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The map label for this gene is 54025598

Identifier: 54025598

GI number: 54025598

Start: 3840335

End: 3840910

Strand: Reverse

Name: 54025598

Synonym: nfa36280

Alternate gene names: NA

Gene position: 3840910-3840335 (Counterclockwise)

Preceding gene: 54025600

Following gene: 54025595

Centisome position: 63.79

GC content: 75.0

Gene sequence:

>576_bases
ATGGCGGAGGGCCGCGCGCGCGAACGCGCCGACGCCGCGCGCAACCGGCGGGCGATCCTGGCCGCCACCAGGGCACTGCT
CGCCGAACACGGCGCCGAGGGCGTCACGATGGAACGGGTGGCCGCGGTCGCGGGGGTGGGCAAGGGCACGATCTTCCACC
GGTTCGGCAGCCGGGCGGGCCTGCTCCAGGAGTTGATGGCCGAACCCGCGCTGGCGCTGCGGGAAGCGGTCGCCTCCGGA
CCTCCGCCGCTGGGGCCGGGCGCTCCGCCCGCGGACCGGTTGGTGGCATTCTTCGCCGCCATGACCGAGCTGGTGACCGA
CAACGTCGAACTGGTCGCCGCCTACAACGCGGTCCCGCCGCATCCGCGACGCGACGAATTCCACGCGTTCTGGGCCGAGC
ACGTCACCGACCTGCTGCGCCAAGCGCGCCCGGACGTCGACGCCGAGGCGGTCGGCACCCTGCTGTTCGCGGCGCTCGGC
GCCGAGCCGGTGGCGGTGATGGTGCGGGCCGGGCAGGCCGAGCGGGTGTCTGCCGCGATGCGCGAGGTGGTGCTGTCGCT
GGTCCGCGGCACCTGA

Upstream 100 bases:

>100_bases
CGATTGCCCGCATCGAGAACTCCATAAGTTGACTGTTGGTCCAGTTGATTGCCGAACATATGGACCTGCGGTCAACTTGT
CAACGGCCGAGGAGGATGTC

Downstream 100 bases:

>100_bases
CCCGGCGGGCCCCGCGCCGCCGCCGGATCGGGCCGCGGAACCCGCGACGCCCGATCGTCCCCGGCCGGGCGCCGCGACCG
TGCCGCCCGGACGCTCAATC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: TetR-Family Transcriptional Regulator; Transcriptional Regulator

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MAEGRARERADAARNRRAILAATRALLAEHGAEGVTMERVAAVAGVGKGTIFHRFGSRAGLLQELMAEPALALREAVASG
PPPLGPGAPPADRLVAFFAAMTELVTDNVELVAAYNAVPPHPRRDEFHAFWAEHVTDLLRQARPDVDAEAVGTLLFAALG
AEPVAVMVRAGQAERVSAAMREVVLSLVRGT

Sequences:

>Translated_191_residues
MAEGRARERADAARNRRAILAATRALLAEHGAEGVTMERVAAVAGVGKGTIFHRFGSRAGLLQELMAEPALALREAVASG
PPPLGPGAPPADRLVAFFAAMTELVTDNVELVAAYNAVPPHPRRDEFHAFWAEHVTDLLRQARPDVDAEAVGTLLFAALG
AEPVAVMVRAGQAERVSAAMREVVLSLVRGT
>Mature_190_residues
AEGRARERADAARNRRAILAATRALLAEHGAEGVTMERVAAVAGVGKGTIFHRFGSRAGLLQELMAEPALALREAVASGP
PPLGPGAPPADRLVAFFAAMTELVTDNVELVAAYNAVPPHPRRDEFHAFWAEHVTDLLRQARPDVDAEAVGTLLFAALGA
EPVAVMVRAGQAERVSAAMREVVLSLVRGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20172; Mature: 20041

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEGRARERADAARNRRAILAATRALLAEHGAEGVTMERVAAVAGVGKGTIFHRFGSRAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCHHH
LLQELMAEPALALREAVASGPPPLGPGAPPADRLVAFFAAMTELVTDNVELVAAYNAVPP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHEEEECCCCC
HPRRDEFHAFWAEHVTDLLRQARPDVDAEAVGTLLFAALGAEPVAVMVRAGQAERVSAAM
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHH
REVVLSLVRGT
HHHHHHHHHCC
>Mature Secondary Structure 
AEGRARERADAARNRRAILAATRALLAEHGAEGVTMERVAAVAGVGKGTIFHRFGSRAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCHHH
LLQELMAEPALALREAVASGPPPLGPGAPPADRLVAFFAAMTELVTDNVELVAAYNAVPP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHEEEECCCCC
HPRRDEFHAFWAEHVTDLLRQARPDVDAEAVGTLLFAALGAEPVAVMVRAGQAERVSAAM
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHH
REVVLSLVRGT
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA