Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54025960

Identifier: 54025960

GI number: 54025960

Start: 4167526

End: 4167729

Strand: Reverse

Name: 54025960

Synonym: nfa39900

Alternate gene names: NA

Gene position: 4167729-4167526 (Counterclockwise)

Preceding gene: 54025985

Following gene: 54025959

Centisome position: 69.22

GC content: 65.2

Gene sequence:

>204_bases
ATGAGTACAGTACAAATCACATCGACCAATCCGGCTGGCACCGGACCAACGAAAGCGAACCCCATGAACACCTCCCTCAC
CACCGACCCCCGCCCCACCTGCGGGCACGACGAGGACTGCGAACCCCTCCGCGACCTCGCCACCGGCGAGTACGTCACCT
ACTGCGGCTTCGCCACCGAATCCGCGCTGGAGGTCGCCGCGTGA

Upstream 100 bases:

>100_bases
TACACGCGAATCAACGTATGACAGTGCAATTGATATCTGGCCGAATGGGGCACTGCCGGGCAAACAGACACGTACAAGAC
GTTGACTCAACTATAAAACG

Downstream 100 bases:

>100_bases
ACACCACCCAACAGGTCCGAAACCTCCTCGACACCAACGACGACCGCGTCACCGGACACATCGGCGCCGACCACCTGTTC
GGCGACACCTGCGACGAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MSTVQITSTNPAGTGPTKANPMNTSLTTDPRPTCGHDEDCEPLRDLATGEYVTYCGFATESALEVAA

Sequences:

>Translated_67_residues
MSTVQITSTNPAGTGPTKANPMNTSLTTDPRPTCGHDEDCEPLRDLATGEYVTYCGFATESALEVAA
>Mature_66_residues
STVQITSTNPAGTGPTKANPMNTSLTTDPRPTCGHDEDCEPLRDLATGEYVTYCGFATESALEVAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7008; Mature: 6877

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVQITSTNPAGTGPTKANPMNTSLTTDPRPTCGHDEDCEPLRDLATGEYVTYCGFATE
CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCC
SALEVAA
CEEEECC
>Mature Secondary Structure 
STVQITSTNPAGTGPTKANPMNTSLTTDPRPTCGHDEDCEPLRDLATGEYVTYCGFATE
CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCCC
SALEVAA
CEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA