Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54025999

Identifier: 54025999

GI number: 54025999

Start: 4182785

End: 4182997

Strand: Reverse

Name: 54025999

Synonym: nfa40290

Alternate gene names: NA

Gene position: 4182997-4182785 (Counterclockwise)

Preceding gene: 54026000

Following gene: 54025998

Centisome position: 69.47

GC content: 60.56

Gene sequence:

>213_bases
ATGACCGACAAGTTCCTCCGACTCACCGACGACGAAGACCAGGTCTTCTACGTTCGCGCCAGCAACATCAACGTCGTCGG
ACGCAACGAGTCCATGTGCTACGACTCACCAACCTCGGTCCTGATCGGGAACACCGCATTCCCGTGCAGGGAGTCCGTCG
ACGCTGTCATCGAAGCGCTTGGGGCGCACGTGATCGAGGTCGACGCCGCATGA

Upstream 100 bases:

>100_bases
TCGGTTGCGATCCGCGGGTGCGGGCAGAACTCCGCCACCGCGCGAGCCTCGCGGGCGTGACCCTCGAATCCCTCATATTC
ACCCCAGGAGACCAAGCAGC

Downstream 100 bases:

>100_bases
GCCGCATCTACTTCCACAGCCCCAGCGGCGACGCCGAGGTTTCCGGTCGCGAACGCACCCACTTCGGGCTCATCACCCAC
GAAACCAGCATCGCGCACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MTDKFLRLTDDEDQVFYVRASNINVVGRNESMCYDSPTSVLIGNTAFPCRESVDAVIEALGAHVIEVDAA

Sequences:

>Translated_70_residues
MTDKFLRLTDDEDQVFYVRASNINVVGRNESMCYDSPTSVLIGNTAFPCRESVDAVIEALGAHVIEVDAA
>Mature_69_residues
TDKFLRLTDDEDQVFYVRASNINVVGRNESMCYDSPTSVLIGNTAFPCRESVDAVIEALGAHVIEVDAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7681; Mature: 7549

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKFLRLTDDEDQVFYVRASNINVVGRNESMCYDSPTSVLIGNTAFPCRESVDAVIEAL
CCCCEEEEECCCCCEEEEECCCEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHH
GAHVIEVDAA
CCEEEEEECC
>Mature Secondary Structure 
TDKFLRLTDDEDQVFYVRASNINVVGRNESMCYDSPTSVLIGNTAFPCRESVDAVIEAL
CCCEEEEECCCCCEEEEECCCEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHH
GAHVIEVDAA
CCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA