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The map label for this gene is 54025861

Identifier: 54025861

GI number: 54025861

Start: 4104268

End: 4105584

Strand: Reverse

Name: 54025861

Synonym: nfa38910

Alternate gene names: NA

Gene position: 4105584-4104268 (Counterclockwise)

Preceding gene: 54025862

Following gene: 54025860

Centisome position: 68.19

GC content: 62.95

Gene sequence:

>1317_bases
ATGGCGCAAGTAGCGATGGAGCCCGGCGCGCTCCCGCCCCCGCACAAACTGAACCCCGTGAAAGTGGATGGGGTCTGGCG
GTTGGACCGGGTCCGCCACCGAGCATTCAATGGCGCCTACGTCCGCACCAGTGGCTCTGGGCGCACCAAGAGAGAGTGCC
TGGCCGATTGGCATCAGAACTTCGAACGTAACCGCCGCAAGGGTAGCTCGACCACTCGCGCCACCGGCAAGGAGGCGTTC
AAGGCCACGGACAAGATGGCGAAGGCGTTCGACGCCTACTATGCGCGGCAGCAGAAGAAGGCCGAGGCGGGGCAGATCAC
TGAACAGTCCCTGTTGACCTTCCATCGCGCGATCTATGTCGGCGACGGCCCGCTGGCGAAGCCGGATGCGTTGAAGCTGA
TGAAGACGCTGGGGGATTTGTCGATAGGGGAGGTGGGGAAGCCGTCGTTCCTGGCCGACTATCTGGAGAGTCTGGCTGAG
ACCTCTCCCGGGGTGGCTGGGCATCATTGGACGGTCCTGTCGGGAGTGTTCAAGTTCCTCACGTTGAGCAGTGACCTGTT
CGACTACAGCCCGATGCTGCCGGTGCCGCGGCCGGTGCAGGGTGGGGGTGGTCAGCGGGCGTTGACAGTGGAGGAGCGTG
AGCTGCTGTGCCCGGTGATCGGCGAGGGTCAGAAGCGGGCGCGTTATCTGCTGCCGATGGTGCTTCTGATCTTGGGGACG
GGCTTGCGGCCCGGGGAGGCGCTGGCGGTTCGCTGGTGTGATTTGCGCGGGTTGGAGGATGAATCTTTGCCGAACATCAC
CCTGCATGTGTGCGGCACGATGGTTGCGCGTAAGGGTGCGTACGTGCGTCAGCCGTACCGGAAGTCGGCGAAGAAGTCGA
AGGTGTCGAACGACTTCTATCTGGTGTTGCCCTGCTGGTTGACGATGGTGGTGCGGGCATGGTGGCGGATGGCGGGCGAG
GTTGAGGCTGATGCGCACATCTTTGTGAGCATGTTGGGGCAGGTAGTGCGGTTGAGCACTGCTGATAGCGCGTTGTTGAG
GGCTCGGCGCGGTTCGGAGTTGGAGTGGTTGCAGTTCGGGAATCTGCGGGATACGGCGGCCACGCATGTGGCCGGGGTGA
CGGGGGATCCGCGGAACGCAAGTGCTCAGTTGGGGCATGCGGAGGGGGTGACGGTGGCGATGCGGCACTATGTTGATGAC
CAGGGGTACACGCACCCGGCGGTGGACTTCTCGAAGGAGTTGGAGAGCTTGTGTCCGGCCAATCTTGGAGCAAAGTTGGA
ATCGGGTGCTGATCCGTTCGTTTGGAGTTGCTCGTGA

Upstream 100 bases:

>100_bases
GGTCGCCAACCGCTACCGGTACCTGGCCACGGACGTACAGGCGTGGCAGGAGCAGCGGCAGCGCGCGGCGGCGTGAGCTT
TCGGACTTCGAGGACGACAC

Downstream 100 bases:

>100_bases
GCTGCGAAGTAAGGTCTGAACTGTGCAGAGATGGCGAAGTCTCGACGATGTGCCCGCGGACTGGGGTCGGTGTGTGCTCA
CGATCGGTGTTTTCGACGGG

Product: putative phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MAQVAMEPGALPPPHKLNPVKVDGVWRLDRVRHRAFNGAYVRTSGSGRTKRECLADWHQNFERNRRKGSSTTRATGKEAF
KATDKMAKAFDAYYARQQKKAEAGQITEQSLLTFHRAIYVGDGPLAKPDALKLMKTLGDLSIGEVGKPSFLADYLESLAE
TSPGVAGHHWTVLSGVFKFLTLSSDLFDYSPMLPVPRPVQGGGGQRALTVEERELLCPVIGEGQKRARYLLPMVLLILGT
GLRPGEALAVRWCDLRGLEDESLPNITLHVCGTMVARKGAYVRQPYRKSAKKSKVSNDFYLVLPCWLTMVVRAWWRMAGE
VEADAHIFVSMLGQVVRLSTADSALLRARRGSELEWLQFGNLRDTAATHVAGVTGDPRNASAQLGHAEGVTVAMRHYVDD
QGYTHPAVDFSKELESLCPANLGAKLESGADPFVWSCS

Sequences:

>Translated_438_residues
MAQVAMEPGALPPPHKLNPVKVDGVWRLDRVRHRAFNGAYVRTSGSGRTKRECLADWHQNFERNRRKGSSTTRATGKEAF
KATDKMAKAFDAYYARQQKKAEAGQITEQSLLTFHRAIYVGDGPLAKPDALKLMKTLGDLSIGEVGKPSFLADYLESLAE
TSPGVAGHHWTVLSGVFKFLTLSSDLFDYSPMLPVPRPVQGGGGQRALTVEERELLCPVIGEGQKRARYLLPMVLLILGT
GLRPGEALAVRWCDLRGLEDESLPNITLHVCGTMVARKGAYVRQPYRKSAKKSKVSNDFYLVLPCWLTMVVRAWWRMAGE
VEADAHIFVSMLGQVVRLSTADSALLRARRGSELEWLQFGNLRDTAATHVAGVTGDPRNASAQLGHAEGVTVAMRHYVDD
QGYTHPAVDFSKELESLCPANLGAKLESGADPFVWSCS
>Mature_437_residues
AQVAMEPGALPPPHKLNPVKVDGVWRLDRVRHRAFNGAYVRTSGSGRTKRECLADWHQNFERNRRKGSSTTRATGKEAFK
ATDKMAKAFDAYYARQQKKAEAGQITEQSLLTFHRAIYVGDGPLAKPDALKLMKTLGDLSIGEVGKPSFLADYLESLAET
SPGVAGHHWTVLSGVFKFLTLSSDLFDYSPMLPVPRPVQGGGGQRALTVEERELLCPVIGEGQKRARYLLPMVLLILGTG
LRPGEALAVRWCDLRGLEDESLPNITLHVCGTMVARKGAYVRQPYRKSAKKSKVSNDFYLVLPCWLTMVVRAWWRMAGEV
EADAHIFVSMLGQVVRLSTADSALLRARRGSELEWLQFGNLRDTAATHVAGVTGDPRNASAQLGHAEGVTVAMRHYVDDQ
GYTHPAVDFSKELESLCPANLGAKLESGADPFVWSCS

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48176; Mature: 48045

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVAMEPGALPPPHKLNPVKVDGVWRLDRVRHRAFNGAYVRTSGSGRTKRECLADWHQN
CCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
FERNRRKGSSTTRATGKEAFKATDKMAKAFDAYYARQQKKAEAGQITEQSLLTFHRAIYV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEE
GDGPLAKPDALKLMKTLGDLSIGEVGKPSFLADYLESLAETSPGVAGHHWTVLSGVFKFL
CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
TLSSDLFDYSPMLPVPRPVQGGGGQRALTVEERELLCPVIGEGQKRARYLLPMVLLILGT
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
GLRPGEALAVRWCDLRGLEDESLPNITLHVCGTMVARKGAYVRQPYRKSAKKSKVSNDFY
CCCCCCEEEEEEECCCCCCCCCCCCEEHHHHHHHHHHCCCHHHCHHHHHHHHHHCCCCEE
LVLPCWLTMVVRAWWRMAGEVEADAHIFVSMLGQVVRLSTADSALLRARRGSELEWLQFG
EHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEECC
NLRDTAATHVAGVTGDPRNASAQLGHAEGVTVAMRHYVDDQGYTHPAVDFSKELESLCPA
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCC
NLGAKLESGADPFVWSCS
CCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
AQVAMEPGALPPPHKLNPVKVDGVWRLDRVRHRAFNGAYVRTSGSGRTKRECLADWHQN
CCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
FERNRRKGSSTTRATGKEAFKATDKMAKAFDAYYARQQKKAEAGQITEQSLLTFHRAIYV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEE
GDGPLAKPDALKLMKTLGDLSIGEVGKPSFLADYLESLAETSPGVAGHHWTVLSGVFKFL
CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
TLSSDLFDYSPMLPVPRPVQGGGGQRALTVEERELLCPVIGEGQKRARYLLPMVLLILGT
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
GLRPGEALAVRWCDLRGLEDESLPNITLHVCGTMVARKGAYVRQPYRKSAKKSKVSNDFY
CCCCCCEEEEEEECCCCCCCCCCCCEEHHHHHHHHHHCCCHHHCHHHHHHHHHHCCCCEE
LVLPCWLTMVVRAWWRMAGEVEADAHIFVSMLGQVVRLSTADSALLRARRGSELEWLQFG
EHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEECC
NLRDTAATHVAGVTGDPRNASAQLGHAEGVTVAMRHYVDDQGYTHPAVDFSKELESLCPA
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCC
NLGAKLESGADPFVWSCS
CCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA