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The map label for this gene is 54025843

Identifier: 54025843

GI number: 54025843

Start: 4088517

End: 4089755

Strand: Reverse

Name: 54025843

Synonym: nfa38730

Alternate gene names: NA

Gene position: 4089755-4088517 (Counterclockwise)

Preceding gene: 54025844

Following gene: 54025842

Centisome position: 67.92

GC content: 76.11

Gene sequence:

>1239_bases
ATGATCGCCACCGTCGCGGATCGCGTCCCGGCGCGGCCCGCCGGCCCGCCCCGGGCCGGCGAGGCCGCCGCGGACCGGAT
CACGCGGCGGCTGGCCCTGGCCGTCGGCTTGGCGGGCACCATCGCCGCGGTACTGGACTTCCCGGAACTGCTCGAACATC
GGGAGGTCGCACCGGACTGGACGGCGGCGGCCGCGGTGCTGGCCTTCGTGCTGTTCCCGGTGCTGGCCGCGGTCTCGATC
GGCACGAACGTGCGGGTGGTGCGGCAGGTCGCCGGTGCACTGGCGACCTGCTACCTGGTGGCCGCGGCGGCGGTGTCGTT
CGCCTACGTCGAGCCGGAGCCCGAGCACACCGCCAGCTGGATGTTCCGGGTGTTCTCGCTGGGCGTGCTCGCGGCTTCGC
TGGCCTGGCGGCCGCCGGTGTCGATCGCCTATCTGCTCGGCGGCAACGTGCTGCTCGCGGTGGGCAACCTCGCGGTGGTC
GGGGACATGTCCGCGCTGTGGCATCTCGGGCTGCTGGCCCGCTCGACGGGCCTGTGCTCGCTGTTTCTGTGGTGCTCGAT
CTACGCGCAGGCCGGTGCGGCCCGGGTCGACCGGGAGACCGCCGAGGCGAGCGCGCGTGCCGCCCGGGCGGCGGGGGCGG
CGGCCCGCGACCGGGAACGTGCCCGGTTCGCCGCGTTGATCCACGACGCCGTGCTCTCGACCCTGCTGGACGCTTCCCGC
GCGGGCGCGAGTTCGCCGGTGCTGCGCGAGCAGGCCGCCCGCACCCTCGCCCAGCTCGACGGGTTGCGGGTCGGCAGTGG
CGGTTCCGAGCGCTTCGACGCCGATGCCGTCGCGGGTTTCCTGACCACGGCGGTGCGGGAGGTCGATCCGGGCATCGGGG
TGCTCGTGCGCAGGCCACCCGGCAGCGCGGCGCTGCGCATGCCCGTGGACGCGGCGGGCACGATGGCCGCCGCGGCCGCC
GAGGCGGTGCGCAACAGCGTGCGGCACGCCGGGGCCGGGGATCGGCCGGTGCACCGCGGGGTCACCGTGGAACTCGGCCC
GGCCGCGGCCCGGCTGGTCCTGCGGGACGACGGCGCGGGCTTCGACCCCGCCAAGGTGCCCGCCGACCGGCTCGGCGTCG
CGGTGAGCATCCTGGGCCGGATGCGCAGCCTGCCCGGCGGAGACGCCGAGCTGGCTTCGCGCCCCGGCCAGGGAACCACG
GTGACGCTGTCCTGGCACGACCCGGAGCAGACGCGATGA

Upstream 100 bases:

>100_bases
AGAAATACGCCGACGCGGGCAGGCCGGCGCCCACCAAGACGGACCTCTACAAGCGCGCGGTCGAGGACGGCTGGCTGCCG
GTGCCCGAACGCGCGCGCGG

Downstream 100 bases:

>100_bases
ACGCGGGCGCCGACACGGGATTGCGGGAACTGCTCGGCCTGCACGGCCGCAGCGCCTGGTACTTCCTGGCCATCCTGCAG
GCCACGCTGGGGCTGTACAG

Product: putative two-component system sensor kinase

Products: NA

Alternate protein names: Two-Component System Sensor Kinase; Signal Transduction Histidine Kinase

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MIATVADRVPARPAGPPRAGEAAADRITRRLALAVGLAGTIAAVLDFPELLEHREVAPDWTAAAAVLAFVLFPVLAAVSI
GTNVRVVRQVAGALATCYLVAAAAVSFAYVEPEPEHTASWMFRVFSLGVLAASLAWRPPVSIAYLLGGNVLLAVGNLAVV
GDMSALWHLGLLARSTGLCSLFLWCSIYAQAGAARVDRETAEASARAARAAGAAARDRERARFAALIHDAVLSTLLDASR
AGASSPVLREQAARTLAQLDGLRVGSGGSERFDADAVAGFLTTAVREVDPGIGVLVRRPPGSAALRMPVDAAGTMAAAAA
EAVRNSVRHAGAGDRPVHRGVTVELGPAAARLVLRDDGAGFDPAKVPADRLGVAVSILGRMRSLPGGDAELASRPGQGTT
VTLSWHDPEQTR

Sequences:

>Translated_412_residues
MIATVADRVPARPAGPPRAGEAAADRITRRLALAVGLAGTIAAVLDFPELLEHREVAPDWTAAAAVLAFVLFPVLAAVSI
GTNVRVVRQVAGALATCYLVAAAAVSFAYVEPEPEHTASWMFRVFSLGVLAASLAWRPPVSIAYLLGGNVLLAVGNLAVV
GDMSALWHLGLLARSTGLCSLFLWCSIYAQAGAARVDRETAEASARAARAAGAAARDRERARFAALIHDAVLSTLLDASR
AGASSPVLREQAARTLAQLDGLRVGSGGSERFDADAVAGFLTTAVREVDPGIGVLVRRPPGSAALRMPVDAAGTMAAAAA
EAVRNSVRHAGAGDRPVHRGVTVELGPAAARLVLRDDGAGFDPAKVPADRLGVAVSILGRMRSLPGGDAELASRPGQGTT
VTLSWHDPEQTR
>Mature_412_residues
MIATVADRVPARPAGPPRAGEAAADRITRRLALAVGLAGTIAAVLDFPELLEHREVAPDWTAAAAVLAFVLFPVLAAVSI
GTNVRVVRQVAGALATCYLVAAAAVSFAYVEPEPEHTASWMFRVFSLGVLAASLAWRPPVSIAYLLGGNVLLAVGNLAVV
GDMSALWHLGLLARSTGLCSLFLWCSIYAQAGAARVDRETAEASARAARAAGAAARDRERARFAALIHDAVLSTLLDASR
AGASSPVLREQAARTLAQLDGLRVGSGGSERFDADAVAGFLTTAVREVDPGIGVLVRRPPGSAALRMPVDAAGTMAAAAA
EAVRNSVRHAGAGDRPVHRGVTVELGPAAARLVLRDDGAGFDPAKVPADRLGVAVSILGRMRSLPGGDAELASRPGQGTT
VTLSWHDPEQTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42502; Mature: 42502

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATVADRVPARPAGPPRAGEAAADRITRRLALAVGLAGTIAAVLDFPELLEHREVAPDW
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCH
TAAAAVLAFVLFPVLAAVSIGTNVRVVRQVAGALATCYLVAAAAVSFAYVEPEPEHTASW
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHH
MFRVFSLGVLAASLAWRPPVSIAYLLGGNVLLAVGNLAVVGDMSALWHLGLLARSTGLCS
HHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCEEEEECHHHHHHHHHHHHHHHHHH
LFLWCSIYAQAGAARVDRETAEASARAARAAGAAARDRERARFAALIHDAVLSTLLDASR
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGASSPVLREQAARTLAQLDGLRVGSGGSERFDADAVAGFLTTAVREVDPGIGVLVRRPP
CCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC
GSAALRMPVDAAGTMAAAAAEAVRNSVRHAGAGDRPVHRGVTVELGPAAARLVLRDDGAG
CCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHEEEEEECCCCC
FDPAKVPADRLGVAVSILGRMRSLPGGDAELASRPGQGTTVTLSWHDPEQTR
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MIATVADRVPARPAGPPRAGEAAADRITRRLALAVGLAGTIAAVLDFPELLEHREVAPDW
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCH
TAAAAVLAFVLFPVLAAVSIGTNVRVVRQVAGALATCYLVAAAAVSFAYVEPEPEHTASW
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHH
MFRVFSLGVLAASLAWRPPVSIAYLLGGNVLLAVGNLAVVGDMSALWHLGLLARSTGLCS
HHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCEEEEECHHHHHHHHHHHHHHHHHH
LFLWCSIYAQAGAARVDRETAEASARAARAAGAAARDRERARFAALIHDAVLSTLLDASR
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGASSPVLREQAARTLAQLDGLRVGSGGSERFDADAVAGFLTTAVREVDPGIGVLVRRPP
CCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC
GSAALRMPVDAAGTMAAAAAEAVRNSVRHAGAGDRPVHRGVTVELGPAAARLVLRDDGAG
CCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHEEEEEECCCCC
FDPAKVPADRLGVAVSILGRMRSLPGGDAELASRPGQGTTVTLSWHDPEQTR
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA