| Definition | Mycoplasma hyopneumoniae 232, complete genome. |
|---|---|
| Accession | NC_006360 |
| Length | 892,758 |
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The map label for this gene is 54020031
Identifier: 54020031
GI number: 54020031
Start: 105217
End: 106224
Strand: Direct
Name: 54020031
Synonym: mhp090
Alternate gene names: NA
Gene position: 105217-106224 (Clockwise)
Preceding gene: 54020030
Following gene: 54020032
Centisome position: 11.79
GC content: 21.13
Gene sequence:
>1008_bases TTGAGACTTGGACCATCCTGAGCAATTCCAGGGGTAATTTCTTTTTATCTTGTTAGTAAAAATTTTTATGATTATCCTAA TCAGGATTGAATAGCGAAAATGAATGCTATAAAAAAATGATTTCTTGATTTTGACAAAAATAGGGATTTAGCTTTTTATG TTTGACCAATAATTAATTATTATTTTTATAATAAGGATAATTTAGACTTTGAAATTACTAAAAAAACAGAAGACTTAGTT AATTACAACTTTGATTATCAATTATTTCCAAATAAACCTGATATTTCACAGACAATTTTTTTATATCAAATTTTTGATTC TGAAAATAAAAAAAATAATGTAAATTCAAAATTGAAACCAACAATTGAAGACTATTTTAATAAAACATTAAAGCAGGCAC AAAATTATGATGATTTCTTTTTAGATTTATATAATTTTGTATTTTTTAAGGTAAGATACGATTCTAATTTGTTTATACTT AACAATGATTTTTTAGAAAATATTTTAAGCTATGCTAAATTTGTTAAAAATCCAGTTGATTTTTTCTATTTTTTCAAAAC AGTCGCATTATTGAGTGCTTTTCTTGATACAAAAACAAAAATTACAATTTCTGAAGCAGTGGCAAACAATGTTATTAATG CAAAATTAGAAAAAAATTCACCTTTTTTATTTAAATTTATTAATTTATTTTTAAAATTTATAGTAAAAAATGAATTTATC AATGATAAAGAAATTGTTGATTACCTAAACGCAAATCTTGAGGTCAAAAATATAAAAAATCCGCAATTTTTTGAATTATT GTTTCTTTATCTTGAATTTATAAAATCAATTAAAATAATTTCAGAAAATAAACTTGATTATAAGAAGTTAGAAAATTTTA TCTTGGGTATAAAAAATGAAATTTTTCAGGAAATTAGTAAAAAGAGTGGCAAAACACCATTTTTAAATATTAAAACAATT TATCTAGCATATCAAATTGATTGGTTAGTAAAAAATGGTACAAATTAA
Upstream 100 bases:
>100_bases TTGGAGGATTATGCCGAATTTATTGCTCCTGAACTTACAAAGTGACTTAAAAAAAATTTTTTGGATATTAACAACTTAAA TATTTATGGGGCAGTTCAGT
Downstream 100 bases:
>100_bases AAATTTGACGAAAAAATTTGGCCCAAGAAAAATTTTTGATAATTTTAGTCTTGAAATTCCCGAAAATAAACTTGTTTTTA TAACCGGAGAATCTGGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MRLGPSWAIPGVISFYLVSKNFYDYPNQDWIAKMNAIKKWFLDFDKNRDLAFYVWPIINYYFYNKDNLDFEITKKTEDLV NYNFDYQLFPNKPDISQTIFLYQIFDSENKKNNVNSKLKPTIEDYFNKTLKQAQNYDDFFLDLYNFVFFKVRYDSNLFIL NNDFLENILSYAKFVKNPVDFFYFFKTVALLSAFLDTKTKITISEAVANNVINAKLEKNSPFLFKFINLFLKFIVKNEFI NDKEIVDYLNANLEVKNIKNPQFFELLFLYLEFIKSIKIISENKLDYKKLENFILGIKNEIFQEISKKSGKTPFLNIKTI YLAYQIDWLVKNGTN
Sequences:
>Translated_335_residues MRLGPS*AIPGVISFYLVSKNFYDYPNQD*IAKMNAIKK*FLDFDKNRDLAFYV*PIINYYFYNKDNLDFEITKKTEDLV NYNFDYQLFPNKPDISQTIFLYQIFDSENKKNNVNSKLKPTIEDYFNKTLKQAQNYDDFFLDLYNFVFFKVRYDSNLFIL NNDFLENILSYAKFVKNPVDFFYFFKTVALLSAFLDTKTKITISEAVANNVINAKLEKNSPFLFKFINLFLKFIVKNEFI NDKEIVDYLNANLEVKNIKNPQFFELLFLYLEFIKSIKIISENKLDYKKLENFILGIKNEIFQEISKKSGKTPFLNIKTI YLAYQIDWLVKNGTN >Mature_335_residues MRLGPS*AIPGVISFYLVSKNFYDYPNQD*IAKMNAIKK*FLDFDKNRDLAFYV*PIINYYFYNKDNLDFEITKKTEDLV NYNFDYQLFPNKPDISQTIFLYQIFDSENKKNNVNSKLKPTIEDYFNKTLKQAQNYDDFFLDLYNFVFFKVRYDSNLFIL NNDFLENILSYAKFVKNPVDFFYFFKTVALLSAFLDTKTKITISEAVANNVINAKLEKNSPFLFKFINLFLKFIVKNEFI NDKEIVDYLNANLEVKNIKNPQFFELLFLYLEFIKSIKIISENKLDYKKLENFILGIKNEIFQEISKKSGKTPFLNIKTI YLAYQIDWLVKNGTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39291; Mature: 39291
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGPSAIPGVISFYLVSKNFYDYPNQDIAKMNAIKKFLDFDKNRDLAFYVPIINYYFYN CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEC KDNLDFEITKKTEDLVNYNFDYQLFPNKPDISQTIFLYQIFDSENKKNNVNSKLKPTIED CCCCCEEEECCHHHHHCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHH YFNKTLKQAQNYDDFFLDLYNFVFFKVRYDSNLFILNNDFLENILSYAKFVKNPVDFFYF HHHHHHHHHCCCHHHHHHHHHHHEEEEEECCEEEEEECHHHHHHHHHHHHHCCHHHHHHH FKTVALLSAFLDTKTKITISEAVANNVINAKLEKNSPFLFKFINLFLKFIVKNEFINDKE HHHHHHHHHHHCCCCEEEHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHH IVDYLNANLEVKNIKNPQFFELLFLYLEFIKSIKIISENKLDYKKLENFILGIKNEIFQE HHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ISKKSGKTPFLNIKTIYLAYQIDWLVKNGTN HHHHCCCCCEEEEEEEEEEEEEEEEEECCCC >Mature Secondary Structure MRLGPSAIPGVISFYLVSKNFYDYPNQDIAKMNAIKKFLDFDKNRDLAFYVPIINYYFYN CCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEC KDNLDFEITKKTEDLVNYNFDYQLFPNKPDISQTIFLYQIFDSENKKNNVNSKLKPTIED CCCCCEEEECCHHHHHCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHH YFNKTLKQAQNYDDFFLDLYNFVFFKVRYDSNLFILNNDFLENILSYAKFVKNPVDFFYF HHHHHHHHHCCCHHHHHHHHHHHEEEEEECCEEEEEECHHHHHHHHHHHHHCCHHHHHHH FKTVALLSAFLDTKTKITISEAVANNVINAKLEKNSPFLFKFINLFLKFIVKNEFINDKE HHHHHHHHHHHCCCCEEEHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHH IVDYLNANLEVKNIKNPQFFELLFLYLEFIKSIKIISENKLDYKKLENFILGIKNEIFQE HHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH ISKKSGKTPFLNIKTIYLAYQIDWLVKNGTN HHHHCCCCCEEEEEEEEEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA