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The map label for this gene is 54025875

Identifier: 54025875

GI number: 54025875

Start: 4111369

End: 4111854

Strand: Reverse

Name: 54025875

Synonym: nfa39050

Alternate gene names: NA

Gene position: 4111854-4111369 (Counterclockwise)

Preceding gene: 54025876

Following gene: 54025874

Centisome position: 68.29

GC content: 63.99

Gene sequence:

>486_bases
ATGCCGCGAGACGACTGGTCAGACACTGTGCCGCCGCTCCAGCACCCGGACGATCCGCTCCGGTTCGTCAAAGAGTATGT
GTGGGGTTTGGCGATGGACAAGCTCGGCATCACCCGGCACCGCCGCTACACCGACCTGCCCGATGACGTGAAATTCGTGT
ACAACCGGGTCGTTCCGGCGCTGGTGGACGCGATCCTCGCTGACGACCCGGACTGGAACCCCGACGACGAATGGCTGAAA
GGACGCCGTCCGCCCACCGTCGCGAAAGGCACCGCGGCGCTGAGGTGGTTCGTCGAGATCCAGGAACTTCAGAAGGCCAC
CTTCGAACTGTCCTCGGACCTGCTCAATAGCGCTCTCTACGACCGGCTTTACCGCGACCACGACCGACACGGCTGCTTCC
TTTCAGACCTGCGTACCGCCCTGATGAAGGGCGACCCCGAATGGCGCGGCCCCTACATCGACACCACCCCGCCACTTCCC
ACGTAG

Upstream 100 bases:

>100_bases
GCCTCGGGCGGTGTCCTGCCGTCATCACTACCTGCCGTGAATCAGCACTGGAACAACGATCCGATGACTGTGCCCTTCGT
TTTCTTGCGGGAGGAGTGAG

Downstream 100 bases:

>100_bases
CGGGTGGACATTCCCTGCGAGGGGACACGAAATGACAATCGGACACCAGCCGCTCGTCGACGCACTCGTCCTCGTCACCG
GCCAGGACTTCATACACGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MPRDDWSDTVPPLQHPDDPLRFVKEYVWGLAMDKLGITRHRRYTDLPDDVKFVYNRVVPALVDAILADDPDWNPDDEWLK
GRRPPTVAKGTAALRWFVEIQELQKATFELSSDLLNSALYDRLYRDHDRHGCFLSDLRTALMKGDPEWRGPYIDTTPPLP
T

Sequences:

>Translated_161_residues
MPRDDWSDTVPPLQHPDDPLRFVKEYVWGLAMDKLGITRHRRYTDLPDDVKFVYNRVVPALVDAILADDPDWNPDDEWLK
GRRPPTVAKGTAALRWFVEIQELQKATFELSSDLLNSALYDRLYRDHDRHGCFLSDLRTALMKGDPEWRGPYIDTTPPLP
T
>Mature_160_residues
PRDDWSDTVPPLQHPDDPLRFVKEYVWGLAMDKLGITRHRRYTDLPDDVKFVYNRVVPALVDAILADDPDWNPDDEWLKG
RRPPTVAKGTAALRWFVEIQELQKATFELSSDLLNSALYDRLYRDHDRHGCFLSDLRTALMKGDPEWRGPYIDTTPPLPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18717; Mature: 18586

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRDDWSDTVPPLQHPDDPLRFVKEYVWGLAMDKLGITRHRRYTDLPDDVKFVYNRVVPA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LVDAILADDPDWNPDDEWLKGRRPPTVAKGTAALRWFVEIQELQKATFELSSDLLNSALY
HHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLYRDHDRHGCFLSDLRTALMKGDPEWRGPYIDTTPPLPT
HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRDDWSDTVPPLQHPDDPLRFVKEYVWGLAMDKLGITRHRRYTDLPDDVKFVYNRVVPA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LVDAILADDPDWNPDDEWLKGRRPPTVAKGTAALRWFVEIQELQKATFELSSDLLNSALY
HHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLYRDHDRHGCFLSDLRTALMKGDPEWRGPYIDTTPPLPT
HHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA