| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026166
Identifier: 54026166
GI number: 54026166
Start: 4345124
End: 4346818
Strand: Reverse
Name: 54026166
Synonym: nfa41950
Alternate gene names: NA
Gene position: 4346818-4345124 (Counterclockwise)
Preceding gene: 54026169
Following gene: 54026165
Centisome position: 72.19
GC content: 76.46
Gene sequence:
>1695_bases GTGCGAGGGAGTGAGGTGACAGTGCCCGGGGAGCGGGAAACGATCGACAGCGCTGCGCTGATGCTCTGGGGGCGGCTCTG CCTCGAGGGGCTGGCCGAGCGCCGCGAGGAGATCAACTCGCTCAACGTGTTCCCCATCCCCGACGCGGACACCGGCACCA ACCTGCTGGCCACCATGCGGGCCGCGGTCGCGGCGGCCGAAGACCGGGTCGGCGCGTCCGACGGCACCGCGCACGAGGTC GCGACCGCCATGGCGCGCGGCGCGACCGCGGGCGCGCGCGGCAATTCCGGAATCATCCTGTCGCAGCTGCTGCGCGGCAT CGCCGAGGCGAGCGAACCCGGCCCGCTGACGGCGGCGACCCTGCCGCGGGCCTTGCGGCGGGCGGCCGAACTCGTGCGGG CCGCGCTGAGCGCACCGGTGGAGGGCACCATCCTCACCGTGCTCGAGTGCGCGGCCGACAGCGCGTCGGCCTGCCGCGAG CCGTCGTTGGCCGAGGTCGCCGTGGCCGCGGCCGACGGTGCCGCCAAGGCGCTCGGCGACACCCCCTCGCAGCTGCCGGT GCTGCGCGCGAACGGCGTCGTCGACGCGGGCGCGCGCGGACTGGTGGTGCTGCTCGACGCGCTGGTCGCGGTGACCCGCG GGCACCGTCCGGCCCGGCCGGAGTACCGGCGGCCCGCGGCTGTCCCCGGCGCGCGGCCCGCCGCTCCCGGCCACGCGGTG GCGCGGACACCGGCCGCGTCCGCGTCCGCGTCGGAGGGCCCGCCGACGCCGGGGTTCGAGGTGATGTACCTCGTCTCCGA CTCCGACGACGCGCGGATCGAGCGACTCCGCGGCGCCTTGACCGTGCTGGGCGACTCGGTGGTGGTGGTGGGCGACGGCG CGGGCACCTGGTCGGTGCACGTGCACTGCGCGGATGCCGGGGCGGCGGTGGAGGCCGGCCTGGCCGCGGGGACGCCGCGC GGCATCAGGATCGAGAGCTTCGATATCGACGGCGTCGGCCCGGACGGCGGGCACGCCGACGACGAGCCCGAGGACGGTCC GGCCGACCGCGGGGTGCTCGCGGTGGCGACCGGCGCCGACGCGGCGGCGCTGTTCGAGGCGGCGGGCGCGGTGGTGCTCG ACGACCATCCGGTCACCTCGGCCGGTCTGCTCTCGGCGATCCGGCAGATGCCGCACCGCGAGGTGCTGGTGCTGCCCAAC GGCGCGCTCCCCGCGCACGAGCTGGTGGCCGTCGGTGTGGCCGCGCGTGGCGAGCATCGCGACGTACTGCTGCTGCCGAG CGGGTCGATGGTGCAGGGACTGGCCGCGCTGGCGGTCCACGACCGCGCCCGCATCGCCGTCGACGACGCCTTCGCCATGT CCGAGGCCGCCGCCGCCACCCGCTGGGGTTCGCTGCGCCGCGCCGAGCAGCGCGCGCTCACCATGGTCGGCACGTGCGCC CCGGGCGACGGTCTCGGCCTGGTGGGGCACGACGTCGTCGTCATCGACCGGGACGTGCCCGGTGCCGGGCGCACGCTGCT GGACCGGATGCTCGGTCTCGGCGGCGAGCTCGTGACGCTGCTGCTGGGCGCCGACGCCGATCCCGGGCTGGCCGAGGAGC TGTGCGCGCACATCGAGGCGGGATTCCCCGGCGTCGAGGTGGTGGTGTACCCGGGCGGACAGCGGGGGGATCTGGTGCAG ATCGGGGTGGAATGA
Upstream 100 bases:
>100_bases AGCCGCCGACGCCGAGGTCACGCGCCCCGGCGGCGGTCGTCGCCGCTGTGCGGCCGGTGTCGGCGCGGGCCGCTAACCTG GCGGGCGGCGGTGGACAGCG
Downstream 100 bases:
>100_bases ACGGTGTGGAATGAGGGCTGACACATGGCGACACTGAGCGACCGGCTCGACCACATCCTCGGCGCGAAGGCGGCCGACTC GCTGGCCGACGCCTTCGACA
Product: putative dihydroxyacetone kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MRGSEVTVPGERETIDSAALMLWGRLCLEGLAERREEINSLNVFPIPDADTGTNLLATMRAAVAAAEDRVGASDGTAHEV ATAMARGATAGARGNSGIILSQLLRGIAEASEPGPLTAATLPRALRRAAELVRAALSAPVEGTILTVLECAADSASACRE PSLAEVAVAAADGAAKALGDTPSQLPVLRANGVVDAGARGLVVLLDALVAVTRGHRPARPEYRRPAAVPGARPAAPGHAV ARTPAASASASEGPPTPGFEVMYLVSDSDDARIERLRGALTVLGDSVVVVGDGAGTWSVHVHCADAGAAVEAGLAAGTPR GIRIESFDIDGVGPDGGHADDEPEDGPADRGVLAVATGADAAALFEAAGAVVLDDHPVTSAGLLSAIRQMPHREVLVLPN GALPAHELVAVGVAARGEHRDVLLLPSGSMVQGLAALAVHDRARIAVDDAFAMSEAAAATRWGSLRRAEQRALTMVGTCA PGDGLGLVGHDVVVIDRDVPGAGRTLLDRMLGLGGELVTLLLGADADPGLAEELCAHIEAGFPGVEVVVYPGGQRGDLVQ IGVE
Sequences:
>Translated_564_residues MRGSEVTVPGERETIDSAALMLWGRLCLEGLAERREEINSLNVFPIPDADTGTNLLATMRAAVAAAEDRVGASDGTAHEV ATAMARGATAGARGNSGIILSQLLRGIAEASEPGPLTAATLPRALRRAAELVRAALSAPVEGTILTVLECAADSASACRE PSLAEVAVAAADGAAKALGDTPSQLPVLRANGVVDAGARGLVVLLDALVAVTRGHRPARPEYRRPAAVPGARPAAPGHAV ARTPAASASASEGPPTPGFEVMYLVSDSDDARIERLRGALTVLGDSVVVVGDGAGTWSVHVHCADAGAAVEAGLAAGTPR GIRIESFDIDGVGPDGGHADDEPEDGPADRGVLAVATGADAAALFEAAGAVVLDDHPVTSAGLLSAIRQMPHREVLVLPN GALPAHELVAVGVAARGEHRDVLLLPSGSMVQGLAALAVHDRARIAVDDAFAMSEAAAATRWGSLRRAEQRALTMVGTCA PGDGLGLVGHDVVVIDRDVPGAGRTLLDRMLGLGGELVTLLLGADADPGLAEELCAHIEAGFPGVEVVVYPGGQRGDLVQ IGVE >Mature_564_residues MRGSEVTVPGERETIDSAALMLWGRLCLEGLAERREEINSLNVFPIPDADTGTNLLATMRAAVAAAEDRVGASDGTAHEV ATAMARGATAGARGNSGIILSQLLRGIAEASEPGPLTAATLPRALRRAAELVRAALSAPVEGTILTVLECAADSASACRE PSLAEVAVAAADGAAKALGDTPSQLPVLRANGVVDAGARGLVVLLDALVAVTRGHRPARPEYRRPAAVPGARPAAPGHAV ARTPAASASASEGPPTPGFEVMYLVSDSDDARIERLRGALTVLGDSVVVVGDGAGTWSVHVHCADAGAAVEAGLAAGTPR GIRIESFDIDGVGPDGGHADDEPEDGPADRGVLAVATGADAAALFEAAGAVVLDDHPVTSAGLLSAIRQMPHREVLVLPN GALPAHELVAVGVAARGEHRDVLLLPSGSMVQGLAALAVHDRARIAVDDAFAMSEAAAATRWGSLRRAEQRALTMVGTCA PGDGLGLVGHDVVVIDRDVPGAGRTLLDRMLGLGGELVTLLLGADADPGLAEELCAHIEAGFPGVEVVVYPGGQRGDLVQ IGVE
Specific function: Unknown
COG id: COG1461
COG function: function code R; Predicted kinase related to dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaL domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004007 - InterPro: IPR019986 [H]
Pfam domain/function: PF02734 Dak2 [H]
EC number: NA
Molecular weight: Translated: 57040; Mature: 57040
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGSEVTVPGERETIDSAALMLWGRLCLEGLAERREEINSLNVFPIPDADTGTNLLATMR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHH AAVAAAEDRVGASDGTAHEVATAMARGATAGARGNSGIILSQLLRGIAEASEPGPLTAAT HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH LPRALRRAAELVRAALSAPVEGTILTVLECAADSASACREPSLAEVAVAAADGAAKALGD HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHCCCCHHHEEEECCCCHHHHHCC TPSQLPVLRANGVVDAGARGLVVLLDALVAVTRGHRPARPEYRRPAAVPGARPAAPGHAV CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCE ARTPAASASASEGPPTPGFEVMYLVSDSDDARIERLRGALTVLGDSVVVVGDGAGTWSVH ECCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHEECCCEEEEECCCCEEEEE VHCADAGAAVEAGLAAGTPRGIRIESFDIDGVGPDGGHADDEPEDGPADRGVLAVATGAD EEECCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC AAALFEAAGAVVLDDHPVTSAGLLSAIRQMPHREVLVLPNGALPAHELVAVGVAARGEHR HHHHHHHCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCC DVLLLPSGSMVQGLAALAVHDRARIAVDDAFAMSEAAAATRWGSLRRAEQRALTMVGTCA CEEEECCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC PGDGLGLVGHDVVVIDRDVPGAGRTLLDRMLGLGGELVTLLLGADADPGLAEELCAHIEA CCCCCEECCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHEECCCCCCCHHHHHHHHHHC GFPGVEVVVYPGGQRGDLVQIGVE CCCCEEEEEECCCCCCCEEEECCC >Mature Secondary Structure MRGSEVTVPGERETIDSAALMLWGRLCLEGLAERREEINSLNVFPIPDADTGTNLLATMR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHH AAVAAAEDRVGASDGTAHEVATAMARGATAGARGNSGIILSQLLRGIAEASEPGPLTAAT HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH LPRALRRAAELVRAALSAPVEGTILTVLECAADSASACREPSLAEVAVAAADGAAKALGD HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHCCCCHHHEEEECCCCHHHHHCC TPSQLPVLRANGVVDAGARGLVVLLDALVAVTRGHRPARPEYRRPAAVPGARPAAPGHAV CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCE ARTPAASASASEGPPTPGFEVMYLVSDSDDARIERLRGALTVLGDSVVVVGDGAGTWSVH ECCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHEECCCEEEEECCCCEEEEE VHCADAGAAVEAGLAAGTPRGIRIESFDIDGVGPDGGHADDEPEDGPADRGVLAVATGAD EEECCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC AAALFEAAGAVVLDDHPVTSAGLLSAIRQMPHREVLVLPNGALPAHELVAVGVAARGEHR HHHHHHHCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCC DVLLLPSGSMVQGLAALAVHDRARIAVDDAFAMSEAAAATRWGSLRRAEQRALTMVGTCA CEEEECCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC PGDGLGLVGHDVVVIDRDVPGAGRTLLDRMLGLGGELVTLLLGADADPGLAEELCAHIEA CCCCCEECCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHEECCCCCCCHHHHHHHHHHC GFPGVEVVVYPGGQRGDLVQIGVE CCCCEEEEEECCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA