Click here to switch to the map view.

The map label for this gene is 54020041

Identifier: 54020041

GI number: 54020041

Start: 116100

End: 116915

Strand: Direct

Name: 54020041

Synonym: mhp101

Alternate gene names: NA

Gene position: 116100-116915 (Clockwise)

Preceding gene: 54020040

Following gene: 54020042

Centisome position: 13.0

GC content: 27.82

Gene sequence:

>816_bases
ATGAGTGTTCTAACCATTTCAAAAAATTTTAAATTAACTCACATTGAAAAATTAATTATCCGATTTATTGAAACAAAACC
ACGAAAATTTGTTGAGCAAACTATCAATGAACTTGCAGCAACCTTATTTATAAGTGTCGGAACAATTACACAATTAACAA
AAAAGCTTGGATTTAACAATTTCAAAGAATTAAAAAAATTCGTAATTGAATGACTTAAGCTTGATGAGGATAATAATTTA
TATAACGAAAACGACCAAATTGAAAATATTAACCTGCTTTATGTACACAGTATCGAGAAAACACTAGCAATTCTTAATGT
TTCGCAAATTAATCGAATTGTTGATACTATTCTTAAAATGGATAAAATTATTACTTATGGCACAGCCTCTTCAATAACTG
TTGCTACAGAATTTTCAAATAATCTTAGAAATTTACACCTTAATAGCCTATGCGCAAAAAATATTTCCGATATTGCCTCA
TGGATTGGCAATCCTGGTAGTACTTGCCTCGTTATTTTTTCGGTTTCAATGGCTTCACGCGATGCAGTTGCGCTTACTAA
ATTGGCAAAACAACACCAAATAAACACCATTTTTATAACTTCAAATACAAATTTGGAAAAGAATTCATTCTCAGAAGTAG
TTTATTTTGATACTTTAGAACAAAATAATAGTATTTTTCCAGTTGGTTCTAAAGTATCACAACTTTTTATTGGTGATCTA
ATTTCGTTAAAAATTCGAAAAAAATTAAATAGTTCTCGTTCAGAATTTTTTAATGAATTTAGACGTCTTTGGTATAAAAA
AATTAAAAATCATTAA

Upstream 100 bases:

>100_bases
ATTCCTATAAAAGTTAAGTATATTTTAATTTTTTAATATTTTAAAAATTTTTAAGATTTTTTTTTAAAAATTTTTAAAAA
TAGTGTAAAATTGTTAAATT

Downstream 100 bases:

>100_bases
TTTTTTTATAATTTTTTAGAAAAAAATCTTTAGCAATTTCTATATCATCATTTCTGAGATTATTAGTATGGTTTGAATAA
ATATAACGAATTTGCTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSVLTISKNFKLTHIEKLIIRFIETKPRKFVEQTINELAATLFISVGTITQLTKKLGFNNFKELKKFVIEWLKLDEDNNL
YNENDQIENINLLYVHSIEKTLAILNVSQINRIVDTILKMDKIITYGTASSITVATEFSNNLRNLHLNSLCAKNISDIAS
WIGNPGSTCLVIFSVSMASRDAVALTKLAKQHQINTIFITSNTNLEKNSFSEVVYFDTLEQNNSIFPVGSKVSQLFIGDL
ISLKIRKKLNSSRSEFFNEFRRLWYKKIKNH

Sequences:

>Translated_271_residues
MSVLTISKNFKLTHIEKLIIRFIETKPRKFVEQTINELAATLFISVGTITQLTKKLGFNNFKELKKFVIE*LKLDEDNNL
YNENDQIENINLLYVHSIEKTLAILNVSQINRIVDTILKMDKIITYGTASSITVATEFSNNLRNLHLNSLCAKNISDIAS
WIGNPGSTCLVIFSVSMASRDAVALTKLAKQHQINTIFITSNTNLEKNSFSEVVYFDTLEQNNSIFPVGSKVSQLFIGDL
ISLKIRKKLNSSRSEFFNEFRRLWYKKIKNH
>Mature_270_residues
SVLTISKNFKLTHIEKLIIRFIETKPRKFVEQTINELAATLFISVGTITQLTKKLGFNNFKELKKFVIE*LKLDEDNNLY
NENDQIENINLLYVHSIEKTLAILNVSQINRIVDTILKMDKIITYGTASSITVATEFSNNLRNLHLNSLCAKNISDIASW
IGNPGSTCLVIFSVSMASRDAVALTKLAKQHQINTIFITSNTNLEKNSFSEVVYFDTLEQNNSIFPVGSKVSQLFIGDLI
SLKIRKKLNSSRSEFFNEFRRLWYKKIKNH

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30855; Mature: 30724

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLTISKNFKLTHIEKLIIRFIETKPRKFVEQTINELAATLFISVGTITQLTKKLGFNN
CEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FKELKKFVIELKLDEDNNLYNENDQIENINLLYVHSIEKTLAILNVSQINRIVDTILKMD
HHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
KIITYGTASSITVATEFSNNLRNLHLNSLCAKNISDIASWIGNPGSTCLVIFSVSMASRD
HHHEECCCCCEEEEEHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCCCH
AVALTKLAKQHQINTIFITSNTNLEKNSFSEVVYFDTLEQNNSIFPVGSKVSQLFIGDLI
HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCEECCCHHHHHHHHHHHH
SLKIRKKLNSSRSEFFNEFRRLWYKKIKNH
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVLTISKNFKLTHIEKLIIRFIETKPRKFVEQTINELAATLFISVGTITQLTKKLGFNN
EEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FKELKKFVIELKLDEDNNLYNENDQIENINLLYVHSIEKTLAILNVSQINRIVDTILKMD
HHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
KIITYGTASSITVATEFSNNLRNLHLNSLCAKNISDIASWIGNPGSTCLVIFSVSMASRD
HHHEECCCCCEEEEEHHHCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEECCCCCH
AVALTKLAKQHQINTIFITSNTNLEKNSFSEVVYFDTLEQNNSIFPVGSKVSQLFIGDLI
HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCEECCCHHHHHHHHHHHH
SLKIRKKLNSSRSEFFNEFRRLWYKKIKNH
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA