| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54025931
Identifier: 54025931
GI number: 54025931
Start: 4152714
End: 4153004
Strand: Reverse
Name: 54025931
Synonym: nfa39610
Alternate gene names: NA
Gene position: 4153004-4152714 (Counterclockwise)
Preceding gene: 54025932
Following gene: 54025930
Centisome position: 68.97
GC content: 63.92
Gene sequence:
>291_bases GTGACGGGAGGAACACGAGTGTCTCGCTGGTGGAGTCTGGCTAAGGACTGGTGGTTCAACTTCCACCAGCGGGGCATCTT CGCGCACTGCCCCGGCACCTTCTGGTGGTGTGTGATCGACAATGTTGTGCACGGTTGGCCGTTCCTTATCGAAACCGTCG ATGAGGACGGCGGATACCCGGGTGAGCATTGGGTGTGCCGCCGCCACGAGGAGGCCGTGGTCCGCGCCTACATGCGTTCC GAGCACGGTGACCGTGCCCGCGCGATCAGGAGGCTCGGATGGGGACGCTGA
Upstream 100 bases:
>100_bases ACGAGTTCGGGTCGCTGACCGATGCGACGTTCCGGCTGGTGCCGCTGCTGGAGCGCGGTGTGTCGGCGGGCTGGCCGTGG GAGATGGACGCGCAGGCTGC
Downstream 100 bases:
>100_bases AACTTGGTGACCGGGTGCGTGTCCCGTTCGGTGACCGCATGGACGACGCAACCGTCTCCTACGTCGGCCCCACATGCGTC ACGGTCCTCATCCAATTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MTGGTRVSRWWSLAKDWWFNFHQRGIFAHCPGTFWWCVIDNVVHGWPFLIETVDEDGGYPGEHWVCRRHEEAVVRAYMRS EHGDRARAIRRLGWGR
Sequences:
>Translated_96_residues MTGGTRVSRWWSLAKDWWFNFHQRGIFAHCPGTFWWCVIDNVVHGWPFLIETVDEDGGYPGEHWVCRRHEEAVVRAYMRS EHGDRARAIRRLGWGR >Mature_95_residues TGGTRVSRWWSLAKDWWFNFHQRGIFAHCPGTFWWCVIDNVVHGWPFLIETVDEDGGYPGEHWVCRRHEEAVVRAYMRSE HGDRARAIRRLGWGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11456; Mature: 11325
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGGTRVSRWWSLAKDWWFNFHQRGIFAHCPGTFWWCVIDNVVHGWPFLIETVDEDGGYP CCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCHHEEEEECCCCCCC GEHWVCRRHEEAVVRAYMRSEHGDRARAIRRLGWGR CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC >Mature Secondary Structure TGGTRVSRWWSLAKDWWFNFHQRGIFAHCPGTFWWCVIDNVVHGWPFLIETVDEDGGYP CCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCHHEEEEECCCCCCC GEHWVCRRHEEAVVRAYMRSEHGDRARAIRRLGWGR CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA