| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54025994
Identifier: 54025994
GI number: 54025994
Start: 4181101
End: 4181310
Strand: Reverse
Name: 54025994
Synonym: nfa40240
Alternate gene names: NA
Gene position: 4181310-4181101 (Counterclockwise)
Preceding gene: 54025995
Following gene: 54025993
Centisome position: 69.44
GC content: 56.67
Gene sequence:
>210_bases ATGAGCCAGTTGCATTACGTCATCACAGTGCAATTCAGCGCATCCAACGGCATGAATGTCGCAACCAGCAGGGGCGTCAT CCCCCAGGACGGGCGTACACGCGCTCAGCTGTTCGAAGACATCTTCGCCGACGCAATCAAGCAGTGCGGTGCGCCACCCG TGTACACGAGTGTGATGTTCTTCAGTCTCGAACCGAATCAGCGACTCTGA
Upstream 100 bases:
>100_bases GCAAGACCTTCGCCGAGGTGCCGTTCGACCCGCACACCGGCCACATGCAGACCTACCCGAGCGCTGTCTCGGAGTGGCGC CCGAGTCAGGAGAAAGCAGC
Downstream 100 bases:
>100_bases TGGCGCGCTCCACTGAGCGCCGACCACTACCGGGTGATCTTCAAGCACGAAGTCATCGTCCCCGACATCGACCGGCCCTG ACCCGAGGAACGCGCCACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MSQLHYVITVQFSASNGMNVATSRGVIPQDGRTRAQLFEDIFADAIKQCGAPPVYTSVMFFSLEPNQRL
Sequences:
>Translated_69_residues MSQLHYVITVQFSASNGMNVATSRGVIPQDGRTRAQLFEDIFADAIKQCGAPPVYTSVMFFSLEPNQRL >Mature_68_residues SQLHYVITVQFSASNGMNVATSRGVIPQDGRTRAQLFEDIFADAIKQCGAPPVYTSVMFFSLEPNQRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7652; Mature: 7521
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLHYVITVQFSASNGMNVATSRGVIPQDGRTRAQLFEDIFADAIKQCGAPPVYTSVMF CCCEEEEEEEEECCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEE FSLEPNQRL EEECCCCCC >Mature Secondary Structure SQLHYVITVQFSASNGMNVATSRGVIPQDGRTRAQLFEDIFADAIKQCGAPPVYTSVMF CCEEEEEEEEECCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEE FSLEPNQRL EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA