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The map label for this gene is 54025863

Identifier: 54025863

GI number: 54025863

Start: 4105949

End: 4106791

Strand: Reverse

Name: 54025863

Synonym: nfa38930

Alternate gene names: NA

Gene position: 4106791-4105949 (Counterclockwise)

Preceding gene: 54025864

Following gene: 54025862

Centisome position: 68.21

GC content: 66.43

Gene sequence:

>843_bases
TTGACCACCAATCCGCACGAGGCTCGGGAGGCGCTGGGACGGCGCCTCCGCGAACTGCGGCGCCGCGCAGGACTGTCCGG
CCGCGGCATGGCCGCTCTCGTCGGATGGCATGAATCCAAGGTCTCCAAGATCGAGTACGGGAAGCTACGCCCCTCCGACG
ACGACATCCGCGCCTACTGCCTGCACGCGGGCGCACTCGACCAACTCGAAGACCTCCTCGCCACCCTCCACAACCTCGAC
GGCGCCTACATGGAGATGCGGCGCCTGCTCGCACGCGGCCAGGGCCGCAGTCAAGCCCAGCTGGTGCGGCTGGCCGAGGA
GACCAAGCACACGCGAATCTTCCAGAACCAGGTGATCCCGGGGATTCTGCAAACGTCGGAGTACGCGCGCGCGACGCTCG
AATTCTCGGCCGCCCGCCACCGCCTGCCCGTCGACGACGTGGAGGAGGGCGTGGCGCGTCGGATGGAGCGCCAGCAATTC
TTGTATCGGGGGGATCGCCGCTTCCACATCTTGATCGCTGAGCAGGCGTTGTGGACGACTGTGGGCAGTGTGGATGTGAT
GGCGGGGCAGATGGACCGACTGGTGGCGGTGTCGAGTCTTCCGCGCCTGATCCTCGGTATCGTCCCGGCGACGGCTGAGA
TTCCGATGCAGACTACGAATTTCGTCATGTTCGACGACCGGCTGGTGACGGTGGAGACGATCACCGCGGAGCTGAAGGTG
ACGCAGCCGCGCGAGGTAGCTATGTACGCGCAGGCGTTCGAGCTGCTCGCGGAGCAGTCGGTTACGGGGGAGAAGGCTCG
CGCGCTCATCGTGAGCGTGCTGGAGCGGCGCCGCAACCACTAG

Upstream 100 bases:

>100_bases
GGCTCGCGATCACCAGCGACCCGCACATCGCCGCCTACTGCCGCGGCATCCGCGACCGCCTGTGGTCTTCCGCCACCCCG
TACCGCGACTATCTGGGCCA

Downstream 100 bases:

>100_bases
ACCCTCGCGTTGTGTGACCTTCACCGCCCGCGGGCCCGCCCTGCCCAACCCTTCCTGCGTTCTCTAGCCTCCTTCCATGC
AGTGAAGTACTGTGTATATA

Product: putative DNA-binding protein

Products: NA

Alternate protein names: Xre Family xin-Antitoxin System Antitoxin Component; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator XRE Family; Transcriptional Regulator; SARP Family Transcriptional Regulator

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MTTNPHEAREALGRRLRELRRRAGLSGRGMAALVGWHESKVSKIEYGKLRPSDDDIRAYCLHAGALDQLEDLLATLHNLD
GAYMEMRRLLARGQGRSQAQLVRLAEETKHTRIFQNQVIPGILQTSEYARATLEFSAARHRLPVDDVEEGVARRMERQQF
LYRGDRRFHILIAEQALWTTVGSVDVMAGQMDRLVAVSSLPRLILGIVPATAEIPMQTTNFVMFDDRLVTVETITAELKV
TQPREVAMYAQAFELLAEQSVTGEKARALIVSVLERRRNH

Sequences:

>Translated_280_residues
MTTNPHEAREALGRRLRELRRRAGLSGRGMAALVGWHESKVSKIEYGKLRPSDDDIRAYCLHAGALDQLEDLLATLHNLD
GAYMEMRRLLARGQGRSQAQLVRLAEETKHTRIFQNQVIPGILQTSEYARATLEFSAARHRLPVDDVEEGVARRMERQQF
LYRGDRRFHILIAEQALWTTVGSVDVMAGQMDRLVAVSSLPRLILGIVPATAEIPMQTTNFVMFDDRLVTVETITAELKV
TQPREVAMYAQAFELLAEQSVTGEKARALIVSVLERRRNH
>Mature_279_residues
TTNPHEAREALGRRLRELRRRAGLSGRGMAALVGWHESKVSKIEYGKLRPSDDDIRAYCLHAGALDQLEDLLATLHNLDG
AYMEMRRLLARGQGRSQAQLVRLAEETKHTRIFQNQVIPGILQTSEYARATLEFSAARHRLPVDDVEEGVARRMERQQFL
YRGDRRFHILIAEQALWTTVGSVDVMAGQMDRLVAVSSLPRLILGIVPATAEIPMQTTNFVMFDDRLVTVETITAELKVT
QPREVAMYAQAFELLAEQSVTGEKARALIVSVLERRRNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31682; Mature: 31551

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNPHEAREALGRRLRELRRRAGLSGRGMAALVGWHESKVSKIEYGKLRPSDDDIRAYC
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCHHHHH
LHAGALDQLEDLLATLHNLDGAYMEMRRLLARGQGRSQAQLVRLAEETKHTRIFQNQVIP
HHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
GILQTSEYARATLEFSAARHRLPVDDVEEGVARRMERQQFLYRGDRRFHILIAEQALWTT
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHH
VGSVDVMAGQMDRLVAVSSLPRLILGIVPATAEIPMQTTNFVMFDDRLVTVETITAELKV
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEEEEEEEEEEE
TQPREVAMYAQAFELLAEQSVTGEKARALIVSVLERRRNH
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTNPHEAREALGRRLRELRRRAGLSGRGMAALVGWHESKVSKIEYGKLRPSDDDIRAYC
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCHHHHH
LHAGALDQLEDLLATLHNLDGAYMEMRRLLARGQGRSQAQLVRLAEETKHTRIFQNQVIP
HHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
GILQTSEYARATLEFSAARHRLPVDDVEEGVARRMERQQFLYRGDRRFHILIAEQALWTT
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHH
VGSVDVMAGQMDRLVAVSSLPRLILGIVPATAEIPMQTTNFVMFDDRLVTVETITAELKV
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEEEEEEEEEEEE
TQPREVAMYAQAFELLAEQSVTGEKARALIVSVLERRRNH
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA