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The map label for this gene is frr

Identifier: 54020577

GI number: 54020577

Start: 698629

End: 699189

Strand: Reverse

Name: frr

Synonym: mhp551

Alternate gene names: 54020577

Gene position: 699189-698629 (Counterclockwise)

Preceding gene: 54020578

Following gene: 54020576

Centisome position: 78.32

GC content: 28.88

Gene sequence:

>561_bases
ATGAAGAACGAAATTGAATTTAGTTTTTATAAAAACATCTTGATTGAAAAAGCTCAAGATGTTTTTTCCTATCTTGAAAA
AAGTTTTCAGAAAGTAACTATTGGAGCTCCAAATCCACAGTTAATTTCTTATATTAAAGTAAATTTTTATGATGTTTTAA
CCCCAATTAACGAAATCGCTTCAATTTCTGCTCCACTTCCATTACAACTTTTAGTAAAACCTTATGAAACTAAGTATGTA
AAAGAAATTGCAAGCGCAATTGTAGCTGCAAAAATTGATGCCCAAGTTCAAAAAGAAGCAAATCAAGTTCGACTAATTTT
TCCAGAACCAACTCACCAAAAACGCCAAGAAGCAATTCATAAACTTAAAAAAATTCACGAGGAAGGCAAAGTAAGAATGC
GTCTGATCCGACAAGATATTAACAAACTGATAAAAAAAGAGGAATTCTCTGAGGATTTAGAAAAAGATTATCTTGGTCAA
GTTCAGAAAAATATTAATTCTGAAATAGAAAAAATTGATCAACTTTTTGATAAAAAAGTAAAAGCAATTCAAACAATTTA
A

Upstream 100 bases:

>100_bases
TGATAATAAAATTAAATTACTAATTTTTGATATTAAAGAAAAAAATAGCATTTCTAAATTAATCAAAAGACAAATTAAAC
ACACGGAGGTTTATTAAATA

Downstream 100 bases:

>100_bases
AATGAGCCTATCCTGGCCTAAAAAATTACCAGCTGATTTTTTTATCAGGTTTTTAGTTGCTTTTTTAGTTTTAGTAGTTG
TTTTCCCGGCTTTATTTATT

Product: ribosome recycling factor

Products: NA

Alternate protein names: RRF; Ribosome-releasing factor [H]

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKNEIEFSFYKNILIEKAQDVFSYLEKSFQKVTIGAPNPQLISYIKVNFYDVLTPINEIASISAPLPLQLLVKPYETKYV
KEIASAIVAAKIDAQVQKEANQVRLIFPEPTHQKRQEAIHKLKKIHEEGKVRMRLIRQDINKLIKKEEFSEDLEKDYLGQ
VQKNINSEIEKIDQLFDKKVKAIQTI

Sequences:

>Translated_186_residues
MKNEIEFSFYKNILIEKAQDVFSYLEKSFQKVTIGAPNPQLISYIKVNFYDVLTPINEIASISAPLPLQLLVKPYETKYV
KEIASAIVAAKIDAQVQKEANQVRLIFPEPTHQKRQEAIHKLKKIHEEGKVRMRLIRQDINKLIKKEEFSEDLEKDYLGQ
VQKNINSEIEKIDQLFDKKVKAIQTI
>Mature_186_residues
MKNEIEFSFYKNILIEKAQDVFSYLEKSFQKVTIGAPNPQLISYIKVNFYDVLTPINEIASISAPLPLQLLVKPYETKYV
KEIASAIVAAKIDAQVQKEANQVRLIFPEPTHQKRQEAIHKLKKIHEEGKVRMRLIRQDINKLIKKEEFSEDLEKDYLGQ
VQKNINSEIEKIDQLFDKKVKAIQTI

Specific function: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another [H]

COG id: COG0233

COG function: function code J; Ribosome recycling factor

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RRF family [H]

Homologues:

Organism=Escherichia coli, GI1786368, Length=161, Percent_Identity=25.4658385093168, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002661
- InterPro:   IPR015998 [H]

Pfam domain/function: PF01765 RRF [H]

EC number: NA

Molecular weight: Translated: 21642; Mature: 21642

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNEIEFSFYKNILIEKAQDVFSYLEKSFQKVTIGAPNPQLISYIKVNFYDVLTPINEIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
SISAPLPLQLLVKPYETKYVKEIASAIVAAKIDAQVQKEANQVRLIFPEPTHQKRQEAIH
HCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
KLKKIHEEGKVRMRLIRQDINKLIKKEEFSEDLEKDYLGQVQKNINSEIEKIDQLFDKKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAIQTI
HHHHCC
>Mature Secondary Structure
MKNEIEFSFYKNILIEKAQDVFSYLEKSFQKVTIGAPNPQLISYIKVNFYDVLTPINEIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
SISAPLPLQLLVKPYETKYVKEIASAIVAAKIDAQVQKEANQVRLIFPEPTHQKRQEAIH
HCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHH
KLKKIHEEGKVRMRLIRQDINKLIKKEEFSEDLEKDYLGQVQKNINSEIEKIDQLFDKKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAIQTI
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11353084 [H]