTCGCGTTCACCGCCGAGGTCGAGGGGCAGGCGCCGTGCACGCTCGTGG CCACCCTCGTCCCGGCCGCGGTGGAGATCATGTCGGTGTCGGTGGAGGCGGCGGTGCGGGAACTGGCCCGCGGCAACGGC GTTCCGGTGCCCGAAGTGGTGGCGGTCTGCGCCGATCCGGCCCGCGTCGGCGAGCCGTTCCTGATCTCGGCGCATGTCGC GGGCGAGACGGTGCCGCGCAAGGTGCTGCGCCTCATCGCCGCCGAGGGCAACGCCGACCGGGTGGCCGGGCAGTGGGGCG AGGCGATGGGCAGGCTGCACGCGGTCGATCCCGGTCGGGCGCCGGAGGCGCTGCCCGCCGCGGGCGCCGACCCGGCGGCC GACGCGCTGGCCGACGCCGAGAAGGGCGTGCGCGCGCTGCTGGCCGATCGTCCGGTGTTCGCGATGGCGCTGCGCTGGCT GGAACGGCGGCTGCCCGCACCGCCACCGCGCACCGCGCTGCTGCACACCGACCTGCGCAACGGCAACATCGTGGTGGGGG CCGACGGCCTGCGCGCGGTGCTCGACTGGGAGGGCGCGCAGCGGTTCGGCGATCCGATGCGGGATGTGGCCTGGCCGGCG CTGCGGATGTGGCGCTTCCGCGAGGACGCCAGGGAATTCGGTGGCTTCGCCGACCGCGACACCTTCGTGCGCGGCTACGA GGCGGCGGGCGGCAGCTTCGACCTGGACCGGTTCCGGTGGTGGAAGGTGATGGGCACGCTCGCCTGGGGCGTCGGGTTGG CCGGGCAGGCCGCCGCGCATCTGGACGGCACCGTCCGCGACATCGTCATGGCGGCCAGCGGGCGCCGGGTGTCGGAAATC GAATGGGATCTGCTCATGCAGATCCGGCCCGCCGCACGAGCGTAG
Upstream 100 bases:
>100_bases TGCCCGACGGCGACGAGCAGGCCCTCTGGCGGGCGCTCACCGAGGTGGTGCGTGCCGAACTGGCCATCGCCAAGCCCGGC TACGACCGGTGGGAGGGCGA
Downstream 100 bases:
>100_bases GAGAGAGCGTGGATTTCGCACTGCCCGAGGAACTGACCGCCTACCTGGCCGAATTGGACGCCTTCATCGAGGCCGAGATC ATTCCCCTGGAACAGGCCGA
Product: putative phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase Family Protein; Phosphotransferase; Tyrosine Protein KinaseAminoglycoside Phosphotransferase; FadE36 Aminoglycoside Phosphotransferase
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSADPAAGLADVLAETFGAPVRVRDLEFLSAGARRRNVAFTAEVEGQAPCTLVATLVPAAVEIMSVSVEAAVRELARGNG VPVPEVVAVCADPARVGEPFLISAHVAGETVPRKVLRLIAAEGNADRVAGQWGEAMGRLHAVDPGRAPEALPAAGADPAA DALADAEKGVRALLADRPVFAMALRWLERRLPAPPPRTALLHTDLRNGNIVVGADGLRAVLDWEGAQRFGDPMRDVAWPA LRMWRFREDAREFGGFADRDTFVRGYEAAGGSFDLDRFRWWKVMGTLAWGVGLAGQAAAHLDGTVRDIVMAASGRRVSEI EWDLLMQIRPAARA
Sequences:
>Translated_334_residues MSADPAAGLADVLAETFGAPVRVRDLEFLSAGARRRNVAFTAEVEGQAPCTLVATLVPAAVEIMSVSVEAAVRELARGNG VPVPEVVAVCADPARVGEPFLISAHVAGETVPRKVLRLIAAEGNADRVAGQWGEAMGRLHAVDPGRAPEALPAAGADPAA DALADAEKGVRALLADRPVFAMALRWLERRLPAPPPRTALLHTDLRNGNIVVGADGLRAVLDWEGAQRFGDPMRDVAWPA LRMWRFREDAREFGGFADRDTFVRGYEAAGGSFDLDRFRWWKVMGTLAWGVGLAGQAAAHLDGTVRDIVMAASGRRVSEI EWDLLMQIRPAARA >Mature_333_residues SADPAAGLADVLAETFGAPVRVRDLEFLSAGARRRNVAFTAEVEGQAPCTLVATLVPAAVEIMSVSVEAAVRELARGNGV PVPEVVAVCADPARVGEPFLISAHVAGETVPRKVLRLIAAEGNADRVAGQWGEAMGRLHAVDPGRAPEALPAAGADPAAD ALADAEKGVRALLADRPVFAMALRWLERRLPAPPPRTALLHTDLRNGNIVVGADGLRAVLDWEGAQRFGDPMRDVAWPAL RMWRFREDAREFGGFADRDTFVRGYEAAGGSFDLDRFRWWKVMGTLAWGVGLAGQAAAHLDGTVRDIVMAASGRRVSEIE WDLLMQIRPAARA
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35687; Mature: 35556
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADPAAGLADVLAETFGAPVRVRDLEFLSAGARRRNVAFTAEVEGQAPCTLVATLVPAA CCCCCCCCHHHHHHHHHCCCEEEEHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHH VEIMSVSVEAAVRELARGNGVPVPEVVAVCADPARVGEPFLISAHVAGETVPRKVLRLIA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHCCCCEEEEEECCCCHHHHHHHHHHH AEGNADRVAGQWGEAMGRLHAVDPGRAPEALPAAGADPAADALADAEKGVRALLADRPVF CCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH AMALRWLERRLPAPPPRTALLHTDLRNGNIVVGADGLRAVLDWEGAQRFGDPMRDVAWPA HHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEECCCCEEHHCCCCHHHHCCHHHHHHHHH LRMWRFREDAREFGGFADRDTFVRGYEAAGGSFDLDRFRWWKVMGTLAWGVGLAGQAAAH HHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH LDGTVRDIVMAASGRRVSEIEWDLLMQIRPAARA CCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure SADPAAGLADVLAETFGAPVRVRDLEFLSAGARRRNVAFTAEVEGQAPCTLVATLVPAA CCCCCCCHHHHHHHHHCCCEEEEHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHH VEIMSVSVEAAVRELARGNGVPVPEVVAVCADPARVGEPFLISAHVAGETVPRKVLRLIA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHCCCCEEEEEECCCCHHHHHHHHHHH AEGNADRVAGQWGEAMGRLHAVDPGRAPEALPAAGADPAADALADAEKGVRALLADRPVF CCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH AMALRWLERRLPAPPPRTALLHTDLRNGNIVVGADGLRAVLDWEGAQRFGDPMRDVAWPA HHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEECCCCEEHHCCCCHHHHCCHHHHHHHHH LRMWRFREDAREFGGFADRDTFVRGYEAAGGSFDLDRFRWWKVMGTLAWGVGLAGQAAAH HHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH LDGTVRDIVMAASGRRVSEIEWDLLMQIRPAARA CCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA