| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54026005
Identifier: 54026005
GI number: 54026005
Start: 4185911
End: 4186426
Strand: Reverse
Name: 54026005
Synonym: nfa40350
Alternate gene names: NA
Gene position: 4186426-4185911 (Counterclockwise)
Preceding gene: 54026006
Following gene: 54026004
Centisome position: 69.53
GC content: 73.45
Gene sequence:
>516_bases ATGACCTCGCGCGCTATAGGCGGCCACCATTCCGCCCGCGCCGGATCCAACGTGTGGCTCACCCCGCCCGGTGTGATCGC GGCACTCGGTGAATTCGACCTCGACCCCTGCGCCGCCAGCCAACCACGCCCCTGGGACACGGCCCGCCACCACATCGCAC CCCCCGACAACGGGCTAGCCGCCGACTGGGCAGGCCGAGTCTTCCTCAACCCGCCCTACACCGAGCTGGCCGCCTGGCTC GGCAAACTCGCCGACCACGGCCACGGCACCGCGCTCGTGTTCGCGCGCACCGAAACCCGCTGGTTCGTCGACCTCGTCTG GGCGCGCGCCACCGCGGTCCTGTTCCTCCACCGCCGGCTGCACTTCCACCTCCCGGACGGCGCCCGCGCCCGCGGCAACT CCGGCGCGCCCTCCGTCCTCGTCGCCTACGGCGGACCCGACGCCGCCGCCCTGGCCCGCAGCGGCCTCGACGGCACCTAC ATCCACCTCACCCAGCCCGCGAAGGAGACCGCGTGA
Upstream 100 bases:
>100_bases TGCTCGACCGGATCGAGCGTGACCTCGCGGACGCGTTCGCCGGCGTGGCCGACCAGATCAGACGAGCTAGACGGCTCGGT CTCCAGACCCAGGACGTAGC
Downstream 100 bases:
>100_bases CCGCCACGTTGACGGCCGTCATCTGGGAAGACCGCCACACCGACACCACCGCCCACCTGTTCAGCGACTTCGCCGACGCC GTCGCCTGGGCGTGGGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MTSRAIGGHHSARAGSNVWLTPPGVIAALGEFDLDPCAASQPRPWDTARHHIAPPDNGLAADWAGRVFLNPPYTELAAWL GKLADHGHGTALVFARTETRWFVDLVWARATAVLFLHRRLHFHLPDGARARGNSGAPSVLVAYGGPDAAALARSGLDGTY IHLTQPAKETA
Sequences:
>Translated_171_residues MTSRAIGGHHSARAGSNVWLTPPGVIAALGEFDLDPCAASQPRPWDTARHHIAPPDNGLAADWAGRVFLNPPYTELAAWL GKLADHGHGTALVFARTETRWFVDLVWARATAVLFLHRRLHFHLPDGARARGNSGAPSVLVAYGGPDAAALARSGLDGTY IHLTQPAKETA >Mature_170_residues TSRAIGGHHSARAGSNVWLTPPGVIAALGEFDLDPCAASQPRPWDTARHHIAPPDNGLAADWAGRVFLNPPYTELAAWLG KLADHGHGTALVFARTETRWFVDLVWARATAVLFLHRRLHFHLPDGARARGNSGAPSVLVAYGGPDAAALARSGLDGTYI HLTQPAKETA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18249; Mature: 18117
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRAIGGHHSARAGSNVWLTPPGVIAALGEFDLDPCAASQPRPWDTARHHIAPPDNGLA CCCCCCCCCCCCCCCCEEEECCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADWAGRVFLNPPYTELAAWLGKLADHGHGTALVFARTETRWFVDLVWARATAVLFLHRRL CCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH HFHLPDGARARGNSGAPSVLVAYGGPDAAALARSGLDGTYIHLTQPAKETA EEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCCCCC >Mature Secondary Structure TSRAIGGHHSARAGSNVWLTPPGVIAALGEFDLDPCAASQPRPWDTARHHIAPPDNGLA CCCCCCCCCCCCCCCEEEECCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADWAGRVFLNPPYTELAAWLGKLADHGHGTALVFARTETRWFVDLVWARATAVLFLHRRL CCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH HFHLPDGARARGNSGAPSVLVAYGGPDAAALARSGLDGTYIHLTQPAKETA EEECCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA