Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54025650

Identifier: 54025650

GI number: 54025650

Start: 3895407

End: 3896282

Strand: Reverse

Name: 54025650

Synonym: nfa36800

Alternate gene names: NA

Gene position: 3896282-3895407 (Counterclockwise)

Preceding gene: 54025651

Following gene: 54025649

Centisome position: 64.71

GC content: 74.43

Gene sequence:

>876_bases
ATGGGAGAGGACTGGAGCCGCTGGCTCGACGAGGCGCCCGACCGGGGCGACCCGCCGAGCCGACAAGCGCGTTCGAAGGC
TCCGGTGGTGCGGCTGCGGCGGCGCGGCGGTGACGGCGAGGCCGAGGGGTTCGGGCAGCGGCCGATCCTGGTGGTCGGCG
GCTGCGGCGGTGCGGGCACGACGACGACGGCGCTGGGCATCGCGGGGGAGCTCGGCTCGGCGGGTACCCCGACGGTCGCG
GTCGACGCGACCGCGGCGGGCAGCGATCTGGCGCTGCGGGGCGCCGATGAGCATCTGCACCCGATCAGCCTGCAGTCGTG
GCTGTACGGCCGCGGCGACGACGAACCGGCGCCGCTGAAGGAATGCCTGTCGCGGGCGACCTCCGGCATCGGCCTGCTCT
GGCGCGATGCCGCCCCGCTGCGCCGCCGCGCGACCTACTCCACCGTGGCGCGCGCGGTGGCCGACGCCGGGTACACGGCG
GTCTACGACGGCGGCCACCCGATCGCGAGCAGACAGCTGCGTCCGCTGCTCTACGACGCCGATATCGCGCTGGTGCTTGC
CATTCCGGCCCGCCCCGATGCCGCGAACCGGTTGCGGATGACGCTCGAATGGCTCGACGACGAGTTCGGCGAGGCCGCCG
AGGGGCAGGGTGGCGGCATCGTGGGTGACACCACCCTGGTGATCTCGCACCAGGCGCCCGGCGACGACTCCCGGGTCGCC
GATCATCTGCGCGCGCACCTGTCGGGCTGGGTCCGCGACATCCGTGAGATCCCCTACGATCCGCACCTGGCCCGGGGCGA
GCTGGTCCGCCACGCCGACCTGGCGGCCGAGACGCGCCGGGCGTACGAGCGACTCGTGGCGGGGGTGGCATCATGA

Upstream 100 bases:

>100_bases
CGCGCCCGCCACGTACAACAAGCAGATGGTCACCACCGAGGTGATCGACGGCCGGGTGCTCATCGCGGGCATCGCGGCCG
GATAAGGAGAGCTGAGAGCG

Downstream 100 bases:

>100_bases
CCGCCGCCATGAGACTTCGCCGCAAACTCGATCCGCGACCGGCCGGGGTGGTCGCCCCGCCGGAGTCGCGCCGCGCGCCG
GTGTGGGACCGCCCGGTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MGEDWSRWLDEAPDRGDPPSRQARSKAPVVRLRRRGGDGEAEGFGQRPILVVGGCGGAGTTTTALGIAGELGSAGTPTVA
VDATAAGSDLALRGADEHLHPISLQSWLYGRGDDEPAPLKECLSRATSGIGLLWRDAAPLRRRATYSTVARAVADAGYTA
VYDGGHPIASRQLRPLLYDADIALVLAIPARPDAANRLRMTLEWLDDEFGEAAEGQGGGIVGDTTLVISHQAPGDDSRVA
DHLRAHLSGWVRDIREIPYDPHLARGELVRHADLAAETRRAYERLVAGVAS

Sequences:

>Translated_291_residues
MGEDWSRWLDEAPDRGDPPSRQARSKAPVVRLRRRGGDGEAEGFGQRPILVVGGCGGAGTTTTALGIAGELGSAGTPTVA
VDATAAGSDLALRGADEHLHPISLQSWLYGRGDDEPAPLKECLSRATSGIGLLWRDAAPLRRRATYSTVARAVADAGYTA
VYDGGHPIASRQLRPLLYDADIALVLAIPARPDAANRLRMTLEWLDDEFGEAAEGQGGGIVGDTTLVISHQAPGDDSRVA
DHLRAHLSGWVRDIREIPYDPHLARGELVRHADLAAETRRAYERLVAGVAS
>Mature_290_residues
GEDWSRWLDEAPDRGDPPSRQARSKAPVVRLRRRGGDGEAEGFGQRPILVVGGCGGAGTTTTALGIAGELGSAGTPTVAV
DATAAGSDLALRGADEHLHPISLQSWLYGRGDDEPAPLKECLSRATSGIGLLWRDAAPLRRRATYSTVARAVADAGYTAV
YDGGHPIASRQLRPLLYDADIALVLAIPARPDAANRLRMTLEWLDDEFGEAAEGQGGGIVGDTTLVISHQAPGDDSRVAD
HLRAHLSGWVRDIREIPYDPHLARGELVRHADLAAETRRAYERLVAGVAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30914; Mature: 30783

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEDWSRWLDEAPDRGDPPSRQARSKAPVVRLRRRGGDGEAEGFGQRPILVVGGCGGAGT
CCCHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCC
TTTALGIAGELGSAGTPTVAVDATAAGSDLALRGADEHLHPISLQSWLYGRGDDEPAPLK
HHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCHHHHHCCCCCCCCHHHH
ECLSRATSGIGLLWRDAAPLRRRATYSTVARAVADAGYTAVYDGGHPIASRQLRPLLYDA
HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHCCCCEEECC
DIALVLAIPARPDAANRLRMTLEWLDDEFGEAAEGQGGGIVGDTTLVISHQAPGDDSRVA
CEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCEEEEEEECCCCCHHHHH
DHLRAHLSGWVRDIREIPYDPHLARGELVRHADLAAETRRAYERLVAGVAS
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GEDWSRWLDEAPDRGDPPSRQARSKAPVVRLRRRGGDGEAEGFGQRPILVVGGCGGAGT
CCHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCC
TTTALGIAGELGSAGTPTVAVDATAAGSDLALRGADEHLHPISLQSWLYGRGDDEPAPLK
HHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCHHHHHCCCCCCCCHHHH
ECLSRATSGIGLLWRDAAPLRRRATYSTVARAVADAGYTAVYDGGHPIASRQLRPLLYDA
HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHCCCCEEECC
DIALVLAIPARPDAANRLRMTLEWLDDEFGEAAEGQGGGIVGDTTLVISHQAPGDDSRVA
CEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCEEEEEEECCCCCHHHHH
DHLRAHLSGWVRDIREIPYDPHLARGELVRHADLAAETRRAYERLVAGVAS
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA