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The map label for this gene is ycaQ [H]

Identifier: 54025841

GI number: 54025841

Start: 4086048

End: 4087307

Strand: Reverse

Name: ycaQ [H]

Synonym: nfa38710

Alternate gene names: 54025841

Gene position: 4087307-4086048 (Counterclockwise)

Preceding gene: 54025842

Following gene: 54025839

Centisome position: 67.88

GC content: 71.43

Gene sequence:

>1260_bases
ATGCGGAGGATGAGTGCGGCCGCGGCCCGGCGCACGGCGTTGGCGGCGCAGGGGTTCGGCAGGCGGCGGGGTGGCACGCC
GACGCGGCGCACGGTGCTCGATGTCCTCGGCAGAACTCAACTGCTGCAATTGGATTCGGTGTCGGCGGTGGTGCGGGCTC
ATTACGCGCCGGTGTTCAGCCGGATCGGCGGCTACGACCGGGGGTTGCTCGACGAGGCCGCGTGGAGTCATTCGGCGCGC
AAGCCGCGGCGGCTGGTCGAGTACTGGGCGCACGAGGCGGCGCTGATCCCGGTCGCGGACTGGCCGCTGATGCGGTGGCG
GATGGAGAAGTACCGGCACGGCCGCTGGGCGGGCATGCGGCGGGCGCTCGAACGCAATCCCACCCTCGGCAACGACATCC
TCGACGTGATCCGCGAGGCGGGCGCCTGCACCGCGGGCGAGGTGGAGCGCCATCTGGAGCTGGATCGTCCGCGCCCCAAG
GGGTCGTGGTGGAATCTCAGCGACACCAAGCTCGTCTGCGAGCAGCTCTTCGCCGCCGGTGAGCTGTCCGTCGACCGCCG
CGTCGGCTTCAGCCGGTACTACGACCTCACCGAACGGGTGGTACCGCCGGAGGTGTCGGCTCGCTCGGTGCCGCAGGACG
AGGCCGTGCGGGAGCTGATTCTCCGGTCCGCGACCGCCCTCGGCGTCGCCACCGAGACCGACCTGCGCGACTACTACCGG
CTGCACCGCTCGCAGAGCGCACCGGCGATCGCGGATCTGGTGGACGCGGGTGAGCTCGAGCCGGTGACGGTGACTGGCTG
GGACAAACCCGCCTATCTGCGCGCCGGCGCGGTGACGCCGCGGAAGGTCGAGGGCGCCGCCCTGCTGTGTCCGTTCGACC
CGCTGATCTTCTTCCGGCCGCGCACCGAGCGGGTCTTCGACTTCCATTACCGCATCGAGATCTACACGCCCGAACCCCAA
CGGGTGTACGGCTATTACGTTTTCCCGTTCCTGCTGGACGATCAGCTCGTGGGCCGGGTCGATCTGCGCGCCGAGCGGGC
GGCGGGCCGGTTGCTGGTGCCCGGCGCGTTCGTGGAGCCCGGCCACGACCCGGTGCGGGTGGCCGCCGCGCTGGCCGGAT
CGTTGCGCGAAATGGCGGACTGGCTGGAACTCGACGACGTGGTGATCGGCGAGCGCGGCGATCTCGCCGCCGAGCTCGCC
GCGGCTCAGCCTTCCCGCTCGGGGTTGTCGCGGCCCGGGGTGTCGCGCCTGGTGCCGTAG

Upstream 100 bases:

>100_bases
CGGAGTGTGGCCGTGGAGGCCGCCGCGCTCAGGCGAATTCGGACTGAGCCTGAGCGGGTCGGCGGCCGGTCGTGTCGGTG
CCGCATGGCACAGTGCGGGT

Downstream 100 bases:

>100_bases
CTGCGCATCTGCTCGCGGAGCGCGCCGTCCACGGCGCGGGAGAGCCAGGAGTTCAGCGAGACGCCGCTGGCGGCGGCGGC
CTCCTCGGCCTTGGCCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MRRMSAAAARRTALAAQGFGRRRGGTPTRRTVLDVLGRTQLLQLDSVSAVVRAHYAPVFSRIGGYDRGLLDEAAWSHSAR
KPRRLVEYWAHEAALIPVADWPLMRWRMEKYRHGRWAGMRRALERNPTLGNDILDVIREAGACTAGEVERHLELDRPRPK
GSWWNLSDTKLVCEQLFAAGELSVDRRVGFSRYYDLTERVVPPEVSARSVPQDEAVRELILRSATALGVATETDLRDYYR
LHRSQSAPAIADLVDAGELEPVTVTGWDKPAYLRAGAVTPRKVEGAALLCPFDPLIFFRPRTERVFDFHYRIEIYTPEPQ
RVYGYYVFPFLLDDQLVGRVDLRAERAAGRLLVPGAFVEPGHDPVRVAAALAGSLREMADWLELDDVVIGERGDLAAELA
AAQPSRSGLSRPGVSRLVP

Sequences:

>Translated_419_residues
MRRMSAAAARRTALAAQGFGRRRGGTPTRRTVLDVLGRTQLLQLDSVSAVVRAHYAPVFSRIGGYDRGLLDEAAWSHSAR
KPRRLVEYWAHEAALIPVADWPLMRWRMEKYRHGRWAGMRRALERNPTLGNDILDVIREAGACTAGEVERHLELDRPRPK
GSWWNLSDTKLVCEQLFAAGELSVDRRVGFSRYYDLTERVVPPEVSARSVPQDEAVRELILRSATALGVATETDLRDYYR
LHRSQSAPAIADLVDAGELEPVTVTGWDKPAYLRAGAVTPRKVEGAALLCPFDPLIFFRPRTERVFDFHYRIEIYTPEPQ
RVYGYYVFPFLLDDQLVGRVDLRAERAAGRLLVPGAFVEPGHDPVRVAAALAGSLREMADWLELDDVVIGERGDLAAELA
AAQPSRSGLSRPGVSRLVP
>Mature_419_residues
MRRMSAAAARRTALAAQGFGRRRGGTPTRRTVLDVLGRTQLLQLDSVSAVVRAHYAPVFSRIGGYDRGLLDEAAWSHSAR
KPRRLVEYWAHEAALIPVADWPLMRWRMEKYRHGRWAGMRRALERNPTLGNDILDVIREAGACTAGEVERHLELDRPRPK
GSWWNLSDTKLVCEQLFAAGELSVDRRVGFSRYYDLTERVVPPEVSARSVPQDEAVRELILRSATALGVATETDLRDYYR
LHRSQSAPAIADLVDAGELEPVTVTGWDKPAYLRAGAVTPRKVEGAALLCPFDPLIFFRPRTERVFDFHYRIEIYTPEPQ
RVYGYYVFPFLLDDQLVGRVDLRAERAAGRLLVPGAFVEPGHDPVRVAAALAGSLREMADWLELDDVVIGERGDLAAELA
AAQPSRSGLSRPGVSRLVP

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=408, Percent_Identity=34.5588235294118, Blast_Score=186, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 46912; Mature: 46912

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRMSAAAARRTALAAQGFGRRRGGTPTRRTVLDVLGRTQLLQLDSVSAVVRAHYAPVFS
CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHH
RIGGYDRGLLDEAAWSHSARKPRRLVEYWAHEAALIPVADWPLMRWRMEKYRHGRWAGMR
HCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCHHHHHH
RALERNPTLGNDILDVIREAGACTAGEVERHLELDRPRPKGSWWNLSDTKLVCEQLFAAG
HHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC
ELSVDRRVGFSRYYDLTERVVPPEVSARSVPQDEAVRELILRSATALGVATETDLRDYYR
CCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LHRSQSAPAIADLVDAGELEPVTVTGWDKPAYLRAGAVTPRKVEGAALLCPFDPLIFFRP
HHHCCCCCHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCEECCCEEEECCCCEEEECC
RTERVFDFHYRIEIYTPEPQRVYGYYVFPFLLDDQLVGRVDLRAERAAGRLLVPGAFVEP
CCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHCCCCEECCCCCCCC
GHDPVRVAAALAGSLREMADWLELDDVVIGERGDLAAELAAAQPSRSGLSRPGVSRLVP
CCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MRRMSAAAARRTALAAQGFGRRRGGTPTRRTVLDVLGRTQLLQLDSVSAVVRAHYAPVFS
CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHHH
RIGGYDRGLLDEAAWSHSARKPRRLVEYWAHEAALIPVADWPLMRWRMEKYRHGRWAGMR
HCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCHHHHHH
RALERNPTLGNDILDVIREAGACTAGEVERHLELDRPRPKGSWWNLSDTKLVCEQLFAAG
HHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC
ELSVDRRVGFSRYYDLTERVVPPEVSARSVPQDEAVRELILRSATALGVATETDLRDYYR
CCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LHRSQSAPAIADLVDAGELEPVTVTGWDKPAYLRAGAVTPRKVEGAALLCPFDPLIFFRP
HHHCCCCCHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCCEECCCEEEECCCCEEEECC
RTERVFDFHYRIEIYTPEPQRVYGYYVFPFLLDDQLVGRVDLRAERAAGRLLVPGAFVEP
CCCCEEEEEEEEEEECCCCCEEEEEEEEEEECCCHHHHHHHHHHHHCCCCEECCCCCCCC
GHDPVRVAAALAGSLREMADWLELDDVVIGERGDLAAELAAAQPSRSGLSRPGVSRLVP
CCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]