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The map label for this gene is 54025900

Identifier: 54025900

GI number: 54025900

Start: 4133156

End: 4134790

Strand: Reverse

Name: 54025900

Synonym: nfa39300

Alternate gene names: NA

Gene position: 4134790-4133156 (Counterclockwise)

Preceding gene: 54025901

Following gene: 54025899

Centisome position: 68.67

GC content: 67.71

Gene sequence:

>1635_bases
ATGTCGCTGCCCGATTTCCGTGGTGAGTTCCCGCCCACCCCCTGGGACGCCGCGCAGGACCAGTACGACCTGCACTCGGC
GTGGCTGGAAGGCGACACCGAAGCCCTCGAAGGGCTGTACGGACCATACGCGCACACCCGCCGGCCACCCGACCGGCCAT
CCACCTTCCGCGGCGGCCTCGTCGGGCGCGTAGCCCGGTTCTTCTGGGGTCGCCCGTCGAAAGGCCAGGACACCAAACGC
CTGCACGTGCCCGCGCCCGCTGACGTGGCCCGCACCTCGGCCGACCTGCTGTTCGGGCAGCCCCCGTCCTGGCTGCTCTC
CGAAGGTGACGCCGACGCGATGCAAGCCGCGCAAGATCGACTGAACCAGCTGCTCGACGGCGCCGACGTGGTCGCCACCC
TGCTGGAGGCAGCGGAACTGCAGGCCGCTCTCGGCGGCGTATACCTGCGCATGTGGTGGGACACTGAGGCCACCGACAAG
GTCATGATCTCGGCAGTCGCACCTGACGCTGCGATTCCGCAGTGGCGCTACGGCAAGCTGGCCGCGGTCACCTTCTGGAG
CATCGTCGGCCGGGACCAGCGCGGCACCTGGCGGCACCTGGAACACCACGAACCCGGCCGCATCGAACACGCCCTGTACT
GCGGCGACGACAGCACGATCGGACGCCGGATGCCACTGTCGGAGATGGCCGCGACCGCCTGGGCCGCGGACCTCGTCGAC
GAGGAATCCGCGATCGAGACAGGCGTGACCGGGCTGACCGCCTGCTACATCCCGAACGTGCGGCCCGCCCGCCGGTGGCG
CAACGTTCCCGGCCTCGCCCCTCTTGGCCGTTCCGATTTCGAGGGCGTCGAACCGCTCTTCGACGCGCTCGACGAGGCGT
ACAGCTCGTGGATGCGTGACCTGCACCTCGCCAAGGCGCGCCTGTTCGTCTCCGCGGACATGCTCGAATCCAACGGCCCC
GGAGCAGGAGCCACTTGGGACTCCGAGCAGGAGATTTTCACTCCGCTCAACGGCGCCGACGCGGGCAGCTACGCCGACGG
TGCGCCGAGCATGAGCGACTTGATCCACTCGGAGCAGTTCGCGATCCGGCACGAGGAACACCTCGCCACCTGCACCGCGA
TCATGAACCGGATCCTTGTTGCCTGCGGCTATTCGGTGGGCGACTTCGGCGACGACCAACTGGCCGGTGCGATGACCGCC
ACCGAGGTGACCGCCCGTAAGTCGCTGTCGAATCAGACACGCGCGAAGAAGATCCTGTACTGGCAGGCTGCGATGCAGCC
GTTCGCTCGGACGATGTTGGAGCTGGACGCTCACGTCTACGGCGGTTCCTACGGGCTCAAGGCCGACCCGGAGATGGTCT
TCCCGGTCCGCGTCGACGAAGACCCGTTGGCGTTGTCGCAGACGGTCGCGAATCTGCGAGCCGCGCAGGCAATGTCGATC
GAGACGGGCGTGCGGCGCGTGAACCCCAACTGGTCCAACGACGAAGTGGACGACGAGGTGGCCCGGATCAAGGAAGAGAC
CTCCTTGACGGTGGTCGACCCGACCGGCGGCGACTTCGAACCCGAAACCGAGGAAGCGCACTCGGGCTTGTCAGGCGACA
TCGAGTCTGACACGGAGGTGCAGGAGGCCGCCTGA

Upstream 100 bases:

>100_bases
TTGACTCGTGCCGGGGAACCTTCACACCTGAGTCTCGTCTGACACCCAAACTTCACAGCGCAGCAACGGATTCCAGCGCG
CATACCCTCATGGAGGTGGC

Downstream 100 bases:

>100_bases
TGCCTCTCACCCCCTCATACGGTGACCGTCGCGCCGGACCGGTCGTGCGCCTGTACCGACGCACTGAACGGCGGCTGTTG
GAGCTGCTGGCCAAGACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 544; Mature: 543

Protein sequence:

>544_residues
MSLPDFRGEFPPTPWDAAQDQYDLHSAWLEGDTEALEGLYGPYAHTRRPPDRPSTFRGGLVGRVARFFWGRPSKGQDTKR
LHVPAPADVARTSADLLFGQPPSWLLSEGDADAMQAAQDRLNQLLDGADVVATLLEAAELQAALGGVYLRMWWDTEATDK
VMISAVAPDAAIPQWRYGKLAAVTFWSIVGRDQRGTWRHLEHHEPGRIEHALYCGDDSTIGRRMPLSEMAATAWAADLVD
EESAIETGVTGLTACYIPNVRPARRWRNVPGLAPLGRSDFEGVEPLFDALDEAYSSWMRDLHLAKARLFVSADMLESNGP
GAGATWDSEQEIFTPLNGADAGSYADGAPSMSDLIHSEQFAIRHEEHLATCTAIMNRILVACGYSVGDFGDDQLAGAMTA
TEVTARKSLSNQTRAKKILYWQAAMQPFARTMLELDAHVYGGSYGLKADPEMVFPVRVDEDPLALSQTVANLRAAQAMSI
ETGVRRVNPNWSNDEVDDEVARIKEETSLTVVDPTGGDFEPETEEAHSGLSGDIESDTEVQEAA

Sequences:

>Translated_544_residues
MSLPDFRGEFPPTPWDAAQDQYDLHSAWLEGDTEALEGLYGPYAHTRRPPDRPSTFRGGLVGRVARFFWGRPSKGQDTKR
LHVPAPADVARTSADLLFGQPPSWLLSEGDADAMQAAQDRLNQLLDGADVVATLLEAAELQAALGGVYLRMWWDTEATDK
VMISAVAPDAAIPQWRYGKLAAVTFWSIVGRDQRGTWRHLEHHEPGRIEHALYCGDDSTIGRRMPLSEMAATAWAADLVD
EESAIETGVTGLTACYIPNVRPARRWRNVPGLAPLGRSDFEGVEPLFDALDEAYSSWMRDLHLAKARLFVSADMLESNGP
GAGATWDSEQEIFTPLNGADAGSYADGAPSMSDLIHSEQFAIRHEEHLATCTAIMNRILVACGYSVGDFGDDQLAGAMTA
TEVTARKSLSNQTRAKKILYWQAAMQPFARTMLELDAHVYGGSYGLKADPEMVFPVRVDEDPLALSQTVANLRAAQAMSI
ETGVRRVNPNWSNDEVDDEVARIKEETSLTVVDPTGGDFEPETEEAHSGLSGDIESDTEVQEAA
>Mature_543_residues
SLPDFRGEFPPTPWDAAQDQYDLHSAWLEGDTEALEGLYGPYAHTRRPPDRPSTFRGGLVGRVARFFWGRPSKGQDTKRL
HVPAPADVARTSADLLFGQPPSWLLSEGDADAMQAAQDRLNQLLDGADVVATLLEAAELQAALGGVYLRMWWDTEATDKV
MISAVAPDAAIPQWRYGKLAAVTFWSIVGRDQRGTWRHLEHHEPGRIEHALYCGDDSTIGRRMPLSEMAATAWAADLVDE
ESAIETGVTGLTACYIPNVRPARRWRNVPGLAPLGRSDFEGVEPLFDALDEAYSSWMRDLHLAKARLFVSADMLESNGPG
AGATWDSEQEIFTPLNGADAGSYADGAPSMSDLIHSEQFAIRHEEHLATCTAIMNRILVACGYSVGDFGDDQLAGAMTAT
EVTARKSLSNQTRAKKILYWQAAMQPFARTMLELDAHVYGGSYGLKADPEMVFPVRVDEDPLALSQTVANLRAAQAMSIE
TGVRRVNPNWSNDEVDDEVARIKEETSLTVVDPTGGDFEPETEEAHSGLSGDIESDTEVQEAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59520; Mature: 59388

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPDFRGEFPPTPWDAAQDQYDLHSAWLEGDTEALEGLYGPYAHTRRPPDRPSTFRGGL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCHHHCCCCCCCCCCHHCHH
VGRVARFFWGRPSKGQDTKRLHVPAPADVARTSADLLFGQPPSWLLSEGDADAMQAAQDR
HHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHH
LNQLLDGADVVATLLEAAELQAALGGVYLRMWWDTEATDKVMISAVAPDAAIPQWRYGKL
HHHHHCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCH
AAVTFWSIVGRDQRGTWRHLEHHEPGRIEHALYCGDDSTIGRRMPLSEMAATAWAADLVD
HHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC
EESAIETGVTGLTACYIPNVRPARRWRNVPGLAPLGRSDFEGVEPLFDALDEAYSSWMRD
CHHHHHHCCCHHEEEECCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LHLAKARLFVSADMLESNGPGAGATWDSEQEIFTPLNGADAGSYADGAPSMSDLIHSEQF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AIRHEEHLATCTAIMNRILVACGYSVGDFGDDQLAGAMTATEVTARKSLSNQTRAKKILY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WQAAMQPFARTMLELDAHVYGGSYGLKADPEMVFPVRVDEDPLALSQTVANLRAAQAMSI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
ETGVRRVNPNWSNDEVDDEVARIKEETSLTVVDPTGGDFEPETEEAHSGLSGDIESDTEV
HHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCHH
QEAA
HHCC
>Mature Secondary Structure 
SLPDFRGEFPPTPWDAAQDQYDLHSAWLEGDTEALEGLYGPYAHTRRPPDRPSTFRGGL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCHHHCCCCCCCCCCHHCHH
VGRVARFFWGRPSKGQDTKRLHVPAPADVARTSADLLFGQPPSWLLSEGDADAMQAAQDR
HHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHH
LNQLLDGADVVATLLEAAELQAALGGVYLRMWWDTEATDKVMISAVAPDAAIPQWRYGKL
HHHHHCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCH
AAVTFWSIVGRDQRGTWRHLEHHEPGRIEHALYCGDDSTIGRRMPLSEMAATAWAADLVD
HHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC
EESAIETGVTGLTACYIPNVRPARRWRNVPGLAPLGRSDFEGVEPLFDALDEAYSSWMRD
CHHHHHHCCCHHEEEECCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LHLAKARLFVSADMLESNGPGAGATWDSEQEIFTPLNGADAGSYADGAPSMSDLIHSEQF
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH
AIRHEEHLATCTAIMNRILVACGYSVGDFGDDQLAGAMTATEVTARKSLSNQTRAKKILY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WQAAMQPFARTMLELDAHVYGGSYGLKADPEMVFPVRVDEDPLALSQTVANLRAAQAMSI
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHH
ETGVRRVNPNWSNDEVDDEVARIKEETSLTVVDPTGGDFEPETEEAHSGLSGDIESDTEV
HHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCHH
QEAA
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA