Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54025641

Identifier: 54025641

GI number: 54025641

Start: 3887256

End: 3887564

Strand: Reverse

Name: 54025641

Synonym: nfa36710

Alternate gene names: NA

Gene position: 3887564-3887256 (Counterclockwise)

Preceding gene: 54025642

Following gene: 54025640

Centisome position: 64.56

GC content: 68.93

Gene sequence:

>309_bases
ATGATGCCGCATCGTTCGTATCGCAAGGTCTCGCCCGAGGTGCGCAAGGCGGCGGTCGAGCAGGTCGTCGCCCTGACCGG
CACGCTGCGCAGCGAGACCGAGGCCTGCAAGGTGGTGGCCGAGCAGATCGGCGTGCACGCCAACTCGGTGCGCAATTGGG
TGCGTGCCGCCGAGGGACCGAGTCTCGAGCGGATGGACGTCATCGCGTTGCGGCGGAAAGTGGCCCTGCTGCAACAGCAG
CTGGCGGCGGCCGCGGAGATGAACCGCACCCTGGCCGACACCCTCAACGAAGCCCGTCGGCGCACGTGA

Upstream 100 bases:

>100_bases
GAGACCAACCAGCGTTTCAGTGAATTCACCGAATCCACCACGCGCGGTGGCGAGTCCCCGAACGGAAGCGCGGCGTGAGA
TTCGGCGGGAGGAGTGCCGC

Downstream 100 bases:

>100_bases
CCGGAGTCCTCGCGTCGGTGTCCGACGCCTGCCGCCGGAAGTGGTCGCGGTGAGCGCCCGCGGCGTGCTGTGGTTCGCGC
TCGGGACCGTCGTCGGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MMPHRSYRKVSPEVRKAAVEQVVALTGTLRSETEACKVVAEQIGVHANSVRNWVRAAEGPSLERMDVIALRRKVALLQQQ
LAAAAEMNRTLADTLNEARRRT

Sequences:

>Translated_102_residues
MMPHRSYRKVSPEVRKAAVEQVVALTGTLRSETEACKVVAEQIGVHANSVRNWVRAAEGPSLERMDVIALRRKVALLQQQ
LAAAAEMNRTLADTLNEARRRT
>Mature_102_residues
MMPHRSYRKVSPEVRKAAVEQVVALTGTLRSETEACKVVAEQIGVHANSVRNWVRAAEGPSLERMDVIALRRKVALLQQQ
LAAAAEMNRTLADTLNEARRRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11378; Mature: 11378

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPHRSYRKVSPEVRKAAVEQVVALTGTLRSETEACKVVAEQIGVHANSVRNWVRAAEGP
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
SLERMDVIALRRKVALLQQQLAAAAEMNRTLADTLNEARRRT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMPHRSYRKVSPEVRKAAVEQVVALTGTLRSETEACKVVAEQIGVHANSVRNWVRAAEGP
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
SLERMDVIALRRKVALLQQQLAAAAEMNRTLADTLNEARRRT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA