Definition Nocardia farcinica IFM 10152 chromosome, complete genome.
Accession NC_006361
Length 6,021,225

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The map label for this gene is 54025423

Identifier: 54025423

GI number: 54025423

Start: 3659611

End: 3660486

Strand: Reverse

Name: 54025423

Synonym: nfa34530

Alternate gene names: NA

Gene position: 3660486-3659611 (Counterclockwise)

Preceding gene: 54025432

Following gene: 54025422

Centisome position: 60.79

GC content: 68.95

Gene sequence:

>876_bases
ATGGGTACTGCCGCGTATACCGAGCAGGCGCATGCGATCCACCCCCGCGATGTCGCCTTCGACTTCTCCACCGTGCCGAT
GCACTACATCCCCGGCGAGGTGATGGCCACCCACATCATCAACGTGATGCATCTGGTGCTGCCCGAGGGGGAACGGGCGA
TGGCCGCCGCCCTGGCCGAGGCCTTGCCGCTGATCTCCGACGAACGGCTGGCCGAGGAGGTGCGTGGTTTCATCGGCCAG
GAGGCCATGCACGCCAGCTCCCATGAAGAGGCACGCCGGCAGCTCGAGCGGCTCGGCCTCGAGGTCGGGCCGATGGTCGA
GCTGGTCGCCTGGCTGGTCGACCGCGTGCTCGGCGACCACGGACTCACCGGCAAGGCGGCGCACGCCTGGCTGTGCGAAC
GGCTGGCGCTGTTCGCGGGCATGGAGCACTACACGGCCGTGATCGGGGAATGGCTGCTCACCAACGACGTGCTCGAGGAC
AAGGGTATGCACCCGGCCATGCTGGATCTGATCCGCTGGCACGGCGCCGAGGAAGTGGAGCATCGCAGCGTGGTCTACGA
CGCCTACATGCACGTCGACGGCAGCTACGCCCGCAAGGCGCGGCAGGCGCTGATCGCGAGCATGGGCCTGCTGGTGCTGT
TCATCGCCTCCGGCGGCTACCTGTTCGCCAAGGATCCCTCGCCGCGCAAGGGCCGCTGGTGGCCGCTGCAGCTGGCGAGC
GCGTCCCTGCGCGGCGTGGTGCCCAGCTTCACCACCTTCTTCACCGAGATCCCGCGCTACCTGCGCCCGGGCTTCCATCC
CTCCCAGCTCGGCCCGATGGACAACGCGCTGCGCTACCTGGCCACTTCGCCCGCCGCCCGCGGCGGACAGTCATGA

Upstream 100 bases:

>100_bases
TCACACCGAAAAGTTGACATCACCTGATGTTGACATTGACTGATGTCAGCAAATATCGTCTAGTTCTCCGGTTTCAACGA
CGAGACGTGAGGACAGTCCG

Downstream 100 bases:

>100_bases
CCACCGGCTACCGGCCCGGTGCCGGCATCCGGTTGATCGTCTCGGCCACCGACGCCTACAAACGGTTGTTCGTGCAGAGT
CCGGCCGCGCCGTTGCTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase-Like Protein; FF Domain-Containing Protein; Conserved Protein UCP; FF Domain Protein; Phthalate 4 5-Dioxygenase; Metal Hydrolase

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MGTAAYTEQAHAIHPRDVAFDFSTVPMHYIPGEVMATHIINVMHLVLPEGERAMAAALAEALPLISDERLAEEVRGFIGQ
EAMHASSHEEARRQLERLGLEVGPMVELVAWLVDRVLGDHGLTGKAAHAWLCERLALFAGMEHYTAVIGEWLLTNDVLED
KGMHPAMLDLIRWHGAEEVEHRSVVYDAYMHVDGSYARKARQALIASMGLLVLFIASGGYLFAKDPSPRKGRWWPLQLAS
ASLRGVVPSFTTFFTEIPRYLRPGFHPSQLGPMDNALRYLATSPAARGGQS

Sequences:

>Translated_291_residues
MGTAAYTEQAHAIHPRDVAFDFSTVPMHYIPGEVMATHIINVMHLVLPEGERAMAAALAEALPLISDERLAEEVRGFIGQ
EAMHASSHEEARRQLERLGLEVGPMVELVAWLVDRVLGDHGLTGKAAHAWLCERLALFAGMEHYTAVIGEWLLTNDVLED
KGMHPAMLDLIRWHGAEEVEHRSVVYDAYMHVDGSYARKARQALIASMGLLVLFIASGGYLFAKDPSPRKGRWWPLQLAS
ASLRGVVPSFTTFFTEIPRYLRPGFHPSQLGPMDNALRYLATSPAARGGQS
>Mature_290_residues
GTAAYTEQAHAIHPRDVAFDFSTVPMHYIPGEVMATHIINVMHLVLPEGERAMAAALAEALPLISDERLAEEVRGFIGQE
AMHASSHEEARRQLERLGLEVGPMVELVAWLVDRVLGDHGLTGKAAHAWLCERLALFAGMEHYTAVIGEWLLTNDVLEDK
GMHPAMLDLIRWHGAEEVEHRSVVYDAYMHVDGSYARKARQALIASMGLLVLFIASGGYLFAKDPSPRKGRWWPLQLASA
SLRGVVPSFTTFFTEIPRYLRPGFHPSQLGPMDNALRYLATSPAARGGQS

Specific function: Unknown

COG id: COG3687

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32171; Mature: 32040

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTAAYTEQAHAIHPRDVAFDFSTVPMHYIPGEVMATHIINVMHLVLPEGERAMAAALAE
CCCCCCCCHHHCCCCCCCEECCCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ALPLISDERLAEEVRGFIGQEAMHASSHEEARRQLERLGLEVGPMVELVAWLVDRVLGDH
HHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
GLTGKAAHAWLCERLALFAGMEHYTAVIGEWLLTNDVLEDKGMHPAMLDLIRWHGAEEVE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH
HRSVVYDAYMHVDGSYARKARQALIASMGLLVLFIASGGYLFAKDPSPRKGRWWPLQLAS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHH
ASLRGVVPSFTTFFTEIPRYLRPGFHPSQLGPMDNALRYLATSPAARGGQS
HHHHCCCHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GTAAYTEQAHAIHPRDVAFDFSTVPMHYIPGEVMATHIINVMHLVLPEGERAMAAALAE
CCCCCCCHHHCCCCCCCEECCCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ALPLISDERLAEEVRGFIGQEAMHASSHEEARRQLERLGLEVGPMVELVAWLVDRVLGDH
HHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
GLTGKAAHAWLCERLALFAGMEHYTAVIGEWLLTNDVLEDKGMHPAMLDLIRWHGAEEVE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH
HRSVVYDAYMHVDGSYARKARQALIASMGLLVLFIASGGYLFAKDPSPRKGRWWPLQLAS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHH
ASLRGVVPSFTTFFTEIPRYLRPGFHPSQLGPMDNALRYLATSPAARGGQS
HHHHCCCHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA