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The map label for this gene is yurY [H]

Identifier: 54025528

GI number: 54025528

Start: 3766060

End: 3766836

Strand: Reverse

Name: yurY [H]

Synonym: nfa35580

Alternate gene names: 54025528

Gene position: 3766836-3766060 (Counterclockwise)

Preceding gene: 54025529

Following gene: 54025527

Centisome position: 62.56

GC content: 68.08

Gene sequence:

>777_bases
ATGACCACCCTGGAAATCAAGGACCTGCACGTCGAGGTCGCCAACCCCGACGAGACGGGCGAGCCGATCAAGATCCTCAA
GGGCGTGAACCTGACCGTGCGCTCGGGCGAGACGCACGCCATCATGGGCCCCAACGGTTCCGGCAAGTCCACCCTCTCCT
ACGCCATCGCCGGCCATCCCAAGTACACCGTGACCTCGGGGTCGATCACCCTCGACGGCGAGGACGTGCTGGAGATGTCG
GTCGACGAGCGCGCGCGTGCGGGCCTGTTCCTGGCCATGCAGTACCCGGTCGAGGTGCCCGGCGTCTCGATGTCGAACTT
CCTGCGCACCGCCGCCACCGCCGTGCGCGGCGAGGCCCCGAAGCTGCGGCACTGGGTCAAGGAGGTGAAGGAGTCGATGA
GCGAGCTCGAGATCGACCCCGCCTTCGCCGAGCGCAGCGTGAACGAGGGCTTCTCCGGCGGTGAGAAGAAGCGCCACGAG
ATCCTGCAGCTGGGCCTGCTCAAGCCGAAGATCGCCATCCTCGACGAGACCGACTCCGGCCTGGACGTCGACGCGCTGCG
CATCGTCTCCGAGGGCGTCAACCGCTACCGCGAGCGCGAGAACGGCGGCGTGCTGCTGATCACGCACTACACCCGCATCC
TGCGCTACATCCAGCCGCAGTTCGTGCACGTCTTCGTCGGCGGCCGCATCGTCGCCGAGGGCGGCCCCGAGCTCGCCGAG
GAACTCGACGCCAACGGCTACGTCCGCTTCACCCAGACCGCGACCGCGGGAGCCTGA

Upstream 100 bases:

>100_bases
GTGCCCCAGGTCCGGGAGCGGCTGGAGGCGGCCATCGAGGCCGAGCTCGCCGCCGTCGGCGTCTGACACATCGAAACTTC
CCTCCCCGCAAAGGAACTCC

Downstream 100 bases:

>100_bases
CATGACCGCTGCGCCTGTCACGGGCCGGACACTCGACGTCGCCCGGATCCGGGCCGACTTCCCGATCCTGAGCCGCACGG
TCCGGGACGGTAAGCCGTTG

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTTLEIKDLHVEVANPDETGEPIKILKGVNLTVRSGETHAIMGPNGSGKSTLSYAIAGHPKYTVTSGSITLDGEDVLEMS
VDERARAGLFLAMQYPVEVPGVSMSNFLRTAATAVRGEAPKLRHWVKEVKESMSELEIDPAFAERSVNEGFSGGEKKRHE
ILQLGLLKPKIAILDETDSGLDVDALRIVSEGVNRYRERENGGVLLITHYTRILRYIQPQFVHVFVGGRIVAEGGPELAE
ELDANGYVRFTQTATAGA

Sequences:

>Translated_258_residues
MTTLEIKDLHVEVANPDETGEPIKILKGVNLTVRSGETHAIMGPNGSGKSTLSYAIAGHPKYTVTSGSITLDGEDVLEMS
VDERARAGLFLAMQYPVEVPGVSMSNFLRTAATAVRGEAPKLRHWVKEVKESMSELEIDPAFAERSVNEGFSGGEKKRHE
ILQLGLLKPKIAILDETDSGLDVDALRIVSEGVNRYRERENGGVLLITHYTRILRYIQPQFVHVFVGGRIVAEGGPELAE
ELDANGYVRFTQTATAGA
>Mature_257_residues
TTLEIKDLHVEVANPDETGEPIKILKGVNLTVRSGETHAIMGPNGSGKSTLSYAIAGHPKYTVTSGSITLDGEDVLEMSV
DERARAGLFLAMQYPVEVPGVSMSNFLRTAATAVRGEAPKLRHWVKEVKESMSELEIDPAFAERSVNEGFSGGEKKRHEI
LQLGLLKPKIAILDETDSGLDVDALRIVSEGVNRYRERENGGVLLITHYTRILRYIQPQFVHVFVGGRIVAEGGPELAEE
LDANGYVRFTQTATAGA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI9961252, Length=261, Percent_Identity=29.5019157088123, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI4505771, Length=261, Percent_Identity=29.5019157088123, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI9961250, Length=261, Percent_Identity=29.5019157088123, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI42741659, Length=264, Percent_Identity=29.5454545454545, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI255708477, Length=175, Percent_Identity=32.5714285714286, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI1787972, Length=253, Percent_Identity=48.6166007905138, Blast_Score=230, Evalue=9e-62,
Organism=Escherichia coli, GI1787500, Length=239, Percent_Identity=33.0543933054393, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1786698, Length=186, Percent_Identity=29.5698924731183, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788506, Length=215, Percent_Identity=27.906976744186, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI87081709, Length=185, Percent_Identity=28.1081081081081, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787029, Length=234, Percent_Identity=28.6324786324786, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787370, Length=220, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788225, Length=232, Percent_Identity=28.0172413793103, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193209708, Length=251, Percent_Identity=31.4741035856574, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17543740, Length=241, Percent_Identity=30.2904564315353, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17565938, Length=209, Percent_Identity=32.0574162679426, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17541710, Length=254, Percent_Identity=27.9527559055118, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI71996809, Length=221, Percent_Identity=27.6018099547511, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI212646699, Length=238, Percent_Identity=27.7310924369748, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17567269, Length=192, Percent_Identity=30.7291666666667, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17567265, Length=229, Percent_Identity=29.2576419213974, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17533971, Length=244, Percent_Identity=28.6885245901639, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=221, Percent_Identity=27.1493212669683, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=221, Percent_Identity=27.1493212669683, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115533592, Length=227, Percent_Identity=28.6343612334802, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=241, Percent_Identity=27.8008298755187, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI115535101, Length=194, Percent_Identity=30.4123711340206, Blast_Score=64, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI71983523, Length=230, Percent_Identity=27.8260869565217, Blast_Score=64, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=230, Percent_Identity=27.8260869565217, Blast_Score=64, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=230, Percent_Identity=27.8260869565217, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=199, Percent_Identity=27.1356783919598, Blast_Score=68, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6319856, Length=255, Percent_Identity=26.2745098039216, Blast_Score=64, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6324985, Length=222, Percent_Identity=26.5765765765766, Blast_Score=62, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28100; Mature: 27969

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLEIKDLHVEVANPDETGEPIKILKGVNLTVRSGETHAIMGPNGSGKSTLSYAIAGHP
CCEEEEEEEEEEECCCCCCCCCEEEEECCEEEEECCCEEEEECCCCCCCCEEEEEEECCC
KYTVTSGSITLDGEDVLEMSVDERARAGLFLAMQYPVEVPGVSMSNFLRTAATAVRGEAP
CEEEECCEEEECCHHHHHHCHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCH
KLRHWVKEVKESMSELEIDPAFAERSVNEGFSGGEKKRHEILQLGLLKPKIAILDETDSG
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC
LDVDALRIVSEGVNRYRERENGGVLLITHYTRILRYIQPQFVHVFVGGRIVAEGGPELAE
CCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCEEEEEEECCEEEECCCHHHHH
ELDANGYVRFTQTATAGA
HCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
TTLEIKDLHVEVANPDETGEPIKILKGVNLTVRSGETHAIMGPNGSGKSTLSYAIAGHP
CEEEEEEEEEEECCCCCCCCCEEEEECCEEEEECCCEEEEECCCCCCCCEEEEEEECCC
KYTVTSGSITLDGEDVLEMSVDERARAGLFLAMQYPVEVPGVSMSNFLRTAATAVRGEAP
CEEEECCEEEECCHHHHHHCHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCH
KLRHWVKEVKESMSELEIDPAFAERSVNEGFSGGEKKRHEILQLGLLKPKIAILDETDSG
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCC
LDVDALRIVSEGVNRYRERENGGVLLITHYTRILRYIQPQFVHVFVGGRIVAEGGPELAE
CCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCEEEEEEECCEEEECCCHHHHH
ELDANGYVRFTQTATAGA
HCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]