Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54025523

Identifier: 54025523

GI number: 54025523

Start: 3762903

End: 3763370

Strand: Reverse

Name: 54025523

Synonym: nfa35530

Alternate gene names: NA

Gene position: 3763370-3762903 (Counterclockwise)

Preceding gene: 54025524

Following gene: 54025517

Centisome position: 62.5

GC content: 74.36

Gene sequence:

>468_bases
GTGCAGTTATCCGACGGCGTCATCAGTTTACGGCCGGCCACCGGGGCCGAGCGGTCTCCGATCGGCATCTCGCCGCCCGC
GGCCGAGGCCGCCGAGGCCACCGGCGTCACCCCCGATCGGATCGCCGCGGAGGCGCCGATCGAGACCTTCGCGATCGTGC
GGTCGGCCGACGAGGAGGTCGTCGGCACGCTCGGCGTCCGCGCCGAGGCGCCCTATCTGCACCGGGATCAGGCCGAATTG
ACCTACGCGGTGGACCCGCAGTGGCGCGGGCGCGGGCTGGCCACGCGCGCGGTGGTGCTCGGCTGCCGGTATGTGGCCGC
GGCGGGACTGGCCGAGGAGGTGGTCCTGCGGATCGACCCGGCGAACGCCGCCTCGGTGGCGGTCGCCCGCCGGGCCCGCT
TCAAGTATCTGCGCAGCACCGACGTCGAGGGCGAGGGCCCGCTGGACTGGTACGCGCAGGCGGTGTGA

Upstream 100 bases:

>100_bases
TGCGGCGCAGGTCGTGGTGGCCGACTGCACCGCCAACACGATCGGCTGAATCGGCGTGTCGCCGGTTTGATCCCATGACC
GTGTTGCCGATCATGGTGGG

Downstream 100 bases:

>100_bases
GTTACTCCGCGAACCGGCGCTCGTACTCCTCCCGGAGCCGGGCGTGCTTGGGCCAGAACGCTTCCGGTTCCCGTCCCGCC
AGCCGTGCGGCCAGCAGGTC

Product: putative acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MQLSDGVISLRPATGAERSPIGISPPAAEAAEATGVTPDRIAAEAPIETFAIVRSADEEVVGTLGVRAEAPYLHRDQAEL
TYAVDPQWRGRGLATRAVVLGCRYVAAAGLAEEVVLRIDPANAASVAVARRARFKYLRSTDVEGEGPLDWYAQAV

Sequences:

>Translated_155_residues
MQLSDGVISLRPATGAERSPIGISPPAAEAAEATGVTPDRIAAEAPIETFAIVRSADEEVVGTLGVRAEAPYLHRDQAEL
TYAVDPQWRGRGLATRAVVLGCRYVAAAGLAEEVVLRIDPANAASVAVARRARFKYLRSTDVEGEGPLDWYAQAV
>Mature_155_residues
MQLSDGVISLRPATGAERSPIGISPPAAEAAEATGVTPDRIAAEAPIETFAIVRSADEEVVGTLGVRAEAPYLHRDQAEL
TYAVDPQWRGRGLATRAVVLGCRYVAAAGLAEEVVLRIDPANAASVAVARRARFKYLRSTDVEGEGPLDWYAQAV

Specific function: Unknown

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16399; Mature: 16399

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLSDGVISLRPATGAERSPIGISPPAAEAAEATGVTPDRIAAEAPIETFAIVRSADEEV
CCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHCCCCHHHHHHHHCCCHHH
VGTLGVRAEAPYLHRDQAELTYAVDPQWRGRGLATRAVVLGCRYVAAAGLAEEVVLRIDP
HHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
ANAASVAVARRARFKYLRSTDVEGEGPLDWYAQAV
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECC
>Mature Secondary Structure
MQLSDGVISLRPATGAERSPIGISPPAAEAAEATGVTPDRIAAEAPIETFAIVRSADEEV
CCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHCCCCHHHHHHHHCCCHHH
VGTLGVRAEAPYLHRDQAELTYAVDPQWRGRGLATRAVVLGCRYVAAAGLAEEVVLRIDP
HHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
ANAASVAVARRARFKYLRSTDVEGEGPLDWYAQAV
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA