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The map label for this gene is yvdB [H]

Identifier: 54025685

GI number: 54025685

Start: 3929072

End: 3931318

Strand: Reverse

Name: yvdB [H]

Synonym: nfa37150

Alternate gene names: 54025685

Gene position: 3931318-3929072 (Counterclockwise)

Preceding gene: 54025687

Following gene: 54025684

Centisome position: 65.29

GC content: 71.16

Gene sequence:

>2247_bases
ATGGCTGTACTGAGCGATCACGCGCCCCCCTCGTCCCCGGCCCCCGCGGAAGGAGGTCCGGCGGCAGGCCGCGGAAAACT
GGTTTCGATTGTGCGCCACGATCTTCCGGCCTCCATCGTGGTCTTCCTCGTCGCGCTGCCGCTCTCGCTCGGCATCGCGC
TGGCCTCCGGCGCCCCGGTCGCGGCCGGACTCATCGCCGCCGTCGTCGGCGGCATCGTGGTGGGCTGCCTGGGCGGCTCC
GTCCTGCAGGTGAGCGGCCCCGCGGCCGGGCTCACCGTCGTCGTCGCCGAGTCGATCGCCCAATTCGGCTGGCGCGTCAC
CTGTTTCATCGTCGTCGCGGCCGGTGCGCTGCAGATCCTGTTCGGGCTGAGCCGGATCGCGCGCGCCGCGCTCGCCGTGG
CGCCGGTGGTGGTGCACGCCATGCTGGCGGGCATCGGCGTCACGATCGCCCTGCAGCAGGTGCACGTGTTGCTCGGCGGG
TCGTCACACAGTTCGGCGTGGCACAACATCACCGCGCTGCCCGGCCGGCTCACGTCGATGAACACCGGCGCCGCACTGGT
GGGCGTGCTGGTCGTGGCGGTGATGCTGGGCTGGAAGTATCTGCCGGAGAAGGTCCGGGTGGTGCCCGGCCCGCTGGTGG
CCGTGGTCGCGGCCACCGTGCTGTCGCTGGTGCTGCCGCTGGACGTGGAGCGGATCGTGCTGAGCAGCTCGCTGTTCGAG
GCGATCGAACTGCCGCAGATCCCCGACGGCGGCTGGGCCCCGGTGGCGCTGATGGTGCTGACCATCGCGCTGATCGCCAG
CGTGGAGAGCCTGCTCTCGGCGGTGGCCGTGGACAAGATGCACTCCGGGCCGCGTACGAACTTCGACCGGGAGCTGGTCG
GCCAGGGCTCGGCCAACATGCTCTCGGGCATGCTCGGCGGCCTGCCGGTGACCGGTGTGATCGTGCGGAGCGCGACCAAC
GTGCAGGCCGGGGCGCGCAGCCGGGCCTCGGCGGTGCTGCACGGGGTGTGGTTGCTGTTGTTCTCGGTGGCGCTGGTCGG
GGTGGTCGAGCAGATCCCCAAGGCCGCACTGGCCGGTCTGCTCATCGTCATCGGCATCCAGCTGGTCAAGATCGCCCACA
TCAAGCTCGCCAGCCGCACCGGCGATCTGCTCGTCTACGCCGTCACGATCCTCGGCGTGGTCTTCCTCAACCTGCTCGAG
GGCGTGATCATCGGCCTGGTGCTGGCCTTCGCGCTGCTGCTGTGGCGGGTGGTGCGGGTGACGATCGTGGCCGAGCAGAT
ACCGCAGTCGCAGCGCTGGCTGGTGCGCATCGACGGCTCGTGCACCTTCCTCGCCCTGCCGCGACTGTCCGGCGAACTGG
CGAAGGTGCCTGCCGGCGCCGACGTGACCGTGGAGATGACCGTCGACTTCCTCGATCACGCCGCGCTCGAGGCGTTGCAG
GACTGGGTGCGCCAGCAGGAAAGCGGCGGCGGCAGCGTCGAATTCGTCGAGATCGGCAGCGTGCGCATGGCCGACGCGCT
GGCCGGACCGCCCGCCCGCGGATTCGCCAGGGCGATGTGGGAGGAGATCCTCGGGCCCTGGCGGCGCGACGAGAAGCACC
TGGACCCGGTGACCGCGGGGGTGGCGGCCTACCACCGCAGCCACGCGCACGTCGTCCGCCGCCACCTGGACGAGCTCGTC
CACCGGCAGGACCCGGACTCGTTCTTCCTCACCTGCTCGGACTCGCGCATCGTCCCGAACGTCATCACCAACAGCGGACC
CGGCGACCTGTTCACCGTGCGCAACGTCGGCAATCTGGTCCCCGCCACCGGCGACGCCTCGGTGGAGGCGGCGCTGGTCT
TCGCCCTGGAGGAGCTGAACGTGCGCTGCGTGGTGGTGTGCGGGCACTCCAGCTGTGGAGCCATGGGCGCGCTGTACGGC
GGCGGCGACGCCGCACCGGGCATCGAGCCGTGGCTGGCGCACGCGCGACCGAGCCTGGAACGCTTCCGGGCCGGGCATCC
GGTGGCCGAGGCGGCGCGTGCGGCCGGATTCGGTGAGGTCGACCAGTTGAGCATGGTGAACGTCGCGGTGCAGTTGGAGA
CGTTGCAGCGCCATCCCGCCGTGCGGCGCGCGGTCGCCGAACGCGGGGTCACCGTCGCCGGGCTGTTCTTCGACATCGCG
AGCGCGCGGGTCGTGGAGATCACCGCCGACGGGATCGTCCACATCGACGAGGCTCGCGGGCGTCGTCAGGTGCCGGAGCC
GGTCTGA

Upstream 100 bases:

>100_bases
TGCCGGTTCGCGGTCAATTGCCCTGCTGGACAAGTCGATCGTCAACCGACCTCGGCCGGCGCGTCACCTGGCGCCGGGCG
AGTCGGCGAAGGAGAAAATC

Downstream 100 bases:

>100_bases
ATCTCTAGGCTGGCGCTGTGAGCAGCGAGCTGGACCAGCAGACCGGGTCGGCGCCGATGGACCGCCTGCGCGCCTTCCGC
GCGCGGGTGGCCGCCCGGCC

Product: putative transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 748; Mature: 747

Protein sequence:

>748_residues
MAVLSDHAPPSSPAPAEGGPAAGRGKLVSIVRHDLPASIVVFLVALPLSLGIALASGAPVAAGLIAAVVGGIVVGCLGGS
VLQVSGPAAGLTVVVAESIAQFGWRVTCFIVVAAGALQILFGLSRIARAALAVAPVVVHAMLAGIGVTIALQQVHVLLGG
SSHSSAWHNITALPGRLTSMNTGAALVGVLVVAVMLGWKYLPEKVRVVPGPLVAVVAATVLSLVLPLDVERIVLSSSLFE
AIELPQIPDGGWAPVALMVLTIALIASVESLLSAVAVDKMHSGPRTNFDRELVGQGSANMLSGMLGGLPVTGVIVRSATN
VQAGARSRASAVLHGVWLLLFSVALVGVVEQIPKAALAGLLIVIGIQLVKIAHIKLASRTGDLLVYAVTILGVVFLNLLE
GVIIGLVLAFALLLWRVVRVTIVAEQIPQSQRWLVRIDGSCTFLALPRLSGELAKVPAGADVTVEMTVDFLDHAALEALQ
DWVRQQESGGGSVEFVEIGSVRMADALAGPPARGFARAMWEEILGPWRRDEKHLDPVTAGVAAYHRSHAHVVRRHLDELV
HRQDPDSFFLTCSDSRIVPNVITNSGPGDLFTVRNVGNLVPATGDASVEAALVFALEELNVRCVVVCGHSSCGAMGALYG
GGDAAPGIEPWLAHARPSLERFRAGHPVAEAARAAGFGEVDQLSMVNVAVQLETLQRHPAVRRAVAERGVTVAGLFFDIA
SARVVEITADGIVHIDEARGRRQVPEPV

Sequences:

>Translated_748_residues
MAVLSDHAPPSSPAPAEGGPAAGRGKLVSIVRHDLPASIVVFLVALPLSLGIALASGAPVAAGLIAAVVGGIVVGCLGGS
VLQVSGPAAGLTVVVAESIAQFGWRVTCFIVVAAGALQILFGLSRIARAALAVAPVVVHAMLAGIGVTIALQQVHVLLGG
SSHSSAWHNITALPGRLTSMNTGAALVGVLVVAVMLGWKYLPEKVRVVPGPLVAVVAATVLSLVLPLDVERIVLSSSLFE
AIELPQIPDGGWAPVALMVLTIALIASVESLLSAVAVDKMHSGPRTNFDRELVGQGSANMLSGMLGGLPVTGVIVRSATN
VQAGARSRASAVLHGVWLLLFSVALVGVVEQIPKAALAGLLIVIGIQLVKIAHIKLASRTGDLLVYAVTILGVVFLNLLE
GVIIGLVLAFALLLWRVVRVTIVAEQIPQSQRWLVRIDGSCTFLALPRLSGELAKVPAGADVTVEMTVDFLDHAALEALQ
DWVRQQESGGGSVEFVEIGSVRMADALAGPPARGFARAMWEEILGPWRRDEKHLDPVTAGVAAYHRSHAHVVRRHLDELV
HRQDPDSFFLTCSDSRIVPNVITNSGPGDLFTVRNVGNLVPATGDASVEAALVFALEELNVRCVVVCGHSSCGAMGALYG
GGDAAPGIEPWLAHARPSLERFRAGHPVAEAARAAGFGEVDQLSMVNVAVQLETLQRHPAVRRAVAERGVTVAGLFFDIA
SARVVEITADGIVHIDEARGRRQVPEPV
>Mature_747_residues
AVLSDHAPPSSPAPAEGGPAAGRGKLVSIVRHDLPASIVVFLVALPLSLGIALASGAPVAAGLIAAVVGGIVVGCLGGSV
LQVSGPAAGLTVVVAESIAQFGWRVTCFIVVAAGALQILFGLSRIARAALAVAPVVVHAMLAGIGVTIALQQVHVLLGGS
SHSSAWHNITALPGRLTSMNTGAALVGVLVVAVMLGWKYLPEKVRVVPGPLVAVVAATVLSLVLPLDVERIVLSSSLFEA
IELPQIPDGGWAPVALMVLTIALIASVESLLSAVAVDKMHSGPRTNFDRELVGQGSANMLSGMLGGLPVTGVIVRSATNV
QAGARSRASAVLHGVWLLLFSVALVGVVEQIPKAALAGLLIVIGIQLVKIAHIKLASRTGDLLVYAVTILGVVFLNLLEG
VIIGLVLAFALLLWRVVRVTIVAEQIPQSQRWLVRIDGSCTFLALPRLSGELAKVPAGADVTVEMTVDFLDHAALEALQD
WVRQQESGGGSVEFVEIGSVRMADALAGPPARGFARAMWEEILGPWRRDEKHLDPVTAGVAAYHRSHAHVVRRHLDELVH
RQDPDSFFLTCSDSRIVPNVITNSGPGDLFTVRNVGNLVPATGDASVEAALVFALEELNVRCVVVCGHSSCGAMGALYGG
GDAAPGIEPWLAHARPSLERFRAGHPVAEAARAAGFGEVDQLSMVNVAVQLETLQRHPAVRRAVAERGVTVAGLFFDIAS
ARVVEITADGIVHIDEARGRRQVPEPV

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Escherichia coli, GI87081859, Length=492, Percent_Identity=28.0487804878049, Blast_Score=129, Evalue=5e-31,
Organism=Escherichia coli, GI1786534, Length=175, Percent_Identity=37.1428571428571, Blast_Score=110, Evalue=5e-25,
Organism=Escherichia coli, GI1786318, Length=178, Percent_Identity=29.7752808988764, Blast_Score=67, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI25147564, Length=246, Percent_Identity=26.8292682926829, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI115532990, Length=226, Percent_Identity=24.7787610619469, Blast_Score=79, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6325260, Length=452, Percent_Identity=22.787610619469, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24645213, Length=240, Percent_Identity=25.4166666666667, Blast_Score=86, Evalue=8e-17,
Organism=Drosophila melanogaster, GI85815873, Length=459, Percent_Identity=23.7472766884532, Blast_Score=77, Evalue=5e-14,
Organism=Drosophila melanogaster, GI19922482, Length=514, Percent_Identity=23.3463035019455, Blast_Score=75, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 77813; Mature: 77682

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLSDHAPPSSPAPAEGGPAAGRGKLVSIVRHDLPASIVVFLVALPLSLGIALASGAPV
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCH
AAGLIAAVVGGIVVGCLGGSVLQVSGPAAGLTVVVAESIAQFGWRVTCFIVVAAGALQIL
HHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FGLSRIARAALAVAPVVVHAMLAGIGVTIALQQVHVLLGGSSHSSAWHNITALPGRLTSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC
NTGAALVGVLVVAVMLGWKYLPEKVRVVPGPLVAVVAATVLSLVLPLDVERIVLSSSLFE
CCHHHHHHHHHHHHHHCCHHCCCHHEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AIELPQIPDGGWAPVALMVLTIALIASVESLLSAVAVDKMHSGPRTNFDRELVGQGSANM
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHH
LSGMLGGLPVTGVIVRSATNVQAGARSRASAVLHGVWLLLFSVALVGVVEQIPKAALAGL
HHHHHCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIVIGIQLVKIAHIKLASRTGDLLVYAVTILGVVFLNLLEGVIIGLVLAFALLLWRVVRV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIVAEQIPQSQRWLVRIDGSCTFLALPRLSGELAKVPAGADVTVEMTVDFLDHAALEALQ
HHHHHHCCCCCCEEEEECCCEEEEECCCCCCCHHCCCCCCCEEEEEEHHHHHHHHHHHHH
DWVRQQESGGGSVEFVEIGSVRMADALAGPPARGFARAMWEEILGPWRRDEKHLDPVTAG
HHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHCCHHHHH
VAAYHRSHAHVVRRHLDELVHRQDPDSFFLTCSDSRIVPNVITNSGPGDLFTVRNVGNLV
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCCCCEEEECCCCCCC
PATGDASVEAALVFALEELNVRCVVVCGHSSCGAMGALYGGGDAAPGIEPWLAHARPSLE
CCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH
RFRAGHPVAEAARAAGFGEVDQLSMVNVAVQLETLQRHPAVRRAVAERGVTVAGLFFDIA
HHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCEEEHHHHHHC
SARVVEITADGIVHIDEARGRRQVPEPV
CCEEEEEECCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
AVLSDHAPPSSPAPAEGGPAAGRGKLVSIVRHDLPASIVVFLVALPLSLGIALASGAPV
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCH
AAGLIAAVVGGIVVGCLGGSVLQVSGPAAGLTVVVAESIAQFGWRVTCFIVVAAGALQIL
HHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FGLSRIARAALAVAPVVVHAMLAGIGVTIALQQVHVLLGGSSHSSAWHNITALPGRLTSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCC
NTGAALVGVLVVAVMLGWKYLPEKVRVVPGPLVAVVAATVLSLVLPLDVERIVLSSSLFE
CCHHHHHHHHHHHHHHCCHHCCCHHEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AIELPQIPDGGWAPVALMVLTIALIASVESLLSAVAVDKMHSGPRTNFDRELVGQGSANM
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHH
LSGMLGGLPVTGVIVRSATNVQAGARSRASAVLHGVWLLLFSVALVGVVEQIPKAALAGL
HHHHHCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIVIGIQLVKIAHIKLASRTGDLLVYAVTILGVVFLNLLEGVIIGLVLAFALLLWRVVRV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TIVAEQIPQSQRWLVRIDGSCTFLALPRLSGELAKVPAGADVTVEMTVDFLDHAALEALQ
HHHHHHCCCCCCEEEEECCCEEEEECCCCCCCHHCCCCCCCEEEEEEHHHHHHHHHHHHH
DWVRQQESGGGSVEFVEIGSVRMADALAGPPARGFARAMWEEILGPWRRDEKHLDPVTAG
HHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHCCHHHHH
VAAYHRSHAHVVRRHLDELVHRQDPDSFFLTCSDSRIVPNVITNSGPGDLFTVRNVGNLV
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCCCCEEEECCCCCCC
PATGDASVEAALVFALEELNVRCVVVCGHSSCGAMGALYGGGDAAPGIEPWLAHARPSLE
CCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHH
RFRAGHPVAEAARAAGFGEVDQLSMVNVAVQLETLQRHPAVRRAVAERGVTVAGLFFDIA
HHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCEEEHHHHHHC
SARVVEITADGIVHIDEARGRRQVPEPV
CCEEEEEECCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]