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The map label for this gene is nifU [H]

Identifier: 54025526

GI number: 54025526

Start: 3764310

End: 3764792

Strand: Reverse

Name: nifU [H]

Synonym: nfa35560

Alternate gene names: 54025526

Gene position: 3764792-3764310 (Counterclockwise)

Preceding gene: 54025527

Following gene: 54025525

Centisome position: 62.53

GC content: 66.05

Gene sequence:

>483_bases
ATGCGCATGGAGCAGATGTACCAGGAAGTGATCCTGGACCACTACAAGCACCCGCATCACCGCGGTCTGCGTGAGCCCTT
CGGCGCCGAGGTGCATCACGTCAACCCGACCTGCGGTGACGAGGTGACCCTGCGCGTGCAGCTGGCCGAGAACGGCGACG
TCGCCGACGTTTCCTACGACGGCCAGGGCTGTTCGATCAGCCAGGCCGCCACCTCGATTCTCACCGATCAGGTGATCGGC
CTGCCGGTGCAGCAGGCGCTGAAGGTCGTCGACGCCTACAACGAGATGATCTCCAGCCGCGGCACCGTGGCGGGCGACGA
GGACCTGCTCGGCGACGGCATCGCCCTCGCCGGTGTGTCCAAATACCCGGCCCGGGTCAAGTGCGCGTTGCTGGGCTGGC
TCGCGTTCAAGGACGCGGTGATCCGGATATCCTCCGACCGAGAGACCGACCTTGCCAGCGGAAGCGGGGAACGCCATGAG
TGA

Upstream 100 bases:

>100_bases
CGCCCGTGCCTCCTTCGCGGTCTACAACACCCTCGACGAGGTCGAGCAGTTGGTGGCCGCGGTGCGGAAGGCTCAGCGCT
TCTTCGGGGTTGCATAGACC

Downstream 100 bases:

>100_bases
GACACCGACCGATGTGACCGAGCCTGCCCAGCAGGCCGAACCCTCGGCCGAGGACGCCAAGCTCCTCGAGGACATCGAGG
AGGCGATGCGCGACGTCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MRMEQMYQEVILDHYKHPHHRGLREPFGAEVHHVNPTCGDEVTLRVQLAENGDVADVSYDGQGCSISQAATSILTDQVIG
LPVQQALKVVDAYNEMISSRGTVAGDEDLLGDGIALAGVSKYPARVKCALLGWLAFKDAVIRISSDRETDLASGSGERHE

Sequences:

>Translated_160_residues
MRMEQMYQEVILDHYKHPHHRGLREPFGAEVHHVNPTCGDEVTLRVQLAENGDVADVSYDGQGCSISQAATSILTDQVIG
LPVQQALKVVDAYNEMISSRGTVAGDEDLLGDGIALAGVSKYPARVKCALLGWLAFKDAVIRISSDRETDLASGSGERHE
>Mature_160_residues
MRMEQMYQEVILDHYKHPHHRGLREPFGAEVHHVNPTCGDEVTLRVQLAENGDVADVSYDGQGCSISQAATSILTDQVIG
LPVQQALKVVDAYNEMISSRGTVAGDEDLLGDGIALAGVSKYPARVKCALLGWLAFKDAVIRISSDRETDLASGSGERHE

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 17388; Mature: 17388

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMEQMYQEVILDHYKHPHHRGLREPFGAEVHHVNPTCGDEVTLRVQLAENGDVADVSYD
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCEEEEEEC
GQGCSISQAATSILTDQVIGLPVQQALKVVDAYNEMISSRGTVAGDEDLLGDGIALAGVS
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEECCCC
KYPARVKCALLGWLAFKDAVIRISSDRETDLASGSGERHE
CCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRMEQMYQEVILDHYKHPHHRGLREPFGAEVHHVNPTCGDEVTLRVQLAENGDVADVSYD
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCEEEEEEC
GQGCSISQAATSILTDQVIGLPVQQALKVVDAYNEMISSRGTVAGDEDLLGDGIALAGVS
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEECCCC
KYPARVKCALLGWLAFKDAVIRISSDRETDLASGSGERHE
CCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]