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The map label for this gene is yrrL [H]

Identifier: 54025612

GI number: 54025612

Start: 3852751

End: 3854433

Strand: Reverse

Name: yrrL [H]

Synonym: nfa36420

Alternate gene names: 54025612

Gene position: 3854433-3852751 (Counterclockwise)

Preceding gene: 54025613

Following gene: 54025611

Centisome position: 64.01

GC content: 71.84

Gene sequence:

>1683_bases
ATGACGGACCGGTGGACACGAGCGGAGGAGCGGTACCGGCAACGGGAAGCCGACCGCAGGTACCGGCGTGACGACGCGGC
GTGGGAGCGCAGCGCCCGCTCGGCGCCCGCGCACGACGAGTGGGACGACTACGACGACGACACCGCCGTCATCCCCCGCT
ACACCGACGACGAGCCCGCCTACGACGAGTTCCGTTCGGCCGCAGGCGAATCCGGCGCGGTCGAGCCGGCCTACGCGGAC
TACCCCGAGGACCCGGACCACGAGCAGCCCACCGCCCGGGGGCGCCGGTCCGCCGCGGCCGCCGGCCGGCCGGCCCGCAC
CGAGTCCGCCGCTCGCCCTCGCGGTTCCGGTAAGCCCCGGCCGTCCGGCCGCACAGCAGACGGGGGACGCACCCGGTCGG
CGGCCGGGCGTGCTCGCGCCGAGGGCGCGGCGGGCCGCAGCCGCGGCACGGGCGCGGCGGGCCGTCCGGAGCGATCGGGG
CGCCCGCAGCCGAAGGGGAGGAAAGCCTCGCGCGCGGCCTCCCGCAAGGCCGCCGAGCGGGAACGCCGCAGGCACACCAC
CTGGGTGCTGGCCGCCGTCTTCGTCCTGTTGCTCGGCGGTGCGGGCACCTTCGCGGTGATGAAGCTGACCGACGACTTCG
CCCCCGCCGAGGACTTCGCCGGTCCGCCCGGACCGCTGGTGGTGGTGCGGGTGCATCCCGGCGACACCGCGAGCCAGATC
GCGAAATCCATGTACGACAAGGGCGTGGTGGCCAGCGCCGACGCGTTCTTCGAGGCGGCGGTGCGCAATTCCGGCATGAA
CGCGGTGCAGCCGGGCTACTACCAGATTCCCAGCCGCAGCCCGGCCGCCGATGCGGTCGCCGCGCTGCTCGGCAAGAACT
CCCGCGTCGGCAACCTGGTGATCTCGGAGGGACGTCAACTGCACGACCAGCACGACGTGAACACCGGCGCCCGCAAGGAG
GGCATCTACACCAAGATCGCCGACGCCAGCTGTGTGGGCACCGGCGCCGAACGCAAGTGCGTGACCTACGAGGAACTCGA
CGCCGCGGGGGCCAGTGCCGATCTGGCTGGGCTGGGCGTGCCGTCCTGGGCCGAGGCGGCCGTGCGTGCGGCACCGGACC
GCCGCAGGCAGATCGAGGGCCTGATCGCGGCGGGCACCTGGGACTTCGATCCCAGCGGCAGCCCGCAGCAGATCCTGCGC
GAACTGATCACCGCCAGCGCGGCCGGCTACGAATCCACCGGGCTGTTGCAGTCGGGGGCGAACACCCAGCTGAGCCCATA
CGAGACGTTGATCGCGGCGTCCCTGGTGGAGCGCGAGGCCCTGCCGCAGGACATGCCCAAGGTCGCCCGGGTGATCATCA
ACCGGTTGAAGATCGATCAGCCGTTGCAGTTCGACTCCACGGTGAACTATTCGCTGGACCGCACCGAGGTCGCCACCACC
GACAGCGACCGCGCCACGGTCACCCCCTGGAACACCTACGCGATGGCGGGGCTGCCCGCGAACCCGATCGCGGCGCCGTC
GCTGAACGCCTTGCGCGCGGTCGAGAATCCCGAACCGGGCAACTGGCTGTACTTCGTCACGATCGACCAGAAGGGCACGA
CCCTGTTCACCGAGAGCTACGCCGAGCACCTGCGCAATATCGACAAGGCGATGGAAAGCGGGATCCTCGACAGTGGGCGC
TGA

Upstream 100 bases:

>100_bases
CGGCGGCCGTATCGATCCTGCAGGGATGGTTGGACGAACGGAGTGCGGTGATGAGGTCGGTCGGGGAAGCGGAGTCGGCG
ACGTCGTCCGGAGATGATGC

Downstream 100 bases:

>100_bases
CGCGACGACTCCCCGGCGGGCGGCGGTGCTCGGCAAGCCCATCGGGCATTCCCGCTCACCGCAGCTGCACCTGGCCGCCT
ACCGCGCGCTGGGCCTGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 559

Protein sequence:

>560_residues
MTDRWTRAEERYRQREADRRYRRDDAAWERSARSAPAHDEWDDYDDDTAVIPRYTDDEPAYDEFRSAAGESGAVEPAYAD
YPEDPDHEQPTARGRRSAAAAGRPARTESAARPRGSGKPRPSGRTADGGRTRSAAGRARAEGAAGRSRGTGAAGRPERSG
RPQPKGRKASRAASRKAAERERRRHTTWVLAAVFVLLLGGAGTFAVMKLTDDFAPAEDFAGPPGPLVVVRVHPGDTASQI
AKSMYDKGVVASADAFFEAAVRNSGMNAVQPGYYQIPSRSPAADAVAALLGKNSRVGNLVISEGRQLHDQHDVNTGARKE
GIYTKIADASCVGTGAERKCVTYEELDAAGASADLAGLGVPSWAEAAVRAAPDRRRQIEGLIAAGTWDFDPSGSPQQILR
ELITASAAGYESTGLLQSGANTQLSPYETLIAASLVEREALPQDMPKVARVIINRLKIDQPLQFDSTVNYSLDRTEVATT
DSDRATVTPWNTYAMAGLPANPIAAPSLNALRAVENPEPGNWLYFVTIDQKGTTLFTESYAEHLRNIDKAMESGILDSGR

Sequences:

>Translated_560_residues
MTDRWTRAEERYRQREADRRYRRDDAAWERSARSAPAHDEWDDYDDDTAVIPRYTDDEPAYDEFRSAAGESGAVEPAYAD
YPEDPDHEQPTARGRRSAAAAGRPARTESAARPRGSGKPRPSGRTADGGRTRSAAGRARAEGAAGRSRGTGAAGRPERSG
RPQPKGRKASRAASRKAAERERRRHTTWVLAAVFVLLLGGAGTFAVMKLTDDFAPAEDFAGPPGPLVVVRVHPGDTASQI
AKSMYDKGVVASADAFFEAAVRNSGMNAVQPGYYQIPSRSPAADAVAALLGKNSRVGNLVISEGRQLHDQHDVNTGARKE
GIYTKIADASCVGTGAERKCVTYEELDAAGASADLAGLGVPSWAEAAVRAAPDRRRQIEGLIAAGTWDFDPSGSPQQILR
ELITASAAGYESTGLLQSGANTQLSPYETLIAASLVEREALPQDMPKVARVIINRLKIDQPLQFDSTVNYSLDRTEVATT
DSDRATVTPWNTYAMAGLPANPIAAPSLNALRAVENPEPGNWLYFVTIDQKGTTLFTESYAEHLRNIDKAMESGILDSGR
>Mature_559_residues
TDRWTRAEERYRQREADRRYRRDDAAWERSARSAPAHDEWDDYDDDTAVIPRYTDDEPAYDEFRSAAGESGAVEPAYADY
PEDPDHEQPTARGRRSAAAAGRPARTESAARPRGSGKPRPSGRTADGGRTRSAAGRARAEGAAGRSRGTGAAGRPERSGR
PQPKGRKASRAASRKAAERERRRHTTWVLAAVFVLLLGGAGTFAVMKLTDDFAPAEDFAGPPGPLVVVRVHPGDTASQIA
KSMYDKGVVASADAFFEAAVRNSGMNAVQPGYYQIPSRSPAADAVAALLGKNSRVGNLVISEGRQLHDQHDVNTGARKEG
IYTKIADASCVGTGAERKCVTYEELDAAGASADLAGLGVPSWAEAAVRAAPDRRRQIEGLIAAGTWDFDPSGSPQQILRE
LITASAAGYESTGLLQSGANTQLSPYETLIAASLVEREALPQDMPKVARVIINRLKIDQPLQFDSTVNYSLDRTEVATTD
SDRATVTPWNTYAMAGLPANPIAAPSLNALRAVENPEPGNWLYFVTIDQKGTTLFTESYAEHLRNIDKAMESGILDSGR

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=183, Percent_Identity=31.1475409836066, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 60297; Mature: 60166

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRWTRAEERYRQREADRRYRRDDAAWERSARSAPAHDEWDDYDDDTAVIPRYTDDEPA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCH
YDEFRSAAGESGAVEPAYADYPEDPDHEQPTARGRRSAAAAGRPARTESAARPRGSGKPR
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCC
PSGRTADGGRTRSAAGRARAEGAAGRSRGTGAAGRPERSGRPQPKGRKASRAASRKAAER
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ERRRHTTWVLAAVFVLLLGGAGTFAVMKLTDDFAPAEDFAGPPGPLVVVRVHPGDTASQI
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCCCCCCEEEEEECCCCHHHHH
AKSMYDKGVVASADAFFEAAVRNSGMNAVQPGYYQIPSRSPAADAVAALLGKNSRVGNLV
HHHHHHCCCEECHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCE
ISEGRQLHDQHDVNTGARKEGIYTKIADASCVGTGAERKCVTYEELDAAGASADLAGLGV
ECCCHHHHHHHCCCCCCHHCCCEEEECCCHHCCCCCCCCCCCHHHHHCCCCCCCHHCCCC
PSWAEAAVRAAPDRRRQIEGLIAAGTWDFDPSGSPQQILRELITASAAGYESTGLLQSGA
CHHHHHHHHCCCHHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCC
NTQLSPYETLIAASLVEREALPQDMPKVARVIINRLKIDQPLQFDSTVNYSLDRTEVATT
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECC
DSDRATVTPWNTYAMAGLPANPIAAPSLNALRAVENPEPGNWLYFVTIDQKGTTLFTESY
CCCCEEECCCCCEEECCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCEEHHHHH
AEHLRNIDKAMESGILDSGR
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TDRWTRAEERYRQREADRRYRRDDAAWERSARSAPAHDEWDDYDDDTAVIPRYTDDEPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCH
YDEFRSAAGESGAVEPAYADYPEDPDHEQPTARGRRSAAAAGRPARTESAARPRGSGKPR
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCCCC
PSGRTADGGRTRSAAGRARAEGAAGRSRGTGAAGRPERSGRPQPKGRKASRAASRKAAER
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ERRRHTTWVLAAVFVLLLGGAGTFAVMKLTDDFAPAEDFAGPPGPLVVVRVHPGDTASQI
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCCCCCCEEEEEECCCCHHHHH
AKSMYDKGVVASADAFFEAAVRNSGMNAVQPGYYQIPSRSPAADAVAALLGKNSRVGNLV
HHHHHHCCCEECHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCE
ISEGRQLHDQHDVNTGARKEGIYTKIADASCVGTGAERKCVTYEELDAAGASADLAGLGV
ECCCHHHHHHHCCCCCCHHCCCEEEECCCHHCCCCCCCCCCCHHHHHCCCCCCCHHCCCC
PSWAEAAVRAAPDRRRQIEGLIAAGTWDFDPSGSPQQILRELITASAAGYESTGLLQSGA
CHHHHHHHHCCCHHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHCCC
NTQLSPYETLIAASLVEREALPQDMPKVARVIINRLKIDQPLQFDSTVNYSLDRTEVATT
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECC
DSDRATVTPWNTYAMAGLPANPIAAPSLNALRAVENPEPGNWLYFVTIDQKGTTLFTESY
CCCCEEECCCCCEEECCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCEEHHHHH
AEHLRNIDKAMESGILDSGR
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]