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The map label for this gene is 54020609

Identifier: 54020609

GI number: 54020609

Start: 745688

End: 746359

Strand: Reverse

Name: 54020609

Synonym: mhp596

Alternate gene names: NA

Gene position: 746359-745688 (Counterclockwise)

Preceding gene: 54020610

Following gene: 54020608

Centisome position: 83.6

GC content: 22.92

Gene sequence:

>672_bases
ATGAATTGAAAAAAAACTATAAATTTCGATGTTTTTCCAAAAAATATAAGGGAAAAATTGACAAATTACCAACTGATTTC
TTGTGGTTATCATAACTGCAGTTTTCTAGGGTTTTTTAAGAATCATAAAGTTCAAATTCGAATTGCTATTAACAATTTTG
TAAATTGAAAAAATGAGGAGAATTTCATCAGAAATAATCCTAATTTTTTCTTTTACACCAAAGGTAATTTTATTAAAAAA
TGGATAGAGGGCGAAATTTTAAGCCCTAAAAATTTAGAAACTAATCTGCAGAAACTATTTTTTGCAGTCTTGGAATTTCA
TATGCAAAAAAATGAGAAGATTGCTAAATTTGACTGAAACGTTAGTGAAATAATAGATAAAAAATATATAAAATTAGTGC
AGAAATACCAATTTGATCAACTTGTAATTTCTCATAACGATTTACAATTTAAAAATATTATTACCTCAGATAAACACGTT
TTTCTACTAGATTTTGAGTGGGTTAGACTAAATAATCCTTATTTTGATTATGTCTGTTTATATATTAATTTAGGAATTTC
TCCTGAAAAAATCATTGAATTTTTTAATTTGGAAACTGAAAAATTCAATGATTTTGTTTATTTAGTTAATGTTTTTACTA
ATTTTTGAAATAAAAAATTTTATAATAAATAA

Upstream 100 bases:

>100_bases
ACAGAATTAAAGGAATTTCTGATCATACAATGGTTTATTTTGATCTTGAATTAGGCCAAAACAGTCAGAATTAAAAATTT
TTTTTATTTTTTAATGACTA

Downstream 100 bases:

>100_bases
TGTAAACTAAAAAAACTTAATTATAGGGTTTTTTGCGCGTTTCACTGACTTTTAAGCCATAAAAATTATAAATTTATTAC
TAAAAAACACTTCAAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF499 [H]

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNWKKTINFDVFPKNIREKLTNYQLISCGYHNCSFLGFFKNHKVQIRIAINNFVNWKNEENFIRNNPNFFFYTKGNFIKK
WIEGEILSPKNLETNLQKLFFAVLEFHMQKNEKIAKFDWNVSEIIDKKYIKLVQKYQFDQLVISHNDLQFKNIITSDKHV
FLLDFEWVRLNNPYFDYVCLYINLGISPEKIIEFFNLETEKFNDFVYLVNVFTNFWNKKFYNK

Sequences:

>Translated_223_residues
MN*KKTINFDVFPKNIREKLTNYQLISCGYHNCSFLGFFKNHKVQIRIAINNFVN*KNEENFIRNNPNFFFYTKGNFIKK
WIEGEILSPKNLETNLQKLFFAVLEFHMQKNEKIAKFD*NVSEIIDKKYIKLVQKYQFDQLVISHNDLQFKNIITSDKHV
FLLDFEWVRLNNPYFDYVCLYINLGISPEKIIEFFNLETEKFNDFVYLVNVFTNF*NKKFYNK
>Mature_223_residues
MN*KKTINFDVFPKNIREKLTNYQLISCGYHNCSFLGFFKNHKVQIRIAINNFVN*KNEENFIRNNPNFFFYTKGNFIKK
WIEGEILSPKNLETNLQKLFFAVLEFHMQKNEKIAKFD*NVSEIIDKKYIKLVQKYQFDQLVISHNDLQFKNIITSDKHV
FLLDFEWVRLNNPYFDYVCLYINLGISPEKIIEFFNLETEKFNDFVYLVNVFTNF*NKKFYNK

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002573
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01633 Choline_kinase [H]

EC number: NA

Molecular weight: Translated: 26434; Mature: 26434

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKTINFDVFPKNIREKLTNYQLISCGYHNCSFLGFFKNHKVQIRIAINNFVNKNEENF
CCCEEEEEEECCHHHHHHHCCEEEEEECCCCCEEEEEECCCEEEEEEEEECCCCCCCCCC
IRNNPNFFFYTKGNFIKKWIEGEILSPKNLETNLQKLFFAVLEFHMQKNEKIAKFDNVSE
CCCCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHH
IIDKKYIKLVQKYQFDQLVISHNDLQFKNIITSDKHVFLLDFEWVRLNNPYFDYVCLYIN
HHHHHHHHHHHHHCCCEEEEECCCEEEEHEECCCCEEEEEEEEEEEECCCCHHEEEEEEE
LGISPEKIIEFFNLETEKFNDFVYLVNVFTNFNKKFYNK
CCCCHHHHHHHHCCCCHHCCCEEEEEEHHHHHHHHHCCC
>Mature Secondary Structure
MNKKTINFDVFPKNIREKLTNYQLISCGYHNCSFLGFFKNHKVQIRIAINNFVNKNEENF
CCCEEEEEEECCHHHHHHHCCEEEEEECCCCCEEEEEECCCEEEEEEEEECCCCCCCCCC
IRNNPNFFFYTKGNFIKKWIEGEILSPKNLETNLQKLFFAVLEFHMQKNEKIAKFDNVSE
CCCCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHH
IIDKKYIKLVQKYQFDQLVISHNDLQFKNIITSDKHVFLLDFEWVRLNNPYFDYVCLYIN
HHHHHHHHHHHHHCCCEEEEECCCEEEEHEECCCCEEEEEEEEEEEECCCCHHEEEEEEE
LGISPEKIIEFFNLETEKFNDFVYLVNVFTNFNKKFYNK
CCCCHHHHHHHHCCCCHHCCCEEEEEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7521872 [H]