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The map label for this gene is 54025587

Identifier: 54025587

GI number: 54025587

Start: 3828368

End: 3828688

Strand: Reverse

Name: 54025587

Synonym: nfa36170

Alternate gene names: NA

Gene position: 3828688-3828368 (Counterclockwise)

Preceding gene: 54025588

Following gene: 54025586

Centisome position: 63.59

GC content: 69.47

Gene sequence:

>321_bases
GTGGCCCTTCCCCAGCTGACTGACGAGCAGCGCGCCGCTGCTCTGGAGAAGGCGGCTGCCGCTCGCCGCGCTCGGGCGGA
GCTCAAGGAGCGCTTGAAGCGTGGCGGCACCGACCTGAAGAGCGTCCTCGCCGATGCCGAGACCGACGAGATCCTCGGCA
AGATGAAGGTGTCGGCGCTGCTGGAGGCACTGCCCAAGGTCGGCAAGGTCAAGGCGGCCGAGATCATGAGCGAGCTGGAG
ATCGCCCCCACCCGCCGGCTGCGCGGACTCGGTGATCGGCAGCGCAAGGCGCTGCTGGCCCGGTTCGACTTCGACGCCTG
A

Upstream 100 bases:

>100_bases
GGGGGTGGGTTCGCAATCGGCGGACGTCGTGGGTACGGTCGCTGAGACCGTCGGCTCACCGGCGGTCAGTTGAAGCAATG
AACGATGAGACGGAGGAACC

Downstream 100 bases:

>100_bases
TTCCGAGGGTGGTCGAACACACGCGGAAGGGTCGGCTGGTCGTGCTGGTCGGCCCCTCGGCCGTGGGGAAATCGACGGTC
GTGCGGTGCGTGCGGGAACG

Product: putative integration host factor

Products: NA

Alternate protein names: IHF Family Transcriptional Regulator; Integration Host Factor-Like Protein; Integration Host Factor MihF; MihF Protein

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MALPQLTDEQRAAALEKAAAARRARAELKERLKRGGTDLKSVLADAETDEILGKMKVSALLEALPKVGKVKAAEIMSELE
IAPTRRLRGLGDRQRKALLARFDFDA

Sequences:

>Translated_106_residues
MALPQLTDEQRAAALEKAAAARRARAELKERLKRGGTDLKSVLADAETDEILGKMKVSALLEALPKVGKVKAAEIMSELE
IAPTRRLRGLGDRQRKALLARFDFDA
>Mature_105_residues
ALPQLTDEQRAAALEKAAAARRARAELKERLKRGGTDLKSVLADAETDEILGKMKVSALLEALPKVGKVKAAEIMSELEI
APTRRLRGLGDRQRKALLARFDFDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11611; Mature: 11480

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPQLTDEQRAAALEKAAAARRARAELKERLKRGGTDLKSVLADAETDEILGKMKVSAL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH
LEALPKVGKVKAAEIMSELEIAPTRRLRGLGDRQRKALLARFDFDA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALPQLTDEQRAAALEKAAAARRARAELKERLKRGGTDLKSVLADAETDEILGKMKVSAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH
LEALPKVGKVKAAEIMSELEIAPTRRLRGLGDRQRKALLARFDFDA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA