Click here to switch to the map view.

The map label for this gene is ybhK [C]

Identifier: 54025562

GI number: 54025562

Start: 3802111

End: 3803157

Strand: Reverse

Name: ybhK [C]

Synonym: nfa35920

Alternate gene names: 54025562

Gene position: 3803157-3802111 (Counterclockwise)

Preceding gene: 54025563

Following gene: 54025561

Centisome position: 63.16

GC content: 73.35

Gene sequence:

>1047_bases
ATGACGGAGTGGGAATCCGGCCCCGCGGTCGTCGCCCTCGGTGGCGGACACGGCCTCTACGCGACACTCAGCGCGGTGCG
GCGGCTGACCCGGCGCATCAGCGCGGTGGTGACGGTCGCCGACGACGGCGGCTCCTCCGGCAGGCTGCGCGCGGAACTGG
GGGTGCTGCCGCCCGGTGACCTGCGGATGGCGCTGGCGGCGCTGGCCGCCGACCCGGACGGCGTGTGGGCGCGCACCCTC
CAGCACCGGTTCGGCGGCAGCGGTGCGCTGGCCGGGCACTCGGTGGGGAACCTGATCCTGGCCGGGCTCACCGAGGTGCT
CGGCGACCCGGTCGCGGCGCTGGACGAGGTGGCCGGGCTGCTGCAGTCGACCGGGCGGGTGCTGCCCATGTCACCGATCG
CGCTCGACATCGAGGCCGACGTCTCCGGCCTGGAGGCCGACCCGCGGGTCAGCCGCTGCATCCGCGGCCAGGTCGCGGTG
GCCACCACGCCGGGCAAGGTGCGGCGGGTGCGGCTGATCCCTTCCGACCCGCCCGCCAGCCCCGAGGCGACCTCGGCGAT
CGAGCACGCCGACGTGGTGGTGCTCGGGCCGGGCTCGTGGTTCACCAGCGTCATCCCGCATGTGCTGGTCCCCGAGCTGC
GCGAGGCGCTGGTCTACACCCGCGCGCGCAAGATCCTGGTGTTGAATCTGGCCGCCCAGCCCGGCGAGACCGCGGGCTTC
TCCGCGGAGCGGCACCTGCACGTATTGTCGCAGCACGCACCGGAATTCACCGTCGACGAGGTGCTGGTGGACGCCGGGTC
GGTACCACCGGGGCGGGAACGCGAACATGTGGCAAGGGCTGCCGAACAGTTGCGGGCGCGAGTAACCTTCTCCGAGGTCG
CCGAAGCGGGCACAGATCGGCATCATCCCGGAAAGCTGGCCGCCGCCCTGGATCAGCTGATCCGGCAGCCCCGGCCGCAG
CTGGCGGGGCTTCGGGTGGAGGGACGGCACATGGGCGCGGATGTGCGGTCCGGGTCGGGTGGAAAGGAGCGCGTCTCGTG
GCGATGA

Upstream 100 bases:

>100_bases
GCGTGGCGATCGCCGAGGCGCTGGGGGAGCTGATCGGCGCCGACACCTCGGCGGAGTCGGCGGACGTGGTGCGGGTCGTG
CACCGGGATCTGGGGCGCGA

Downstream 100 bases:

>100_bases
CAGCCGAGGTGAAGGACGAGCTGAGCAGGCTCACGGTGTCGCAGGTCAGCTCGCGCAAGGCGGAGTTGTCCGCCCTGCTC
CGGTTCGCGGGCGGCCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MTEWESGPAVVALGGGHGLYATLSAVRRLTRRISAVVTVADDGGSSGRLRAELGVLPPGDLRMALAALAADPDGVWARTL
QHRFGGSGALAGHSVGNLILAGLTEVLGDPVAALDEVAGLLQSTGRVLPMSPIALDIEADVSGLEADPRVSRCIRGQVAV
ATTPGKVRRVRLIPSDPPASPEATSAIEHADVVVLGPGSWFTSVIPHVLVPELREALVYTRARKILVLNLAAQPGETAGF
SAERHLHVLSQHAPEFTVDEVLVDAGSVPPGREREHVARAAEQLRARVTFSEVAEAGTDRHHPGKLAAALDQLIRQPRPQ
LAGLRVEGRHMGADVRSGSGGKERVSWR

Sequences:

>Translated_348_residues
MTEWESGPAVVALGGGHGLYATLSAVRRLTRRISAVVTVADDGGSSGRLRAELGVLPPGDLRMALAALAADPDGVWARTL
QHRFGGSGALAGHSVGNLILAGLTEVLGDPVAALDEVAGLLQSTGRVLPMSPIALDIEADVSGLEADPRVSRCIRGQVAV
ATTPGKVRRVRLIPSDPPASPEATSAIEHADVVVLGPGSWFTSVIPHVLVPELREALVYTRARKILVLNLAAQPGETAGF
SAERHLHVLSQHAPEFTVDEVLVDAGSVPPGREREHVARAAEQLRARVTFSEVAEAGTDRHHPGKLAAALDQLIRQPRPQ
LAGLRVEGRHMGADVRSGSGGKERVSWR
>Mature_347_residues
TEWESGPAVVALGGGHGLYATLSAVRRLTRRISAVVTVADDGGSSGRLRAELGVLPPGDLRMALAALAADPDGVWARTLQ
HRFGGSGALAGHSVGNLILAGLTEVLGDPVAALDEVAGLLQSTGRVLPMSPIALDIEADVSGLEADPRVSRCIRGQVAVA
TTPGKVRRVRLIPSDPPASPEATSAIEHADVVVLGPGSWFTSVIPHVLVPELREALVYTRARKILVLNLAAQPGETAGFS
AERHLHVLSQHAPEFTVDEVLVDAGSVPPGREREHVARAAEQLRARVTFSEVAEAGTDRHHPGKLAAALDQLIRQPRPQL
AGLRVEGRHMGADVRSGSGGKERVSWR

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=256, Percent_Identity=35.15625, Blast_Score=132, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 36562; Mature: 36431

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEWESGPAVVALGGGHGLYATLSAVRRLTRRISAVVTVADDGGSSGRLRAELGVLPPGD
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCH
LRMALAALAADPDGVWARTLQHRFGGSGALAGHSVGNLILAGLTEVLGDPVAALDEVAGL
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
LQSTGRVLPMSPIALDIEADVSGLEADPRVSRCIRGQVAVATTPGKVRRVRLIPSDPPAS
HHHCCCEEECCCEEEEEECCCCCCCCCHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCC
PEATSAIEHADVVVLGPGSWFTSVIPHVLVPELREALVYTRARKILVLNLAAQPGETAGF
CCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCC
SAERHLHVLSQHAPEFTVDEVLVDAGSVPPGREREHVARAAEQLRARVTFSEVAEAGTDR
CHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCC
HHPGKLAAALDQLIRQPRPQLAGLRVEGRHMGADVRSGSGGKERVSWR
CCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEWESGPAVVALGGGHGLYATLSAVRRLTRRISAVVTVADDGGSSGRLRAELGVLPPGD
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCCH
LRMALAALAADPDGVWARTLQHRFGGSGALAGHSVGNLILAGLTEVLGDPVAALDEVAGL
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
LQSTGRVLPMSPIALDIEADVSGLEADPRVSRCIRGQVAVATTPGKVRRVRLIPSDPPAS
HHHCCCEEECCCEEEEEECCCCCCCCCHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCC
PEATSAIEHADVVVLGPGSWFTSVIPHVLVPELREALVYTRARKILVLNLAAQPGETAGF
CCHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCC
SAERHLHVLSQHAPEFTVDEVLVDAGSVPPGREREHVARAAEQLRARVTFSEVAEAGTDR
CHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCC
HHPGKLAAALDQLIRQPRPQLAGLRVEGRHMGADVRSGSGGKERVSWR
CCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]