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The map label for this gene is yjcS [H]

Identifier: 54026106

GI number: 54026106

Start: 4282134

End: 4284035

Strand: Reverse

Name: yjcS [H]

Synonym: nfa41350

Alternate gene names: 54026106

Gene position: 4284035-4282134 (Counterclockwise)

Preceding gene: 54026107

Following gene: 54026103

Centisome position: 71.15

GC content: 72.03

Gene sequence:

>1902_bases
ATGGACATGAGCACTGCGGCCGATCCGAGCCCGGCCATCGTCGCGGCCAACCGGCGTGCGGCCGCCGCGCTGTCGTTCGC
CGACACCACCGACGCGGCCGACGCCGACCGAGGCTTCGTCGCGGCGTTGCGCCCCGGTGTCGTCACCACCGCCGACGGAA
CCGTCGTGTGGGACAGCGACTCCTACGCGTTCCTGCGCGAGCCGTGTCCACCCTCGGTGCACCCGAGCCTGTGGCGGCAC
TGTGGATTGTCGGTGCGGCAGGGGCTGTTCGAGGTGACCGCAGGGATCTATCAGGTCAGGGGGCTCGATCTGGCCAACAT
GACCATCGTGGAGGGCGAGCGCGGCATCGTCGTCATCGATGCGCTGATGTCGGCCGAGACGGCCGCGGCGGCGTTGGCCC
TCTATCGCGAACATCGCGGCGACCGACCGGTGACCGGGTTGATCTACACGCACGCGGGCGTCGATCACTTCGGTGGCGCG
CTCGGCGTGACCACCGCGGCCGAGGTCGCGGCGGGGCGCTGTCCGGTTCTCGCGCCCGCGGGCTTCCTGGAACAGGCGGC
GGCCATGAGCACGGGTGCGGGCGTCGCGGCCGCCCGGCGCGCCTCCTACCGGTACGGAGCGGTCCTGCCGCGTGGGCCGT
TGGGCAGTGTCGGGGCCGGACTCGGGCAGACCACCTCGCTCGGCACCGTCACGCTGCTGCCGCCGACGGTCGAGATCGCG
ACCACCGGCCGGCGCGCGACCATCGACGGGGTGCCGTTCGTCTTCCAGGTCGCCGCGGCCCCGTCGGCGGCCGAGATGAC
CGTGTACCTGCCGCGGCACCGGGCACTGGGCGTGGGCGCGAGCGCCGCGCACACCCTGCACGATCCGGAGGCGCCGTGCG
GCGCGCCCGCCGGCGACCCGCGCGCGTGGACGAAGTACCTCAGCGAGACCATCACGCTGTTCGGCGACCGCAGCGAGGTG
CTGTTCGCGAGCCACCACTGGCCCACCTGGGGCCGCGACCGGGTGGTCGAACTCCTTGCGCTGCACCGCGACATGTACGG
ATACCTGCACGACCAGACACTGCGGCTGATGAATCTGGGCCACGTGGGCGCCGAGATCGCCGAACGGCTGGAACTGCCGC
CCGCGCTCGAGCACGCCTGGCACGCGCGTGGCTACCACGGCTCGGTGAGCCACCACGTCAAGGCGATCTACCAGCGCCAC
CTCGGCTGGTTCGACGGCAACCCCGCGCACCTGTGGGAGCATCCGCCGGTCGAGGCCGCGCGCAGGCACGTGGAGTTCAT
GGGCGGCCCCGAGGAGGTGCTGCGCAAGGCGCGCGCCAGCTACGAGGCCGGTGACTATCGGTGGGTGGCCCAGGTCGTCG
ACTACGTGCTCTTCACCGACCCGCACAACGAGGAAGCCCGGCACCTGCAGGCCAGCACCTTCGAACAACTCGCCTACGGC
GCGGAGAACGCCGCCTGGCGCAACATTTACCTCGGCGGCGCCTACGAGCTGCGGTACGGGATCTTCGGCACACCGAGCGC
CTGGGCCCCGGCCGGTGCGCCCGAGACGATGACCGTCGAGCAGATCTTCGACGCCGTCGCACTGCGGGTCGACGGGCCGA
AGGCGTGGGAGCTGCGGATGCTCACCGAATGGCAGCTCACCGACACCGACGAGGTCCACCGGGTGGAGGTGCGCAACGGC
GTACTCACCCACTGCCCACGCCCGCCGGGGCCGCTGCCCGAACCCGACGCGACCTTCGTCCTCGACCGCTCGGCGCTCGT
CCGGGTGTTGCTGGGGGGTGCGGATTTCGGCGTGGCGGTCGCGGCGGGCGACATCGCCATCGAGGGCGACCCGACGAAGC
TCGCCGCGCTGGTGGCCGTGCTCGACACCCCGGACCCGGATTTCGCGATCGTCACCCCGTGA

Upstream 100 bases:

>100_bases
ACGCTCGCCATCCTCGTTCTCGCCGCCGTCGGTGTGGCGGTCGTCGGCACCGAACCCTGGCCCTGACACCGCGGGCCCTG
ATGTTCGCCAGGAGGTCACG

Downstream 100 bases:

>100_bases
GCGGCGAGAACCAGGGCAGGTTCACGATGCGGCCGGCGCCGCGCTCGGGTTCAGCGGCGGGCGGGAGTGGTGAGGACGAT
GCCCGCGTCGACGGTGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 633; Mature: 633

Protein sequence:

>633_residues
MDMSTAADPSPAIVAANRRAAAALSFADTTDAADADRGFVAALRPGVVTTADGTVVWDSDSYAFLREPCPPSVHPSLWRH
CGLSVRQGLFEVTAGIYQVRGLDLANMTIVEGERGIVVIDALMSAETAAAALALYREHRGDRPVTGLIYTHAGVDHFGGA
LGVTTAAEVAAGRCPVLAPAGFLEQAAAMSTGAGVAAARRASYRYGAVLPRGPLGSVGAGLGQTTSLGTVTLLPPTVEIA
TTGRRATIDGVPFVFQVAAAPSAAEMTVYLPRHRALGVGASAAHTLHDPEAPCGAPAGDPRAWTKYLSETITLFGDRSEV
LFASHHWPTWGRDRVVELLALHRDMYGYLHDQTLRLMNLGHVGAEIAERLELPPALEHAWHARGYHGSVSHHVKAIYQRH
LGWFDGNPAHLWEHPPVEAARRHVEFMGGPEEVLRKARASYEAGDYRWVAQVVDYVLFTDPHNEEARHLQASTFEQLAYG
AENAAWRNIYLGGAYELRYGIFGTPSAWAPAGAPETMTVEQIFDAVALRVDGPKAWELRMLTEWQLTDTDEVHRVEVRNG
VLTHCPRPPGPLPEPDATFVLDRSALVRVLLGGADFGVAVAAGDIAIEGDPTKLAALVAVLDTPDPDFAIVTP

Sequences:

>Translated_633_residues
MDMSTAADPSPAIVAANRRAAAALSFADTTDAADADRGFVAALRPGVVTTADGTVVWDSDSYAFLREPCPPSVHPSLWRH
CGLSVRQGLFEVTAGIYQVRGLDLANMTIVEGERGIVVIDALMSAETAAAALALYREHRGDRPVTGLIYTHAGVDHFGGA
LGVTTAAEVAAGRCPVLAPAGFLEQAAAMSTGAGVAAARRASYRYGAVLPRGPLGSVGAGLGQTTSLGTVTLLPPTVEIA
TTGRRATIDGVPFVFQVAAAPSAAEMTVYLPRHRALGVGASAAHTLHDPEAPCGAPAGDPRAWTKYLSETITLFGDRSEV
LFASHHWPTWGRDRVVELLALHRDMYGYLHDQTLRLMNLGHVGAEIAERLELPPALEHAWHARGYHGSVSHHVKAIYQRH
LGWFDGNPAHLWEHPPVEAARRHVEFMGGPEEVLRKARASYEAGDYRWVAQVVDYVLFTDPHNEEARHLQASTFEQLAYG
AENAAWRNIYLGGAYELRYGIFGTPSAWAPAGAPETMTVEQIFDAVALRVDGPKAWELRMLTEWQLTDTDEVHRVEVRNG
VLTHCPRPPGPLPEPDATFVLDRSALVRVLLGGADFGVAVAAGDIAIEGDPTKLAALVAVLDTPDPDFAIVTP
>Mature_633_residues
MDMSTAADPSPAIVAANRRAAAALSFADTTDAADADRGFVAALRPGVVTTADGTVVWDSDSYAFLREPCPPSVHPSLWRH
CGLSVRQGLFEVTAGIYQVRGLDLANMTIVEGERGIVVIDALMSAETAAAALALYREHRGDRPVTGLIYTHAGVDHFGGA
LGVTTAAEVAAGRCPVLAPAGFLEQAAAMSTGAGVAAARRASYRYGAVLPRGPLGSVGAGLGQTTSLGTVTLLPPTVEIA
TTGRRATIDGVPFVFQVAAAPSAAEMTVYLPRHRALGVGASAAHTLHDPEAPCGAPAGDPRAWTKYLSETITLFGDRSEV
LFASHHWPTWGRDRVVELLALHRDMYGYLHDQTLRLMNLGHVGAEIAERLELPPALEHAWHARGYHGSVSHHVKAIYQRH
LGWFDGNPAHLWEHPPVEAARRHVEFMGGPEEVLRKARASYEAGDYRWVAQVVDYVLFTDPHNEEARHLQASTFEQLAYG
AENAAWRNIYLGGAYELRYGIFGTPSAWAPAGAPETMTVEQIFDAVALRVDGPKAWELRMLTEWQLTDTDEVHRVEVRNG
VLTHCPRPPGPLPEPDATFVLDRSALVRVLLGGADFGVAVAAGDIAIEGDPTKLAALVAVLDTPDPDFAIVTP

Specific function: Unknown

COG id: COG2015

COG function: function code Q; Alkyl sulfatase and related hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082368, Length=623, Percent_Identity=40.6099518459069, Blast_Score=484, Evalue=1e-138,
Organism=Saccharomyces cerevisiae, GI6324409, Length=633, Percent_Identity=40.2843601895735, Blast_Score=504, Evalue=1e-143,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR003033 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 67797; Mature: 67797

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMSTAADPSPAIVAANRRAAAALSFADTTDAADADRGFVAALRPGVVTTADGTVVWDSD
CCCCCCCCCCCEEEECCCCHHEEEEECCCCCCCCCCCCEEEEECCCEEEECCCEEEECCC
SYAFLREPCPPSVHPSLWRHCGLSVRQGLFEVTAGIYQVRGLDLANMTIVEGERGIVVID
CCEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEE
ALMSAETAAAALALYREHRGDRPVTGLIYTHAGVDHFGGALGVTTAAEVAAGRCPVLAPA
EHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHCCCHHHHHHHHHHCCCCCCCCCC
GFLEQAAAMSTGAGVAAARRASYRYGAVLPRGPLGSVGAGLGQTTSLGTVTLLPPTVEIA
HHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEE
TTGRRATIDGVPFVFQVAAAPSAAEMTVYLPRHRALGVGASAAHTLHDPEAPCGAPAGDP
ECCCEEEECCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCH
RAWTKYLSETITLFGDRSEVLFASHHWPTWGRDRVVELLALHRDMYGYLHDQTLRLMNLG
HHHHHHHHHHHEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HVGAEIAERLELPPALEHAWHARGYHGSVSHHVKAIYQRHLGWFDGNPAHLWEHPPVEAA
HHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
RRHVEFMGGPEEVLRKARASYEAGDYRWVAQVVDYVLFTDPHNEEARHLQASTFEQLAYG
HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHC
AENAAWRNIYLGGAYELRYGIFGTPSAWAPAGAPETMTVEQIFDAVALRVDGPKAWELRM
CCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEHHHHHHHHEEEECCCCCEEEEE
LTEWQLTDTDEVHRVEVRNGVLTHCPRPPGPLPEPDATFVLDRSALVRVLLGGADFGVAV
EEEEECCCCCCEEEEEECCCEEECCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCEEE
AAGDIAIEGDPTKLAALVAVLDTPDPDFAIVTP
EECCEEECCCCHHHEEEEHEECCCCCCEEEECC
>Mature Secondary Structure
MDMSTAADPSPAIVAANRRAAAALSFADTTDAADADRGFVAALRPGVVTTADGTVVWDSD
CCCCCCCCCCCEEEECCCCHHEEEEECCCCCCCCCCCCEEEEECCCEEEECCCEEEECCC
SYAFLREPCPPSVHPSLWRHCGLSVRQGLFEVTAGIYQVRGLDLANMTIVEGERGIVVID
CCEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEE
ALMSAETAAAALALYREHRGDRPVTGLIYTHAGVDHFGGALGVTTAAEVAAGRCPVLAPA
EHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHCCCHHHHHHHHHHCCCCCCCCCC
GFLEQAAAMSTGAGVAAARRASYRYGAVLPRGPLGSVGAGLGQTTSLGTVTLLPPTVEIA
HHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEE
TTGRRATIDGVPFVFQVAAAPSAAEMTVYLPRHRALGVGASAAHTLHDPEAPCGAPAGDP
ECCCEEEECCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCH
RAWTKYLSETITLFGDRSEVLFASHHWPTWGRDRVVELLALHRDMYGYLHDQTLRLMNLG
HHHHHHHHHHHEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HVGAEIAERLELPPALEHAWHARGYHGSVSHHVKAIYQRHLGWFDGNPAHLWEHPPVEAA
HHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
RRHVEFMGGPEEVLRKARASYEAGDYRWVAQVVDYVLFTDPHNEEARHLQASTFEQLAYG
HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHC
AENAAWRNIYLGGAYELRYGIFGTPSAWAPAGAPETMTVEQIFDAVALRVDGPKAWELRM
CCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCEEHHHHHHHHEEEECCCCCEEEEE
LTEWQLTDTDEVHRVEVRNGVLTHCPRPPGPLPEPDATFVLDRSALVRVLLGGADFGVAV
EEEEECCCCCCEEEEEECCCEEECCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCCEEE
AAGDIAIEGDPTKLAALVAVLDTPDPDFAIVTP
EECCEEECCCCHHHEEEEHEECCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]