| Definition | Nocardia farcinica IFM 10152 chromosome, complete genome. |
|---|---|
| Accession | NC_006361 |
| Length | 6,021,225 |
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The map label for this gene is 54025849
Identifier: 54025849
GI number: 54025849
Start: 4093249
End: 4093704
Strand: Reverse
Name: 54025849
Synonym: nfa38790
Alternate gene names: NA
Gene position: 4093704-4093249 (Counterclockwise)
Preceding gene: 54025850
Following gene: 54025845
Centisome position: 67.99
GC content: 69.74
Gene sequence:
>456_bases ATGGCGCGGCTGCTGATCGTCCACCACACCCCGTCCCCGCACTGCCAGGCCATGTTCGAGGCCGTGGTGTCCGGCGCCAC CGACCCGGAGATCGAGGGCGTGGAAGTGGTCCGCCGCCCCGCCCTGTCGGTGTCCCCGACCGACGTGCTGGAAGCCGACG GATACGTGCTCGGCACCCCCGCCAACCTCGGCTACATGAGCGGCGCCCTCAAACACGCCTTCGACACCGTCTACTACCCG TGCCTCGACGCGACCCGCGGCCGTCCGTTCGGGCTGTACCTGCACGGCAACGAGGGCACCGAGGGCGCGGAGAAGGGTGT CACCTCGATCACCACCGGGCTCGGGTGGGTGAAGGCAGCCGAGTACGTGGTGGTCTCGGGCAAGCCGTCCAAGGACGATC TCGAAGCGTGCTGGGAACTCGGCGCGACGGTGGCGGCGCAGCTCATGGGGGAGTGA
Upstream 100 bases:
>100_bases AGGGCCTACGACTACGCGGGCGACCGCACCCGCGCCCGCGAGACGATGCGGCGCGCGGTCGCCCTGGAACGTCTGGAACG CGAACAGAAGGGCTGACCCG
Downstream 100 bases:
>100_bases GCTGTCGGAGGTGAATCGGCCGGGGTCACTTCGCACCCCCCGTACGCCGCTCCAGTGCTCGCAGGATGAGCGCTCGGGCG GCGTCGTTGTAGACGGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Flavodoxin; Flavodoxin/Nitric Oxide Synthase; NADPH-Dependent FMN Reductase; Flavodoxin-Like Protein; NAD(P)H DehydrogenaseNADPH-Dependent FMN Reductase; Oxidoreductase; Flavoprotein; NAD(P)H Dehydrogenase
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MARLLIVHHTPSPHCQAMFEAVVSGATDPEIEGVEVVRRPALSVSPTDVLEADGYVLGTPANLGYMSGALKHAFDTVYYP CLDATRGRPFGLYLHGNEGTEGAEKGVTSITTGLGWVKAAEYVVVSGKPSKDDLEACWELGATVAAQLMGE
Sequences:
>Translated_151_residues MARLLIVHHTPSPHCQAMFEAVVSGATDPEIEGVEVVRRPALSVSPTDVLEADGYVLGTPANLGYMSGALKHAFDTVYYP CLDATRGRPFGLYLHGNEGTEGAEKGVTSITTGLGWVKAAEYVVVSGKPSKDDLEACWELGATVAAQLMGE >Mature_150_residues ARLLIVHHTPSPHCQAMFEAVVSGATDPEIEGVEVVRRPALSVSPTDVLEADGYVLGTPANLGYMSGALKHAFDTVYYPC LDATRGRPFGLYLHGNEGTEGAEKGVTSITTGLGWVKAAEYVVVSGKPSKDDLEACWELGATVAAQLMGE
Specific function: Unknown
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15963; Mature: 15832
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLLIVHHTPSPHCQAMFEAVVSGATDPEIEGVEVVRRPALSVSPTDVLEADGYVLGTP CCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCHHCCCCCEEEECC ANLGYMSGALKHAFDTVYYPCLDATRGRPFGLYLHGNEGTEGAEKGVTSITTGLGWVKAA CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHCHHHHHHHHHHHEEC EYVVVSGKPSKDDLEACWELGATVAAQLMGE CEEEEECCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARLLIVHHTPSPHCQAMFEAVVSGATDPEIEGVEVVRRPALSVSPTDVLEADGYVLGTP CEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCHHCCCCCEEEECC ANLGYMSGALKHAFDTVYYPCLDATRGRPFGLYLHGNEGTEGAEKGVTSITTGLGWVKAA CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHCHHHHHHHHHHHEEC EYVVVSGKPSKDDLEACWELGATVAAQLMGE CEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA