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The map label for this gene is dcm [C]

Identifier: 54026007

GI number: 54026007

Start: 4187226

End: 4189004

Strand: Reverse

Name: dcm [C]

Synonym: nfa40370

Alternate gene names: 54026007

Gene position: 4189004-4187226 (Counterclockwise)

Preceding gene: 54026008

Following gene: 54026006

Centisome position: 69.57

GC content: 66.67

Gene sequence:

>1779_bases
ATGAACCGCACAGCAGAACACCGGCCCGCGAAACGGCGCCGCCGGTTCCGACATGACGACCCCGTCGCGGTCGACCTGTT
CTCCGGGTTCGGTGGACTGACCCAGGGCATCGAGTTGGCCGGATTCACCACGATCATGGCCGCGAACCACAGGCGGTACA
AAGTCGAGGTCCACGAGGCGAACCACCCGCACGCCGAACACTGGATCGCCGATCTGGTCGACCCCGAGTCCGCCGACTAC
CACTCGGCTCGGGATCTGCCCGCCGCGGACCTGCTGGTGGCGGGGGTGTCGTGCGTGAACCATTCGCAGGCCAATACGCA
GAAGGCGTACGAGCAGGGTGCGTCGCTGTTCGACCTGGAAGACCCCGAGTTCGATGCACGCGTGACGCGGTCGGAGCGGG
ACCGGGCGACCGCGAATTGCGTGCTGCATTACGCCGATCAGCATCGGCCGCGGATGATCCTGGTCGAGTGCACTACCGAG
CTGACGTCGTGGGGTCCGGCGATACCGGGTAAGCCGAAGATCGGGGACGGCTCGACCTACCGGTGGTGGTTGCGCCAGTT
CGGCAACCTCGGCTACGACCACAAGGTGCTGTACCTGAACAGCATGTTCTTCGGAGTGCCCCAGAGCCGGGACCGCCTGT
ACATCGTGTTCTGGGATCGACGGATGCCCGCCCCGGACTTGGAGCATCGCCCGCTGACGTGGTGCGGCAGCTGTGACGAC
ACGGTCGAGGCGGTGTGGTCGTGGAAGACCGGGGTGCCGCTGTCGGGCTCGGTGCGGTACGGGAAGCAGTACAACTACCG
GTGCCCGCGCTGCCGCCGCGAAATCGTGCCGCCGATGACGCCGTCGCTGTACGCGCTCGACCTGTCCAACCTGGGCGTCC
GCATCGGGGATCGGCCGCTGAAGAAGTTCAAGGTCGGTGACACGGAAGTGTTGAGCCCGCTGGCGCCGGCGACGATGGCA
CGGGCCGAGCGGTGCCGTAAGCGGTTCGCTGACTTCCCGGCGATCCTGCTGCCGGCGAAGGCGGTCCGCGGCACGGAGCG
GCACCCGTGGCAGCCGATGGCGACGCAGACCAGCCAGCAGGAGACCGCCATCCTGTCGACCGGGTCGGTAATCGCGGCGC
ACCGCCACAACGGTGACGGCAAGCACCTCACTCTGCCAATGGACACCGTCACCTCCACGTACGAGAAGGCGCTGCTGTTC
GCGGCGGTGAACAACTTCCAAGGTAGCCCGCGGGCGACAGCGGAACCGCTTCCGACACAGGCCGGTTCGGAAACGCTGGG
TCTCGTGTCGTCGGGGATTCTGCCGTTCCGCAAGAACACCCGACCGACCACACACACCGAGGCGATGCCGACCGTCACCT
CCGAACAGATCCCGGGCCTGCTCACCGCCGCCGGAGTGATCAAAAACAACGGCAACATCAGCGAAGCGAAGTACCGGGCG
CACCCCGTCAGCGACCCGTTCGGCACCATCGTCTCCTCCGCCTCGCAGTCGGTGATGTTCTCCGGCTGGATCGACCACGC
TGAATGGCGCGCCGCCCTCGCCGACCTGGCGTTGGAAGACTGCTACTTCCGCATGCTCGGACCGCACGAGGTCGGACGCG
GCTGCGGCTTCGACACCGACTTCCCCAACCACAAAGGCACCTTCATCGTGTGGGGCGCCGCCCGCGACCAAGTCGACGGA
TTCGGCAACGCGGTATCACCCAACGTGGGCGCCTGGATCGGCATCCGCCTGCGCGCCGCCTTCCACAAAGGCACCACCAG
TCTCGGAGCCACAGCATGA

Upstream 100 bases:

>100_bases
ATTCGGGAGGGCGTGAAAACGTCTCCAGCGCCGCGCCAGCGGTCGAAAACGAGGAACTGACAATGAACACCAGCCCCGCC
CGCGCGACGGGAGCGGTCGC

Downstream 100 bases:

>100_bases
ACGCCAGTGAACTGTCGAAACTGCTTTGCGCCCACTACAACGCACCGAATCGACCCATCGCCTGGCTACTCGCCAAAGAA
ATCCAGGCACCACAGTCGAG

Product: hypothetical protein

Products: S-adenosyl-L-homocysteine; DNA methylcytosine [C]

Alternate protein names: DNA Cytosine-Specific Methylase; DNA-Cytosine Methyltransferase; DNA Methyltransferase; DNA Methylase; C-5 Cytosine-Specific DNA Methylase Family Protein; Type II Restriction- System DNA Cytosine-Specific Methylase; Phage Protein; Methylase; Site-Specific DNA Methylase

Number of amino acids: Translated: 592; Mature: 592

Protein sequence:

>592_residues
MNRTAEHRPAKRRRRFRHDDPVAVDLFSGFGGLTQGIELAGFTTIMAANHRRYKVEVHEANHPHAEHWIADLVDPESADY
HSARDLPAADLLVAGVSCVNHSQANTQKAYEQGASLFDLEDPEFDARVTRSERDRATANCVLHYADQHRPRMILVECTTE
LTSWGPAIPGKPKIGDGSTYRWWLRQFGNLGYDHKVLYLNSMFFGVPQSRDRLYIVFWDRRMPAPDLEHRPLTWCGSCDD
TVEAVWSWKTGVPLSGSVRYGKQYNYRCPRCRREIVPPMTPSLYALDLSNLGVRIGDRPLKKFKVGDTEVLSPLAPATMA
RAERCRKRFADFPAILLPAKAVRGTERHPWQPMATQTSQQETAILSTGSVIAAHRHNGDGKHLTLPMDTVTSTYEKALLF
AAVNNFQGSPRATAEPLPTQAGSETLGLVSSGILPFRKNTRPTTHTEAMPTVTSEQIPGLLTAAGVIKNNGNISEAKYRA
HPVSDPFGTIVSSASQSVMFSGWIDHAEWRAALADLALEDCYFRMLGPHEVGRGCGFDTDFPNHKGTFIVWGAARDQVDG
FGNAVSPNVGAWIGIRLRAAFHKGTTSLGATA

Sequences:

>Translated_592_residues
MNRTAEHRPAKRRRRFRHDDPVAVDLFSGFGGLTQGIELAGFTTIMAANHRRYKVEVHEANHPHAEHWIADLVDPESADY
HSARDLPAADLLVAGVSCVNHSQANTQKAYEQGASLFDLEDPEFDARVTRSERDRATANCVLHYADQHRPRMILVECTTE
LTSWGPAIPGKPKIGDGSTYRWWLRQFGNLGYDHKVLYLNSMFFGVPQSRDRLYIVFWDRRMPAPDLEHRPLTWCGSCDD
TVEAVWSWKTGVPLSGSVRYGKQYNYRCPRCRREIVPPMTPSLYALDLSNLGVRIGDRPLKKFKVGDTEVLSPLAPATMA
RAERCRKRFADFPAILLPAKAVRGTERHPWQPMATQTSQQETAILSTGSVIAAHRHNGDGKHLTLPMDTVTSTYEKALLF
AAVNNFQGSPRATAEPLPTQAGSETLGLVSSGILPFRKNTRPTTHTEAMPTVTSEQIPGLLTAAGVIKNNGNISEAKYRA
HPVSDPFGTIVSSASQSVMFSGWIDHAEWRAALADLALEDCYFRMLGPHEVGRGCGFDTDFPNHKGTFIVWGAARDQVDG
FGNAVSPNVGAWIGIRLRAAFHKGTTSLGATA
>Mature_592_residues
MNRTAEHRPAKRRRRFRHDDPVAVDLFSGFGGLTQGIELAGFTTIMAANHRRYKVEVHEANHPHAEHWIADLVDPESADY
HSARDLPAADLLVAGVSCVNHSQANTQKAYEQGASLFDLEDPEFDARVTRSERDRATANCVLHYADQHRPRMILVECTTE
LTSWGPAIPGKPKIGDGSTYRWWLRQFGNLGYDHKVLYLNSMFFGVPQSRDRLYIVFWDRRMPAPDLEHRPLTWCGSCDD
TVEAVWSWKTGVPLSGSVRYGKQYNYRCPRCRREIVPPMTPSLYALDLSNLGVRIGDRPLKKFKVGDTEVLSPLAPATMA
RAERCRKRFADFPAILLPAKAVRGTERHPWQPMATQTSQQETAILSTGSVIAAHRHNGDGKHLTLPMDTVTSTYEKALLF
AAVNNFQGSPRATAEPLPTQAGSETLGLVSSGILPFRKNTRPTTHTEAMPTVTSEQIPGLLTAAGVIKNNGNISEAKYRA
HPVSDPFGTIVSSASQSVMFSGWIDHAEWRAALADLALEDCYFRMLGPHEVGRGCGFDTDFPNHKGTFIVWGAARDQVDG
FGNAVSPNVGAWIGIRLRAAFHKGTTSLGATA

Specific function: This Methylase Recognizes The Double-Stranded Sequence Ccwgg, Causes Specific Methylation On C-2 On Both Strands. [C]

COG id: COG0270

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.37 [C]

Molecular weight: Translated: 65522; Mature: 65522

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTAEHRPAKRRRRFRHDDPVAVDLFSGFGGLTQGIELAGFTTIMAANHRRYKVEVHEA
CCCCCCCCCHHHHHCCCCCCCEEEEEHHCCCCHHHCHHHHCCEEEEECCCEEEEEEEECC
NHPHAEHWIADLVDPESADYHSARDLPAADLLVAGVSCVNHSQANTQKAYEQGASLFDLE
CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECC
DPEFDARVTRSERDRATANCVLHYADQHRPRMILVECTTELTSWGPAIPGKPKIGDGSTY
CCCCCCHHCCCHHHHHHHHHEEEECCCCCCCEEEEEECHHHHHCCCCCCCCCCCCCCCHH
RWWLRQFGNLGYDHKVLYLNSMFFGVPQSRDRLYIVFWDRRMPAPDLEHRPLTWCGSCDD
HHHHHHHCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCH
TVEAVWSWKTGVPLSGSVRYGKQYNYRCPRCRREIVPPMTPSLYALDLSNLGVRIGDRPL
HHHHHHCCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCEEECCCCH
KKFKVGDTEVLSPLAPATMARAERCRKRFADFPAILLPAKAVRGTERHPWQPMATQTSQQ
HHEECCCHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCCCCCCCCCCCCCH
ETAILSTGSVIAAHRHNGDGKHLTLPMDTVTSTYEKALLFAAVNNFQGSPRATAEPLPTQ
HEEEEECCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AGSETLGLVSSGILPFRKNTRPTTHTEAMPTVTSEQIPGLLTAAGVIKNNGNISEAKYRA
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHEEECCCCCCCCEEEC
HPVSDPFGTIVSSASQSVMFSGWIDHAEWRAALADLALEDCYFRMLGPHEVGRGCGFDTD
CCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC
FPNHKGTFIVWGAARDQVDGFGNAVSPNVGAWIGIRLRAAFHKGTTSLGATA
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEHHCCCCCCCCCC
>Mature Secondary Structure
MNRTAEHRPAKRRRRFRHDDPVAVDLFSGFGGLTQGIELAGFTTIMAANHRRYKVEVHEA
CCCCCCCCCHHHHHCCCCCCCEEEEEHHCCCCHHHCHHHHCCEEEEECCCEEEEEEEECC
NHPHAEHWIADLVDPESADYHSARDLPAADLLVAGVSCVNHSQANTQKAYEQGASLFDLE
CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECC
DPEFDARVTRSERDRATANCVLHYADQHRPRMILVECTTELTSWGPAIPGKPKIGDGSTY
CCCCCCHHCCCHHHHHHHHHEEEECCCCCCCEEEEEECHHHHHCCCCCCCCCCCCCCCHH
RWWLRQFGNLGYDHKVLYLNSMFFGVPQSRDRLYIVFWDRRMPAPDLEHRPLTWCGSCDD
HHHHHHHCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCH
TVEAVWSWKTGVPLSGSVRYGKQYNYRCPRCRREIVPPMTPSLYALDLSNLGVRIGDRPL
HHHHHHCCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCEEECCCCH
KKFKVGDTEVLSPLAPATMARAERCRKRFADFPAILLPAKAVRGTERHPWQPMATQTSQQ
HHEECCCHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCCCCCCCCCCCCCH
ETAILSTGSVIAAHRHNGDGKHLTLPMDTVTSTYEKALLFAAVNNFQGSPRATAEPLPTQ
HEEEEECCCEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AGSETLGLVSSGILPFRKNTRPTTHTEAMPTVTSEQIPGLLTAAGVIKNNGNISEAKYRA
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHEEECCCCCCCCEEEC
HPVSDPFGTIVSSASQSVMFSGWIDHAEWRAALADLALEDCYFRMLGPHEVGRGCGFDTD
CCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCC
FPNHKGTFIVWGAARDQVDGFGNAVSPNVGAWIGIRLRAAFHKGTTSLGATA
CCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-methionine; DNA cytosine; DNA [C]

Specific reaction: S-Adenosyl-L-methionine + DNA cytosine =S-adenosyl-L-homocysteine + DNA methylcytosine Protein + DNA = Protein-DNA [C]

General reaction: Methyl group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA