Click here to switch to the map view.

The map label for this gene is 54025928

Identifier: 54025928

GI number: 54025928

Start: 4152063

End: 4152275

Strand: Reverse

Name: 54025928

Synonym: nfa39580

Alternate gene names: NA

Gene position: 4152275-4152063 (Counterclockwise)

Preceding gene: 54025929

Following gene: 54025927

Centisome position: 68.96

GC content: 62.91

Gene sequence:

>213_bases
ATGAGCCACGATCCCGTCCAAACCGTGACCGACCTCGACACCGCGCACGCCATCCGCAACACCCTCACTCGAATCGGCTG
CACGTTCGAGGAGCTACGCGACTGGGCGCAAACCTGGGACTACCCGACCGTACGCCACAAAATGGCCTGGTATGCGATCG
GCCCCTACTACGACCAGCGCGACCACTTCACGAACCTGTTGGAGGCCCCGTGA

Upstream 100 bases:

>100_bases
AACTCCCACGCCTGCAAGACGACCCCGCATTCGACCCGTACCTGAACGATCCGATCTGGGTTCGATGGAAGCAGGTTCGC
CAGTACGGGCGGATCACACG

Downstream 100 bases:

>100_bases
GCCGCGTCTACCAGCTCGAAGCAAGCCTGAACACCGACGACCACCCCTACACGCACGGCATTTTCACCAGCTCCGAGAAC
GCGGAACGCTACGCCGAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MSHDPVQTVTDLDTAHAIRNTLTRIGCTFEELRDWAQTWDYPTVRHKMAWYAIGPYYDQRDHFTNLLEAP

Sequences:

>Translated_70_residues
MSHDPVQTVTDLDTAHAIRNTLTRIGCTFEELRDWAQTWDYPTVRHKMAWYAIGPYYDQRDHFTNLLEAP
>Mature_69_residues
SHDPVQTVTDLDTAHAIRNTLTRIGCTFEELRDWAQTWDYPTVRHKMAWYAIGPYYDQRDHFTNLLEAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8281; Mature: 8150

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHDPVQTVTDLDTAHAIRNTLTRIGCTFEELRDWAQTWDYPTVRHKMAWYAIGPYYDQR
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCH
DHFTNLLEAP
HHHHHHHCCC
>Mature Secondary Structure 
SHDPVQTVTDLDTAHAIRNTLTRIGCTFEELRDWAQTWDYPTVRHKMAWYAIGPYYDQR
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCH
DHFTNLLEAP
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA