| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is acsA [H]
Identifier: 54026122
GI number: 54026122
Start: 4298761
End: 4300410
Strand: Reverse
Name: acsA [H]
Synonym: nfa41510
Alternate gene names: 54026122
Gene position: 4300410-4298761 (Counterclockwise)
Preceding gene: 54026125
Following gene: 54026121
Centisome position: 71.42
GC content: 72.67
Gene sequence:
>1650_bases ATGACGATCGACGTGGACGCACGGGTGCGTGAGTTCCTGGACACCTACGACGGACCCGACGCCTGCGCCGCGGAACTGCT GTGCGACCGGCACCCCGCGGACGCGGTCGCCTTCACGGTGATCGAGTCGGATCTGTCCTCGACCGACCTCACCTACGGTG AGCTGCGCGAGCGATCCGCACGGTTCGCCGCGGCGCTCGCCGGTCTCGGCGTCGGCCCGGGTGATCGGGTCGCCACGCTG ATGGCCAAGTCCGCGGACCTGGTGGTCGCGCTGCTGGGCATCTGGCGGCGCGGCGCGGTGCACGTGCCGCTGTTCACCGC CTTCGCCCCGCCCGCGATCGCGCTGCGGCTGGACGCGAGCCGCACGGTGGCGGTGATCGCCGACGCCGATCAGGCCGCCA AGCTGCTGCCGGGTGAGGACATCCCGACCGAGGTCCCGTGGCGGCTGATCGTCGCCGGTCAGGTCCCCGAGTCGCTGGCC GTGCGCGAGCCGCTGCGCTTCGCCGAGCTGCTGGAGTCCTACGACGCCGACGACCCGCGGGGCGCGGCCGTCGCGGTCGG CGGTGACGGGCTGCTGGTGCAGCTGTTCACCAGTGGTACCACCGGCACGCCGAAGGGCGTCCCGATTCCGGTGCGCGCGC TGGCCTCGTTCCACGCCTACCAGGAGTTCGCCCTCGACGTGCGCCCGGACGACGTGTTCTGGAACGCCGCCGACCCGGGC TGGGCCTACGGCCTCTACTACGCGATCCTGGCGCCGCTGGCCGCCGGCACCCGCAGCCTGCTGCTGCACGCCGGGTTCTC GCCCGCGCTGACCTGGCAGGTGCTGGAGAAGTTCGGCGTCACCAACTTCGCCGCCGCCCCCACCGTGTACCGGGCGCTGC GCTCCGACGACGGGCCCGCGCCCGCCGGTATCTCGCTGCGCCGGGCGTCCTCGGCGGGCGAACCGCTCACCCCGGAGGTG GTGGCCTGGTCCGCGCGCACCCTCGGTGTGCCGGTGCGCGACCACTACGGGCAGACCGAGCACGGCATGGTCATCTGCAA CGCCTGGCACGACCAGCTGAACGCGGCCGCGCCGCTGGGCTCGATGGGCCGCCAGCTGCCGGGCTGGACCTGCGCGGTGC TCTCCGACACCGCCGACGTCGAGGCCGCCCCCGGCGAGCTTGGCAGGCTGGCCATCGACACCACCCGCAGCCCGCTGATG TGGTTCCTCGGCTACCTCGACGCCCCCGAGCGCACCGCGCAACGCTTCACCGCCGACGGCCGCTGGTACCTGACCGGTGA CGCCGGCTCCCGCGACGCCGACGGCTTCTTCACCTTCTCGGCCCGCGACGACGACGTCATCATCATGGCCGGGTACCGCA TCGGCCCGTTCGAGGTCGAGAGCGTGCTGGTGATGCACGACGACGTCGCCGAGGCCGCCGTGGTCGGCCTGCCCGACGAA CTGCGCGGCGAGGTGCTCGAGGCGTTCGTGGTGCTGCGCTCCGGCGTCGACGGCAGCGCGGAGCTCGCCGCGGAGCTGCA GCAGTTGGTGAAGCAGAAGTTCGCGGCGCACGCCTACCCGCGCCGCGTGCATTTCGTGGACAGTCTGCCCAAGACGCCCA GTGGCAAGGTGCAGCGTTTCGTGCTGCGCGAACAGGAGGCCAAGCGATGA
Upstream 100 bases:
>100_bases GTCAAGGGTTTCACCCCTTTTCGGGGGTAGTCGTCAACGTGATCCGACCCACATTCTATTCGACACCGGGGAGCTGGATC ACCGAGGAGGAGAGAGCACG
Downstream 100 bases:
>100_bases CGACGGCGACAACGACGACGGCGACGAGAGCACTGCCGAGTTATGACTCCGGCCCGTCTCCCACCCCGCTGCTCGGCGAC ACGATCGGCGCGAACCTCGA
Product: putative acyl-CoA synthetase
Products: NA
Alternate protein names: Acetate--CoA ligase; Acetyl-CoA synthase; Acyl-activating enzyme [H]
Number of amino acids: Translated: 549; Mature: 548
Protein sequence:
>549_residues MTIDVDARVREFLDTYDGPDACAAELLCDRHPADAVAFTVIESDLSSTDLTYGELRERSARFAAALAGLGVGPGDRVATL MAKSADLVVALLGIWRRGAVHVPLFTAFAPPAIALRLDASRTVAVIADADQAAKLLPGEDIPTEVPWRLIVAGQVPESLA VREPLRFAELLESYDADDPRGAAVAVGGDGLLVQLFTSGTTGTPKGVPIPVRALASFHAYQEFALDVRPDDVFWNAADPG WAYGLYYAILAPLAAGTRSLLLHAGFSPALTWQVLEKFGVTNFAAAPTVYRALRSDDGPAPAGISLRRASSAGEPLTPEV VAWSARTLGVPVRDHYGQTEHGMVICNAWHDQLNAAAPLGSMGRQLPGWTCAVLSDTADVEAAPGELGRLAIDTTRSPLM WFLGYLDAPERTAQRFTADGRWYLTGDAGSRDADGFFTFSARDDDVIIMAGYRIGPFEVESVLVMHDDVAEAAVVGLPDE LRGEVLEAFVVLRSGVDGSAELAAELQQLVKQKFAAHAYPRRVHFVDSLPKTPSGKVQRFVLREQEAKR
Sequences:
>Translated_549_residues MTIDVDARVREFLDTYDGPDACAAELLCDRHPADAVAFTVIESDLSSTDLTYGELRERSARFAAALAGLGVGPGDRVATL MAKSADLVVALLGIWRRGAVHVPLFTAFAPPAIALRLDASRTVAVIADADQAAKLLPGEDIPTEVPWRLIVAGQVPESLA VREPLRFAELLESYDADDPRGAAVAVGGDGLLVQLFTSGTTGTPKGVPIPVRALASFHAYQEFALDVRPDDVFWNAADPG WAYGLYYAILAPLAAGTRSLLLHAGFSPALTWQVLEKFGVTNFAAAPTVYRALRSDDGPAPAGISLRRASSAGEPLTPEV VAWSARTLGVPVRDHYGQTEHGMVICNAWHDQLNAAAPLGSMGRQLPGWTCAVLSDTADVEAAPGELGRLAIDTTRSPLM WFLGYLDAPERTAQRFTADGRWYLTGDAGSRDADGFFTFSARDDDVIIMAGYRIGPFEVESVLVMHDDVAEAAVVGLPDE LRGEVLEAFVVLRSGVDGSAELAAELQQLVKQKFAAHAYPRRVHFVDSLPKTPSGKVQRFVLREQEAKR >Mature_548_residues TIDVDARVREFLDTYDGPDACAAELLCDRHPADAVAFTVIESDLSSTDLTYGELRERSARFAAALAGLGVGPGDRVATLM AKSADLVVALLGIWRRGAVHVPLFTAFAPPAIALRLDASRTVAVIADADQAAKLLPGEDIPTEVPWRLIVAGQVPESLAV REPLRFAELLESYDADDPRGAAVAVGGDGLLVQLFTSGTTGTPKGVPIPVRALASFHAYQEFALDVRPDDVFWNAADPGW AYGLYYAILAPLAAGTRSLLLHAGFSPALTWQVLEKFGVTNFAAAPTVYRALRSDDGPAPAGISLRRASSAGEPLTPEVV AWSARTLGVPVRDHYGQTEHGMVICNAWHDQLNAAAPLGSMGRQLPGWTCAVLSDTADVEAAPGELGRLAIDTTRSPLMW FLGYLDAPERTAQRFTADGRWYLTGDAGSRDADGFFTFSARDDDVIIMAGYRIGPFEVESVLVMHDDVAEAAVVGLPDEL RGEVLEAFVVLRSGVDGSAELAAELQQLVKQKFAAHAYPRRVHFVDSLPKTPSGKVQRFVLREQEAKR
Specific function: Has a role in growth and sporulation on acetate [H]
COG id: COG0365
COG function: function code I; Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI42544132, Length=522, Percent_Identity=34.6743295019157, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI122937307, Length=508, Percent_Identity=34.8425196850394, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI58082049, Length=521, Percent_Identity=32.6295585412668, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI38505220, Length=523, Percent_Identity=34.0344168260038, Blast_Score=228, Evalue=9e-60, Organism=Homo sapiens, GI157311624, Length=521, Percent_Identity=32.2456813819578, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI157311622, Length=521, Percent_Identity=32.2456813819578, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI115511026, Length=506, Percent_Identity=31.2252964426877, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI28416953, Length=539, Percent_Identity=31.1688311688312, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI8923896, Length=556, Percent_Identity=30.0359712230216, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI253970489, Length=560, Percent_Identity=30, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI13375727, Length=546, Percent_Identity=30.5860805860806, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI187761345, Length=531, Percent_Identity=27.683615819209, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI187761343, Length=531, Percent_Identity=27.683615819209, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI42544134, Length=347, Percent_Identity=29.1066282420749, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI156151445, Length=536, Percent_Identity=24.4402985074627, Blast_Score=106, Evalue=5e-23, Organism=Homo sapiens, GI195947378, Length=411, Percent_Identity=25.3041362530414, Blast_Score=103, Evalue=3e-22, Organism=Escherichia coli, GI1790505, Length=560, Percent_Identity=33.2142857142857, Blast_Score=224, Evalue=9e-60, Organism=Escherichia coli, GI1786529, Length=546, Percent_Identity=30.7692307692308, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI145693145, Length=510, Percent_Identity=28.8235294117647, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI1788107, Length=529, Percent_Identity=27.0321361058601, Blast_Score=125, Evalue=7e-30, Organism=Escherichia coli, GI221142682, Length=498, Percent_Identity=26.1044176706827, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1786810, Length=551, Percent_Identity=26.6787658802178, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1786801, Length=440, Percent_Identity=25, Blast_Score=91, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71983001, Length=535, Percent_Identity=31.7757009345794, Blast_Score=201, Evalue=7e-52, Organism=Caenorhabditis elegans, GI71982997, Length=535, Percent_Identity=31.7757009345794, Blast_Score=201, Evalue=9e-52, Organism=Caenorhabditis elegans, GI17558820, Length=521, Percent_Identity=26.4875239923225, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI32563687, Length=503, Percent_Identity=26.2425447316103, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17557194, Length=554, Percent_Identity=24.7292418772563, Blast_Score=128, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17538037, Length=537, Percent_Identity=25.512104283054, Blast_Score=122, Evalue=6e-28, Organism=Caenorhabditis elegans, GI17531443, Length=562, Percent_Identity=23.6654804270463, Blast_Score=103, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71996755, Length=508, Percent_Identity=24.6062992125984, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17559526, Length=383, Percent_Identity=26.6318537859008, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71985884, Length=385, Percent_Identity=28.3116883116883, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI71994690, Length=363, Percent_Identity=24.7933884297521, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71994694, Length=363, Percent_Identity=24.7933884297521, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71994703, Length=363, Percent_Identity=24.7933884297521, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17560140, Length=215, Percent_Identity=31.1627906976744, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17560308, Length=360, Percent_Identity=25.5555555555556, Blast_Score=82, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6323182, Length=559, Percent_Identity=28.8014311270125, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6319264, Length=532, Percent_Identity=29.6992481203008, Blast_Score=177, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6319699, Length=538, Percent_Identity=26.2081784386617, Blast_Score=150, Evalue=5e-37, Organism=Drosophila melanogaster, GI62472339, Length=552, Percent_Identity=29.5289855072464, Blast_Score=201, Evalue=2e-51, Organism=Drosophila melanogaster, GI24667955, Length=552, Percent_Identity=29.5289855072464, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI21355225, Length=520, Percent_Identity=29.8076923076923, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI24667959, Length=515, Percent_Identity=28.5436893203883, Blast_Score=175, Evalue=6e-44, Organism=Drosophila melanogaster, GI24581924, Length=534, Percent_Identity=27.9026217228464, Blast_Score=135, Evalue=7e-32, Organism=Drosophila melanogaster, GI19922652, Length=536, Percent_Identity=25.5597014925373, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24656500, Length=535, Percent_Identity=26.9158878504673, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI18859661, Length=523, Percent_Identity=27.151051625239, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24648257, Length=519, Percent_Identity=26.5895953757225, Blast_Score=103, Evalue=4e-22, Organism=Drosophila melanogaster, GI24648260, Length=515, Percent_Identity=26.0194174757282, Blast_Score=99, Evalue=6e-21, Organism=Drosophila melanogaster, GI21356441, Length=540, Percent_Identity=22.962962962963, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI21355181, Length=521, Percent_Identity=25.7197696737044, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI20130357, Length=375, Percent_Identity=28, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI21356947, Length=358, Percent_Identity=27.3743016759777, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI24653035, Length=363, Percent_Identity=23.9669421487603, Blast_Score=86, Evalue=8e-17, Organism=Drosophila melanogaster, GI161076582, Length=373, Percent_Identity=23.5924932975871, Blast_Score=83, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.1 [H]
Molecular weight: Translated: 58885; Mature: 58754
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDVDARVREFLDTYDGPDACAAELLCDRHPADAVAFTVIESDLSSTDLTYGELRERSA CEECCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCHHHHHHHHH RFAAALAGLGVGPGDRVATLMAKSADLVVALLGIWRRGAVHVPLFTAFAPPAIALRLDAS HHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCEECEEHHCCCCCEEEEEECCC RTVAVIADADQAAKLLPGEDIPTEVPWRLIVAGQVPESLAVREPLRFAELLESYDADDPR CEEEEEECCCHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHCHHHHHHHHHHCCCCCCC GAAVAVGGDGLLVQLFTSGTTGTPKGVPIPVRALASFHAYQEFALDVRPDDVFWNAADPG CCEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCEEEECCCCC WAYGLYYAILAPLAAGTRSLLLHAGFSPALTWQVLEKFGVTNFAAAPTVYRALRSDDGPA HHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC PAGISLRRASSAGEPLTPEVVAWSARTLGVPVRDHYGQTEHGMVICNAWHDQLNAAAPLG CCCCEEEECCCCCCCCCCHHEEECCHHCCCCHHHHCCCCCCCEEEEECCHHHHHHCCCHH SMGRQLPGWTCAVLSDTADVEAAPGELGRLAIDTTRSPLMWFLGYLDAPERTAQRFTADG HHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCC RWYLTGDAGSRDADGFFTFSARDDDVIIMAGYRIGPFEVESVLVMHDDVAEAAVVGLPDE CEEEECCCCCCCCCCEEEEECCCCCEEEEECCEECCEEEEEEEEEECCHHHHHEECCCHH LRGEVLEAFVVLRSGVDGSAELAAELQQLVKQKFAAHAYPRRVHFVDSLPKTPSGKVQRF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCHHHHHH VLREQEAKR HHHHHHHCC >Mature Secondary Structure TIDVDARVREFLDTYDGPDACAAELLCDRHPADAVAFTVIESDLSSTDLTYGELRERSA EECCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCHHHHHHHHH RFAAALAGLGVGPGDRVATLMAKSADLVVALLGIWRRGAVHVPLFTAFAPPAIALRLDAS HHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCEECEEHHCCCCCEEEEEECCC RTVAVIADADQAAKLLPGEDIPTEVPWRLIVAGQVPESLAVREPLRFAELLESYDADDPR CEEEEEECCCHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHCHHHHHHHHHHCCCCCCC GAAVAVGGDGLLVQLFTSGTTGTPKGVPIPVRALASFHAYQEFALDVRPDDVFWNAADPG CCEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCEEEECCCCC WAYGLYYAILAPLAAGTRSLLLHAGFSPALTWQVLEKFGVTNFAAAPTVYRALRSDDGPA HHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC PAGISLRRASSAGEPLTPEVVAWSARTLGVPVRDHYGQTEHGMVICNAWHDQLNAAAPLG CCCCEEEECCCCCCCCCCHHEEECCHHCCCCHHHHCCCCCCCEEEEECCHHHHHHCCCHH SMGRQLPGWTCAVLSDTADVEAAPGELGRLAIDTTRSPLMWFLGYLDAPERTAQRFTADG HHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCC RWYLTGDAGSRDADGFFTFSARDDDVIIMAGYRIGPFEVESVLVMHDDVAEAAVVGLPDE CEEEECCCCCCCCCCEEEEECCCCCEEEEECCEECCEEEEEEEEEECCHHHHHEECCCHH LRGEVLEAFVVLRSGVDGSAELAAELQQLVKQKFAAHAYPRRVHFVDSLPKTPSGKVQRF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCHHHHHH VLREQEAKR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7934817; 9387221; 9384377 [H]