Click here to switch to the map view.

The map label for this gene is 54025933

Identifier: 54025933

GI number: 54025933

Start: 4155102

End: 4155758

Strand: Reverse

Name: 54025933

Synonym: nfa39630

Alternate gene names: NA

Gene position: 4155758-4155102 (Counterclockwise)

Preceding gene: 54025934

Following gene: 54025932

Centisome position: 69.02

GC content: 68.8

Gene sequence:

>657_bases
TTGAGCGAACCGACTGAACTTGTCGAAGGCGCGCGTGCGGCGTTCGCTGACGCGGTCCACGACTTGATCGGGTGGCGGTC
GGACACGATCGAACGCGATGACGGGCCAGAGACCGTGGTTCGCTCCAGCCTCTACAGCGACCTCACCGACGCGCGGCTCG
GCGAAACGTACGGGTACAGCAGCCGCCGTCCCACTCCAGCATCGCGAGGGCCGGGTTGGTCTGAGGCGCTGTCGCTGCTG
GTGCAGATCGATCAGCGTGTGGCGCAATGGTGGCCGGGTGTGCCGGACAATCAGCATGGTCAGCCGCTGACGGTGCGGCG
CCTGTATGCGCTGTGTGACCACGGGTGGCGGCCGCAGGACGTGGCCGTGCTGCGGCGAATGGCGCGGGTGGTGCGGTCGT
GGGTGGGCCAGGCGGAAGCCCTGCTGGGGGAGGATGCGGCGGCGCACCGGTACGAGCTGCGAGCTGCATGCCCGGCGTGC
GGTGCACTGCATGTGTGGGGTGAGGACGCGGCAGGGGAGACGGTGCGGCGTTACTCGCTCGTGGTGGACCGGTCGTCGGC
GCAATGCTTGGCGTGCGATACGCGGTGGGCTCCTGAGTATTACGCGATACTCGCGCGCACGATCGGAGCTGGGCTGCCGG
ACGGCGTCCTGGAGTGA

Upstream 100 bases:

>100_bases
GCGCCGAACATGACATTACCCGGCGGCGTCTGCCGACGGCGAAAGTGAACTACCGGGCGCAGGACAGGAACACGTCGGCG
GTTGAGGAGGGGGGACAGTA

Downstream 100 bases:

>100_bases
GTTGACTACACTGCATGTAGTCGAGTAGAGTTCGAGCCAACACCTTCCCGGTGCGAACGTAGACGGTTACTTCATTGCTT
GTGAAACAACACCGTCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSEPTELVEGARAAFADAVHDLIGWRSDTIERDDGPETVVRSSLYSDLTDARLGETYGYSSRRPTPASRGPGWSEALSLL
VQIDQRVAQWWPGVPDNQHGQPLTVRRLYALCDHGWRPQDVAVLRRMARVVRSWVGQAEALLGEDAAAHRYELRAACPAC
GALHVWGEDAAGETVRRYSLVVDRSSAQCLACDTRWAPEYYAILARTIGAGLPDGVLE

Sequences:

>Translated_218_residues
MSEPTELVEGARAAFADAVHDLIGWRSDTIERDDGPETVVRSSLYSDLTDARLGETYGYSSRRPTPASRGPGWSEALSLL
VQIDQRVAQWWPGVPDNQHGQPLTVRRLYALCDHGWRPQDVAVLRRMARVVRSWVGQAEALLGEDAAAHRYELRAACPAC
GALHVWGEDAAGETVRRYSLVVDRSSAQCLACDTRWAPEYYAILARTIGAGLPDGVLE
>Mature_217_residues
SEPTELVEGARAAFADAVHDLIGWRSDTIERDDGPETVVRSSLYSDLTDARLGETYGYSSRRPTPASRGPGWSEALSLLV
QIDQRVAQWWPGVPDNQHGQPLTVRRLYALCDHGWRPQDVAVLRRMARVVRSWVGQAEALLGEDAAAHRYELRAACPACG
ALHVWGEDAAGETVRRYSLVVDRSSAQCLACDTRWAPEYYAILARTIGAGLPDGVLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24015; Mature: 23884

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPTELVEGARAAFADAVHDLIGWRSDTIERDDGPETVVRSSLYSDLTDARLGETYGYS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
SRRPTPASRGPGWSEALSLLVQIDQRVAQWWPGVPDNQHGQPLTVRRLYALCDHGWRPQD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH
VAVLRRMARVVRSWVGQAEALLGEDAAAHRYELRAACPACGALHVWGEDAAGETVRRYSL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHH
VVDRSSAQCLACDTRWAPEYYAILARTIGAGLPDGVLE
HEECCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SEPTELVEGARAAFADAVHDLIGWRSDTIERDDGPETVVRSSLYSDLTDARLGETYGYS
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
SRRPTPASRGPGWSEALSLLVQIDQRVAQWWPGVPDNQHGQPLTVRRLYALCDHGWRPQD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH
VAVLRRMARVVRSWVGQAEALLGEDAAAHRYELRAACPACGALHVWGEDAAGETVRRYSL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHH
VVDRSSAQCLACDTRWAPEYYAILARTIGAGLPDGVLE
HEECCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA