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The map label for this gene is 54025993

Identifier: 54025993

GI number: 54025993

Start: 4180619

End: 4181101

Strand: Reverse

Name: 54025993

Synonym: nfa40230

Alternate gene names: NA

Gene position: 4181101-4180619 (Counterclockwise)

Preceding gene: 54025994

Following gene: 54025992

Centisome position: 69.44

GC content: 62.32

Gene sequence:

>483_bases
ATGGCGCGCTCCACTGAGCGCCGACCACTACCGGGTGATCTTCAAGCACGAAGTCATCGTCCCCGACATCGACCGGCCCT
GACCCGAGGAACGCGCCACATGACCGACGTCGTCAACCACCCCGCCCACTACACGCAGTCGCGCTTCACGTGTGAGTGCA
TCGACATCACCCGGCATATGACGTTTCTGGCGGGCAATGCGAGCAAATATATTTGGCGCTTCGCCGAGAAGAACGGTGTG
GAGGATCTGCGGAAGGCTGCCGTCTATCTGCGGTGGGCGATCGAAGACGGGGGCACCGCTGTCCTGTACGGGCGAGAGAA
CCTGGTGTTCGAGCTGGTGCGTGACCATGTGGTGTTGCCGTTGTATCGGCAGCCGGACGCGGCGCCTGTGTATGACGCGC
TGGTGAAGATCGGCCAGTTTTCGGACTTCGAGGCCGCGTTGGAGTTGGTCGAGTCCGCGATCCGAGACTACGAGGCGGCG
TGA

Upstream 100 bases:

>100_bases
TGTTCGAAGACATCTTCGCCGACGCAATCAAGCAGTGCGGTGCGCCACCCGTGTACACGAGTGTGATGTTCTTCAGTCTC
GAACCGAATCAGCGACTCTG

Downstream 100 bases:

>100_bases
TGGCGGATCTGAGTCTATTGCGGCGCCTCCTAGACGGTTGGGACGGTCCTGGCAGTAAAGCCATCCCAGCCGTCGTGTTC
GCGAACTACGACACCTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MARSTERRPLPGDLQARSHRPRHRPALTRGTRHMTDVVNHPAHYTQSRFTCECIDITRHMTFLAGNASKYIWRFAEKNGV
EDLRKAAVYLRWAIEDGGTAVLYGRENLVFELVRDHVVLPLYRQPDAAPVYDALVKIGQFSDFEAALELVESAIRDYEAA

Sequences:

>Translated_160_residues
MARSTERRPLPGDLQARSHRPRHRPALTRGTRHMTDVVNHPAHYTQSRFTCECIDITRHMTFLAGNASKYIWRFAEKNGV
EDLRKAAVYLRWAIEDGGTAVLYGRENLVFELVRDHVVLPLYRQPDAAPVYDALVKIGQFSDFEAALELVESAIRDYEAA
>Mature_159_residues
ARSTERRPLPGDLQARSHRPRHRPALTRGTRHMTDVVNHPAHYTQSRFTCECIDITRHMTFLAGNASKYIWRFAEKNGVE
DLRKAAVYLRWAIEDGGTAVLYGRENLVFELVRDHVVLPLYRQPDAAPVYDALVKIGQFSDFEAALELVESAIRDYEAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18309; Mature: 18178

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSTERRPLPGDLQARSHRPRHRPALTRGTRHMTDVVNHPAHYTQSRFTCECIDITRHM
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCHHCCCCCEEHHHHHHHHH
TFLAGNASKYIWRFAEKNGVEDLRKAAVYLRWAIEDGGTAVLYGRENLVFELVRDHVVLP
HHHCCCHHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCEEEEECCCHHHHHHHHHCEEEE
LYRQPDAAPVYDALVKIGQFSDFEAALELVESAIRDYEAA
EECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARSTERRPLPGDLQARSHRPRHRPALTRGTRHMTDVVNHPAHYTQSRFTCECIDITRHM
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHCCCCHHCCCCCEEHHHHHHHHH
TFLAGNASKYIWRFAEKNGVEDLRKAAVYLRWAIEDGGTAVLYGRENLVFELVRDHVVLP
HHHCCCHHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCEEEEECCCHHHHHHHHHCEEEE
LYRQPDAAPVYDALVKIGQFSDFEAALELVESAIRDYEAA
EECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA