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The map label for this gene is glpD

Identifier: 54020618

GI number: 54020618

Start: 758307

End: 759470

Strand: Reverse

Name: glpD

Synonym: mhp606

Alternate gene names: 54020618

Gene position: 759470-758307 (Counterclockwise)

Preceding gene: 54020619

Following gene: 54020617

Centisome position: 85.07

GC content: 31.87

Gene sequence:

>1164_bases
ATGACAGAAAAAAATAATATAAATTACGATGTAATTATTATTGGTTCGGGAATTATTGGAACTAATATTGCTTATGAACT
TAGTAAATTTGAGCTTAAAATTGCGCTTTTAGAAGCAAAAAAATACCCAGCATCTGAAACAACAACAGGAAATTCAGGGA
TAATTCATTGTGGTTTTGATCCAAGTCCAGGAAAATTAAAAGCAAAATTCAATGTTTTAGGCCATAAATTATGGACTGAA
AATATTTTTAAAAAAATTATTTTTCCGCGCCAAAAAGCCAAAAGCGTAGTTTTGGCATTTGATTCTGAAGAAGAAAAAAT
AATTTATGATCTTTACAAACGTGGAATTATTAACGGTCTTGATCCTAAAAACTTATCGATTTTAAGCAAAAAAGAACTTA
AATTAGCGCATCCAGATGTATCAGAAGAAGCAGTCTTAGCGCTTGAGTGCTTGAATTCCTGGGTGGTAGATCCAGTTAAG
GCCGCGTATGCTTTTTTGGAAATTTCTAGGAAAAATGGTTTAGAATTTTTTAGTAGCTCAAAAGTTATTTCAATTTCTAA
AAATAGTCAAAATTTTTTCCTAATTAAAACAGAAAACCAAAATAATCCTTTTTTTCAGTCAAAAATTATAATAAATGCCG
CCGGTCATTATGCCGATGAAATTGGAAAAATAGCCGGTTTTGGCGAATTTAGTCAAAAACAAAGGCGCGGTCAATATTTA
ATTTTAAAAAATCACCCCAATATAAAAAATATTTATTTTTTAGTCCCTTCAAAATACGGAAAAGGAGTAATCGTTGCGCC
TCGACCAGACGGAAACATCTTAGTTGGCCCAACAGCTAAAGAAAATATACCGAAAAATAAGGTAAATTGCCTTGATTTTA
ATCTGAATGAAGAAATTCAAAAAATTGGGCATAAAATAATTCCTAGCCTTAATTATTCAGAAACGGTTTTTGCTTTAGCC
GGTTCACGTCCGATCGAAGCTGACAAAGGTGATTTTGTGATTAAACCAGCTTTTAATGACCCAAATTTTATTTTTGCTGC
CGGAATGCAGTCCCCAGGTTTATCAGCTTCCCCAGCAATTGCTCTTGAAATAGTCAATTTTGTAAAAAATCGGATTGATT
TGGTTAAAAAAACCGAATTAGTTGAAGCTATTGAATATATCTAA

Upstream 100 bases:

>100_bases
CAATTAAATTTAATCAATACAAGAACAAAAAAACATTAAAATCAAAAATTTTAGTTATAATTTATATTATAGAACTGTTT
TTTAGGGGAAGAATTACATT

Downstream 100 bases:

>100_bases
ATTAATTCTGGCTAAAATAGATATAATATTTAAATTTATCTATAAATTAAAGTATTTTTCAAATTAACCAGAAAATTTAA
ATAAAAATTTTTTGGTTAAT

Product: glycerol-3-phosphate dehydrogenase

Products: glycerone phosphate; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MTEKNNINYDVIIIGSGIIGTNIAYELSKFELKIALLEAKKYPASETTTGNSGIIHCGFDPSPGKLKAKFNVLGHKLWTE
NIFKKIIFPRQKAKSVVLAFDSEEEKIIYDLYKRGIINGLDPKNLSILSKKELKLAHPDVSEEAVLALECLNSWVVDPVK
AAYAFLEISRKNGLEFFSSSKVISISKNSQNFFLIKTENQNNPFFQSKIIINAAGHYADEIGKIAGFGEFSQKQRRGQYL
ILKNHPNIKNIYFLVPSKYGKGVIVAPRPDGNILVGPTAKENIPKNKVNCLDFNLNEEIQKIGHKIIPSLNYSETVFALA
GSRPIEADKGDFVIKPAFNDPNFIFAAGMQSPGLSASPAIALEIVNFVKNRIDLVKKTELVEAIEYI

Sequences:

>Translated_387_residues
MTEKNNINYDVIIIGSGIIGTNIAYELSKFELKIALLEAKKYPASETTTGNSGIIHCGFDPSPGKLKAKFNVLGHKLWTE
NIFKKIIFPRQKAKSVVLAFDSEEEKIIYDLYKRGIINGLDPKNLSILSKKELKLAHPDVSEEAVLALECLNSWVVDPVK
AAYAFLEISRKNGLEFFSSSKVISISKNSQNFFLIKTENQNNPFFQSKIIINAAGHYADEIGKIAGFGEFSQKQRRGQYL
ILKNHPNIKNIYFLVPSKYGKGVIVAPRPDGNILVGPTAKENIPKNKVNCLDFNLNEEIQKIGHKIIPSLNYSETVFALA
GSRPIEADKGDFVIKPAFNDPNFIFAAGMQSPGLSASPAIALEIVNFVKNRIDLVKKTELVEAIEYI
>Mature_386_residues
TEKNNINYDVIIIGSGIIGTNIAYELSKFELKIALLEAKKYPASETTTGNSGIIHCGFDPSPGKLKAKFNVLGHKLWTEN
IFKKIIFPRQKAKSVVLAFDSEEEKIIYDLYKRGIINGLDPKNLSILSKKELKLAHPDVSEEAVLALECLNSWVVDPVKA
AYAFLEISRKNGLEFFSSSKVISISKNSQNFFLIKTENQNNPFFQSKIIINAAGHYADEIGKIAGFGEFSQKQRRGQYLI
LKNHPNIKNIYFLVPSKYGKGVIVAPRPDGNILVGPTAKENIPKNKVNCLDFNLNEEIQKIGHKIIPSLNYSETVFALAG
SRPIEADKGDFVIKPAFNDPNFIFAAGMQSPGLSASPAIALEIVNFVKNRIDLVKKTELVEAIEYI

Specific function: Unknown

COG id: COG0579

COG function: function code R; Predicted dehydrogenase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI13376331, Length=398, Percent_Identity=25.6281407035176, Blast_Score=89, Evalue=7e-18,
Organism=Escherichia coli, GI87082148, Length=278, Percent_Identity=24.8201438848921, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17565764, Length=413, Percent_Identity=26.634382566586, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24585081, Length=284, Percent_Identity=28.169014084507, Blast_Score=77, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: 1.1.99.5

Molecular weight: Translated: 43008; Mature: 42877

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKNNINYDVIIIGSGIIGTNIAYELSKFELKIALLEAKKYPASETTTGNSGIIHCGFD
CCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCC
PSPGKLKAKFNVLGHKLWTENIFKKIIFPRQKAKSVVLAFDSEEEKIIYDLYKRGIINGL
CCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCC
DPKNLSILSKKELKLAHPDVSEEAVLALECLNSWVVDPVKAAYAFLEISRKNGLEFFSSS
CCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCEEECCC
KVISISKNSQNFFLIKTENQNNPFFQSKIIINAAGHYADEIGKIAGFGEFSQKQRRGQYL
CEEEEECCCCEEEEEEECCCCCCEEEEEEEEEECCHHHHHHHHHCCCCHHHHHHHCCCEE
ILKNHPNIKNIYFLVPSKYGKGVIVAPRPDGNILVGPTAKENIPKNKVNCLDFNLNEEIQ
EEECCCCCCEEEEEEECCCCCEEEEEECCCCCEEECCCCCCCCCCCCCEEEECCCCHHHH
KIGHKIIPSLNYSETVFALAGSRPIEADKGDFVIKPAFNDPNFIFAAGMQSPGLSASPAI
HHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCHH
ALEIVNFVKNRIDLVKKTELVEAIEYI
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TEKNNINYDVIIIGSGIIGTNIAYELSKFELKIALLEAKKYPASETTTGNSGIIHCGFD
CCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCEEEECCC
PSPGKLKAKFNVLGHKLWTENIFKKIIFPRQKAKSVVLAFDSEEEKIIYDLYKRGIINGL
CCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCC
DPKNLSILSKKELKLAHPDVSEEAVLALECLNSWVVDPVKAAYAFLEISRKNGLEFFSSS
CCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCCEEECCC
KVISISKNSQNFFLIKTENQNNPFFQSKIIINAAGHYADEIGKIAGFGEFSQKQRRGQYL
CEEEEECCCCEEEEEEECCCCCCEEEEEEEEEECCHHHHHHHHHCCCCHHHHHHHCCCEE
ILKNHPNIKNIYFLVPSKYGKGVIVAPRPDGNILVGPTAKENIPKNKVNCLDFNLNEEIQ
EEECCCCCCEEEEEEECCCCCEEEEEECCCCCEEECCCCCCCCCCCCCEEEECCCCHHHH
KIGHKIIPSLNYSETVFALAGSRPIEADKGDFVIKPAFNDPNFIFAAGMQSPGLSASPAI
HHHHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCHH
ALEIVNFVKNRIDLVKKTELVEAIEYI
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: sn-glycerol 3-phosphate; acceptor

Specific reaction: sn-glycerol 3-phosphate + acceptor = glycerone phosphate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7569993 [H]