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The map label for this gene is 54025956

Identifier: 54025956

GI number: 54025956

Start: 4165878

End: 4166693

Strand: Reverse

Name: 54025956

Synonym: nfa39860

Alternate gene names: NA

Gene position: 4166693-4165878 (Counterclockwise)

Preceding gene: 54025957

Following gene: 54025955

Centisome position: 69.2

GC content: 68.26

Gene sequence:

>816_bases
GTGAGCAGGGAAGTGCGGCGCGTGCCACTCGACTTCAACTGGCCGCTGAACAAGGTGTGGTCGGGATACCTGACGCCGGA
GAAGTTCCACGAGACCCGGTGCCAGGACTGCTACGGGCGCGGCTCGACGCCCGCCCGCCAGTGGGTCGAGCGCATCGGCC
TGATGCTGGATCAGCTGATCCGCGACCTGGACGACCAGGCCGGCGGGAAGGCGATGCACCCGTGGCTGGCGAACGACCCC
TACCCGCCGGTGAATCGGGACAACGTGCTGTCTCGGCGCGGCTGGATGGTGGAGTACGAGGTGGTCCGCCCGTCCGCCGA
CATCGTCGAGTTCGCCCAGGAGTTGGTGAAGGACGACGAGTACGAACGCAACCGCACGATCAAACGCGGACCGTTCGCCC
AGAACCAGTACGCCATCACGAACGGCCTGCTGCGCCGAGCTGGGATGCCTGAGAAGTGGGGTTGGTGCGCGACATGCAAC
GGGCACGGGAGTGTCGAAGCCTACGAGGGTCAGCGTGCCGAGGCCGAAGCCTGGGAGCCGACCGAGCCGCCTGAAGGTGA
CGGTTGGCAGCTGTGGGAGACGGTGTCCGAGGGCTCACCGATCACCCCGGTGTTCGCGACCCGCGAGGGGCTGGTGGACC
ACCTGTGCTCGCCGGCCTACCGGCGCCCGCTGACCCGCGACGAGGCTGAGGGTTTGGTCGATGCCGGGTGGGTTCCGTCC
GGTATCGGCAACAGCCTCGGGTTCGTCGCGGGCGAGCAGTCCCAGGGGAAGTTCGCCGCGGTCGTGCTCGGCTTGACGGA
ACGGGGCGACGCGTGA

Upstream 100 bases:

>100_bases
ACGCCCTCTGCGACTACTGCCAGCAGGTGAACGACTACCTGTGGGGTGTCTCTCTCACGGTGGCGGTCTACCAGGCCGCC
GCGGCGAAGGCGGTGACCGC

Downstream 100 bases:

>100_bases
TCACCCGTCATGACGATGTCCACCGTGTCACCCACTACGGTGCCGCGCCGCTGGTCGACCACGCCGGATACAGCGTCGAG
GTCGGTGTCGAAGACGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSREVRRVPLDFNWPLNKVWSGYLTPEKFHETRCQDCYGRGSTPARQWVERIGLMLDQLIRDLDDQAGGKAMHPWLANDP
YPPVNRDNVLSRRGWMVEYEVVRPSADIVEFAQELVKDDEYERNRTIKRGPFAQNQYAITNGLLRRAGMPEKWGWCATCN
GHGSVEAYEGQRAEAEAWEPTEPPEGDGWQLWETVSEGSPITPVFATREGLVDHLCSPAYRRPLTRDEAEGLVDAGWVPS
GIGNSLGFVAGEQSQGKFAAVVLGLTERGDA

Sequences:

>Translated_271_residues
MSREVRRVPLDFNWPLNKVWSGYLTPEKFHETRCQDCYGRGSTPARQWVERIGLMLDQLIRDLDDQAGGKAMHPWLANDP
YPPVNRDNVLSRRGWMVEYEVVRPSADIVEFAQELVKDDEYERNRTIKRGPFAQNQYAITNGLLRRAGMPEKWGWCATCN
GHGSVEAYEGQRAEAEAWEPTEPPEGDGWQLWETVSEGSPITPVFATREGLVDHLCSPAYRRPLTRDEAEGLVDAGWVPS
GIGNSLGFVAGEQSQGKFAAVVLGLTERGDA
>Mature_270_residues
SREVRRVPLDFNWPLNKVWSGYLTPEKFHETRCQDCYGRGSTPARQWVERIGLMLDQLIRDLDDQAGGKAMHPWLANDPY
PPVNRDNVLSRRGWMVEYEVVRPSADIVEFAQELVKDDEYERNRTIKRGPFAQNQYAITNGLLRRAGMPEKWGWCATCNG
HGSVEAYEGQRAEAEAWEPTEPPEGDGWQLWETVSEGSPITPVFATREGLVDHLCSPAYRRPLTRDEAEGLVDAGWVPSG
IGNSLGFVAGEQSQGKFAAVVLGLTERGDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30477; Mature: 30346

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSREVRRVPLDFNWPLNKVWSGYLTPEKFHETRCQDCYGRGSTPARQWVERIGLMLDQLI
CCCCCEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RDLDDQAGGKAMHPWLANDPYPPVNRDNVLSRRGWMVEYEVVRPSADIVEFAQELVKDDE
HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCH
YERNRTIKRGPFAQNQYAITNGLLRRAGMPEKWGWCATCNGHGSVEAYEGQRAEAEAWEP
HHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCC
TEPPEGDGWQLWETVSEGSPITPVFATREGLVDHLCSPAYRRPLTRDEAEGLVDAGWVPS
CCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHCCCCHHHHCCCEECCCCCC
GIGNSLGFVAGEQSQGKFAAVVLGLTERGDA
CCCCCCCCEECCCCCCCEEEEEEEECCCCCC
>Mature Secondary Structure 
SREVRRVPLDFNWPLNKVWSGYLTPEKFHETRCQDCYGRGSTPARQWVERIGLMLDQLI
CCCCEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
RDLDDQAGGKAMHPWLANDPYPPVNRDNVLSRRGWMVEYEVVRPSADIVEFAQELVKDDE
HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCH
YERNRTIKRGPFAQNQYAITNGLLRRAGMPEKWGWCATCNGHGSVEAYEGQRAEAEAWEP
HHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCC
TEPPEGDGWQLWETVSEGSPITPVFATREGLVDHLCSPAYRRPLTRDEAEGLVDAGWVPS
CCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHCCCCHHHHCCCEECCCCCC
GIGNSLGFVAGEQSQGKFAAVVLGLTERGDA
CCCCCCCCEECCCCCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA