Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54025689

Identifier: 54025689

GI number: 54025689

Start: 3935401

End: 3936333

Strand: Reverse

Name: 54025689

Synonym: nfa37190

Alternate gene names: NA

Gene position: 3936333-3935401 (Counterclockwise)

Preceding gene: 54025691

Following gene: 54025687

Centisome position: 65.37

GC content: 71.06

Gene sequence:

>933_bases
ATGGGTTGCGGGCGCCGGGCGGTGCTCGCCGAACTCGGCATCGGAGAGGCCGCCGACGCGGCGCGCGGCACCGCGATAGG
CAGGTCCCAGTACAGCTGCCGCTGCCCGGGATGCGCGGACGCCCAATGGGATGTGCAGCGGCTCAAATACTGGCTGTGCG
CGCGGCTGGTCGAGTTCGGCGCCGACGAGGCGGAGGTGGATCAGCGCATCGGCGGCATCCTGGTCGACGTCCGGTGGCGG
CGCGGCGACCGCTGGTACGCCATCGAGGTCCGCAGCGGCGCCCTGGAGTGCACCCTGGCCCGCGAGCACACCGACCGGTT
GCGCGCCGCGGGCTGCGCGGGCGTGCTGTGGTTGTGCCCGCCGGGCTACTGGGTGCGGCATCTGCCCGCGCTCGGTGTCG
CCGACCTCGGCCCGGACGCCTGCGACTACCTGATCGACACCGGCATGCTCGACACCGACCAGTGCGGGCTGGCCGCACCC
CGGCGCACGCCCTTCGAGCTGCGGGAGTTCCTGCGCGGGTGGGTGTCCGGCGATATCGTCTGGGGCTATCGCGACGAGAA
CACCGGAGGTTGGGCGCGCGTGATCGACTGGGAGCAGCACACCAGGTCGCAGGCAACCATCATCGCCCGGCAACGTCAGG
AGCTGGTCAATCAGCGGACGGCGCTGGCGGTGTCGCGCACGCTGGTGCGGGACAAGCAGAAGCAGATCGCGAAACTGCAC
TGGCGGCTCGACCGCGCCGAGCAGAAGGCCCAGGAACAGGCCGACGCGGTCGCCGCGGTCAATCGCGCCCTCGCCGAGCG
GCACCGGGTCGAGGACAGCCTGCGCGCCACCATCAAGGGCCTCAACCGCACGATCGAACACTGGCAGCTGATCACCATCT
GCGCGATGCTGCTGATCGTGACGTTCCTGGCCGCGGCGATGATCGTCCGCTGA

Upstream 100 bases:

>100_bases
GCGCGCAAAGTTAGGAGCACTCTGGATTCCATGGAGTAGGTCGCGAGACCGGCGTGTCGGGTAGGGGAGTGATCGCGTGC
GGACCAAGCAGCGGACGGAG

Downstream 100 bases:

>100_bases
CCGGCTCGGTCAGTCCCCGGTCGGCGGCGGCGCGCTCAGCCGGAACGGGGCACGGTCCCACCGCCAGCCGTGGCGCAGGG
TGAGAGCCGCGAGGTCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MGCGRRAVLAELGIGEAADAARGTAIGRSQYSCRCPGCADAQWDVQRLKYWLCARLVEFGADEAEVDQRIGGILVDVRWR
RGDRWYAIEVRSGALECTLAREHTDRLRAAGCAGVLWLCPPGYWVRHLPALGVADLGPDACDYLIDTGMLDTDQCGLAAP
RRTPFELREFLRGWVSGDIVWGYRDENTGGWARVIDWEQHTRSQATIIARQRQELVNQRTALAVSRTLVRDKQKQIAKLH
WRLDRAEQKAQEQADAVAAVNRALAERHRVEDSLRATIKGLNRTIEHWQLITICAMLLIVTFLAAAMIVR

Sequences:

>Translated_310_residues
MGCGRRAVLAELGIGEAADAARGTAIGRSQYSCRCPGCADAQWDVQRLKYWLCARLVEFGADEAEVDQRIGGILVDVRWR
RGDRWYAIEVRSGALECTLAREHTDRLRAAGCAGVLWLCPPGYWVRHLPALGVADLGPDACDYLIDTGMLDTDQCGLAAP
RRTPFELREFLRGWVSGDIVWGYRDENTGGWARVIDWEQHTRSQATIIARQRQELVNQRTALAVSRTLVRDKQKQIAKLH
WRLDRAEQKAQEQADAVAAVNRALAERHRVEDSLRATIKGLNRTIEHWQLITICAMLLIVTFLAAAMIVR
>Mature_309_residues
GCGRRAVLAELGIGEAADAARGTAIGRSQYSCRCPGCADAQWDVQRLKYWLCARLVEFGADEAEVDQRIGGILVDVRWRR
GDRWYAIEVRSGALECTLAREHTDRLRAAGCAGVLWLCPPGYWVRHLPALGVADLGPDACDYLIDTGMLDTDQCGLAAPR
RTPFELREFLRGWVSGDIVWGYRDENTGGWARVIDWEQHTRSQATIIARQRQELVNQRTALAVSRTLVRDKQKQIAKLHW
RLDRAEQKAQEQADAVAAVNRALAERHRVEDSLRATIKGLNRTIEHWQLITICAMLLIVTFLAAAMIVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34829; Mature: 34698

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCGRRAVLAELGIGEAADAARGTAIGRSQYSCRCPGCADAQWDVQRLKYWLCARLVEFG
CCCCHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
ADEAEVDQRIGGILVDVRWRRGDRWYAIEVRSGALECTLAREHTDRLRAAGCAGVLWLCP
CCHHHHHHHHCCEEEEEEEECCCEEEEEEEECCCEEEEEHHHHHHHHHHHCCCCEEEECC
PGYWVRHLPALGVADLGPDACDYLIDTGMLDTDQCGLAAPRRTPFELREFLRGWVSGDIV
CCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE
WGYRDENTGGWARVIDWEQHTRSQATIIARQRQELVNQRTALAVSRTLVRDKQKQIAKLH
EEEEECCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRLDRAEQKAQEQADAVAAVNRALAERHRVEDSLRATIKGLNRTIEHWQLITICAMLLIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFLAAAMIVR
HHHHHHHHCC
>Mature Secondary Structure 
GCGRRAVLAELGIGEAADAARGTAIGRSQYSCRCPGCADAQWDVQRLKYWLCARLVEFG
CCCHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
ADEAEVDQRIGGILVDVRWRRGDRWYAIEVRSGALECTLAREHTDRLRAAGCAGVLWLCP
CCHHHHHHHHCCEEEEEEEECCCEEEEEEEECCCEEEEEHHHHHHHHHHHCCCCEEEECC
PGYWVRHLPALGVADLGPDACDYLIDTGMLDTDQCGLAAPRRTPFELREFLRGWVSGDIV
CCHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEE
WGYRDENTGGWARVIDWEQHTRSQATIIARQRQELVNQRTALAVSRTLVRDKQKQIAKLH
EEEEECCCCCEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRLDRAEQKAQEQADAVAAVNRALAERHRVEDSLRATIKGLNRTIEHWQLITICAMLLIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFLAAAMIVR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA