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The map label for this gene is uhpA [C]

Identifier: 54025844

GI number: 54025844

Start: 4089752

End: 4090411

Strand: Reverse

Name: uhpA [C]

Synonym: nfa38740

Alternate gene names: 54025844

Gene position: 4090411-4089752 (Counterclockwise)

Preceding gene: 54025845

Following gene: 54025843

Centisome position: 67.93

GC content: 72.42

Gene sequence:

>660_bases
GTGACGCGGCGGCGGATCGCGTTGGTCGAGGATCACGAGTCGGTGGCGATCGGGTTGGCGGCGATGCTGGCCGCGGAGCC
GGATCTGGAGTTGGTGCACACCGCGCGCACCGTGGCCGAACTGCTCGACGCCGTCGGCCCGTCGCCCGATCTGGATCTGT
GCGTGCTGGACCTGCGGCTGGCGGATTCCTCGCTGCCCGAGGACAACGTGCGCGCGCTGCGCGAGCGCGGGGTGGAGGTG
CTGGTGTTCACCGGCGCCGAGAACGCCTATCTGGTCCGATCGGCCGCCCGCGCGGGCGTGCTCGGTGTGTTGCGCAAATC
CGAGAGCGTGGCGACCGTCGTGGCGGCGGTGCGCCGGGCCGCGTCGGGGGAGCAGGTGGTGACCACCGACTGGGCCGCCG
CCATCGACGGTGATCCGGAGTTGTCCGGCGTCGGGCTCAGCCCGCGGCAGGAGGAAGTGCTCACGCTGTACGCCTCGGGG
GAGAAGGCGTCCCGGGTGGCGCGGCTGACCGGCCTGTCCGAGCAGACGGTGAACGACTACCTCGGGCGCATCCGCCAGAA
ATACGCCGACGCGGGCAGGCCGGCGCCCACCAAGACGGACCTCTACAAGCGCGCGGTCGAGGACGGCTGGCTGCCGGTGC
CCGAACGCGCGCGCGGATGA

Upstream 100 bases:

>100_bases
CAGATTCGTTCGTGAACGGTCATACTGCAACACGACGCCGGTTTCGATCGATGTCGCTCAGTGTGGTGACGATGGGAGTG
TGTCGGTGAATGCTGGTGAG

Downstream 100 bases:

>100_bases
TCGCCACCGTCGCGGATCGCGTCCCGGCGCGGCCCGCCGGCCCGCCCCGGGCCGGCGAGGCCGCCGCGGACCGGATCACG
CGGCGGCTGGCCCTGGCCGT

Product: putative two-component system response regulator

Products: NA

Alternate protein names: Two-Component System Response Regulator; Two Component Transcriptional Regulator LuxR Family; Two-Component Response Regulator; Response Regulator Receiver; Response Regulator Receiver Protein; Two-Component System Regulatory Protein; LuxR Family Two Component Transcriptional Regulator; NarL Family Two-Component Response Regulator; Transcription Regulator; LuxR Family Two-Component System Transcriptional Regulator; Two Component Response Regulator

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MTRRRIALVEDHESVAIGLAAMLAAEPDLELVHTARTVAELLDAVGPSPDLDLCVLDLRLADSSLPEDNVRALRERGVEV
LVFTGAENAYLVRSAARAGVLGVLRKSESVATVVAAVRRAASGEQVVTTDWAAAIDGDPELSGVGLSPRQEEVLTLYASG
EKASRVARLTGLSEQTVNDYLGRIRQKYADAGRPAPTKTDLYKRAVEDGWLPVPERARG

Sequences:

>Translated_219_residues
MTRRRIALVEDHESVAIGLAAMLAAEPDLELVHTARTVAELLDAVGPSPDLDLCVLDLRLADSSLPEDNVRALRERGVEV
LVFTGAENAYLVRSAARAGVLGVLRKSESVATVVAAVRRAASGEQVVTTDWAAAIDGDPELSGVGLSPRQEEVLTLYASG
EKASRVARLTGLSEQTVNDYLGRIRQKYADAGRPAPTKTDLYKRAVEDGWLPVPERARG
>Mature_218_residues
TRRRIALVEDHESVAIGLAAMLAAEPDLELVHTARTVAELLDAVGPSPDLDLCVLDLRLADSSLPEDNVRALRERGVEVL
VFTGAENAYLVRSAARAGVLGVLRKSESVATVVAAVRRAASGEQVVTTDWAAAIDGDPELSGVGLSPRQEEVLTLYASGE
KASRVARLTGLSEQTVNDYLGRIRQKYADAGRPAPTKTDLYKRAVEDGWLPVPERARG

Specific function: Appears To Be The Positive Activator Of Uhpt Transcription. [C]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790102, Length=208, Percent_Identity=27.8846153846154, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23466; Mature: 23335

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRRIALVEDHESVAIGLAAMLAAEPDLELVHTARTVAELLDAVGPSPDLDLCVLDLRL
CCCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
ADSSLPEDNVRALRERGVEVLVFTGAENAYLVRSAARAGVLGVLRKSESVATVVAAVRRA
CCCCCCHHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ASGEQVVTTDWAAAIDGDPELSGVGLSPRQEEVLTLYASGEKASRVARLTGLSEQTVNDY
CCCCEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHH
LGRIRQKYADAGRPAPTKTDLYKRAVEDGWLPVPERARG
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TRRRIALVEDHESVAIGLAAMLAAEPDLELVHTARTVAELLDAVGPSPDLDLCVLDLRL
CCCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
ADSSLPEDNVRALRERGVEVLVFTGAENAYLVRSAARAGVLGVLRKSESVATVVAAVRRA
CCCCCCHHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ASGEQVVTTDWAAAIDGDPELSGVGLSPRQEEVLTLYASGEKASRVARLTGLSEQTVNDY
CCCCEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHH
LGRIRQKYADAGRPAPTKTDLYKRAVEDGWLPVPERARG
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA