The gene/protein map for NC_006351 is currently unavailable.
Definition Burkholderia pseudomallei K96243 chromosome 2, complete sequence.
Accession NC_006351
Length 3,173,005

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The map label for this gene is yxnA [H]

Identifier: 53723260

GI number: 53723260

Start: 3013956

End: 3014771

Strand: Reverse

Name: yxnA [H]

Synonym: BPSS2242

Alternate gene names: 53723260

Gene position: 3014771-3013956 (Counterclockwise)

Preceding gene: 53723261

Following gene: 53723259

Centisome position: 95.01

GC content: 68.63

Gene sequence:

>816_bases
ATGAAATGCACGCTGAAGCCGATCGGCGAGCAGACGATCGTGATCACCGGCGCGACGAGCGGCATCGGGCTCGTCACCGC
GCGCAAGGCCGCGAAGAAGGGCGCGAAGCTCGTGCTCGTCGCGCGCAACGATACCGCGCTCGAGGCGCTGTGCGAGGAGA
TCCGCCAGCACGGCGGCCTCGCCGTCGCGGTCGCGGCCGACGTGAGCCGCTACGAGGACGTCCAGCGCGCGGCGGCGAAG
GCCGTCGAGACGTTCGGCGGCTTCGACACGTGGATCAACAACGCGGGCGTGACGATCTTCGGCTCCGCGCTGTCGGTGCC
GCTCGACGACCAGCGCCGGCTGTTCGATACGAACTACTGGGGCGTCGTGCATGGCTCGCTCGTCGCGTCCGAGCATTTTC
GCCGCCAGAGCGACTTTCGCGGCGGCGCGATCATCAACATGGGCAGCGAGGCGTCCGACGCGCCGGTGCCGCTGCAAAGC
GCGTATGCGGCATCCAAGCACGCGATCAAGGGCTTCACCGATTCGCTGCGCATCGAGCTCGAGGCGGACAACGTGCCGGT
GTCGGTCACGCTCGTCAAGCCCGCGGCCGTCGACACGATGTTCGTGATGCACGCGAAGAACTACATGAACGTCGAGGCGA
AGCTGCCGCCGCCGATCTACGATCCGGACATCGTCGCCGACGCGATCCTGTTCGCGGCCGAGCATGCCCGGCGCACACTG
TTCGTCGGCGGCGCGGCGAAGCTCGCGTCGTCGGGCGCGTATCACGCGCCGCGGCTGTTCGACCGGCTCGCCACGTCGCT
GTTCTCGCGCGGGTAG

Upstream 100 bases:

>100_bases
CGCCGTCGACGTGACCAGGCAGGTGGACGGCGTGAAGACCGTGCGCGACAAGCTGACGGTGCAGCCCAAGTAGCCGGCCC
GTTCGGCAAGGAGTCCAGTC

Downstream 100 bases:

>100_bases
CGCACGATGCGCCCCGCGCGGCCGCGCGACGACAACGCGCTGTACGAGCCGACGCGCCCGTTGCACGAGCGCGAAGGGAT
GGACGGCGTGGTGCTGCGCT

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MKCTLKPIGEQTIVITGATSGIGLVTARKAAKKGAKLVLVARNDTALEALCEEIRQHGGLAVAVAADVSRYEDVQRAAAK
AVETFGGFDTWINNAGVTIFGSALSVPLDDQRRLFDTNYWGVVHGSLVASEHFRRQSDFRGGAIINMGSEASDAPVPLQS
AYAASKHAIKGFTDSLRIELEADNVPVSVTLVKPAAVDTMFVMHAKNYMNVEAKLPPPIYDPDIVADAILFAAEHARRTL
FVGGAAKLASSGAYHAPRLFDRLATSLFSRG

Sequences:

>Translated_271_residues
MKCTLKPIGEQTIVITGATSGIGLVTARKAAKKGAKLVLVARNDTALEALCEEIRQHGGLAVAVAADVSRYEDVQRAAAK
AVETFGGFDTWINNAGVTIFGSALSVPLDDQRRLFDTNYWGVVHGSLVASEHFRRQSDFRGGAIINMGSEASDAPVPLQS
AYAASKHAIKGFTDSLRIELEADNVPVSVTLVKPAAVDTMFVMHAKNYMNVEAKLPPPIYDPDIVADAILFAAEHARRTL
FVGGAAKLASSGAYHAPRLFDRLATSLFSRG
>Mature_271_residues
MKCTLKPIGEQTIVITGATSGIGLVTARKAAKKGAKLVLVARNDTALEALCEEIRQHGGLAVAVAADVSRYEDVQRAAAK
AVETFGGFDTWINNAGVTIFGSALSVPLDDQRRLFDTNYWGVVHGSLVASEHFRRQSDFRGGAIINMGSEASDAPVPLQS
AYAASKHAIKGFTDSLRIELEADNVPVSVTLVKPAAVDTMFVMHAKNYMNVEAKLPPPIYDPDIVADAILFAAEHARRTL
FVGGAAKLASSGAYHAPRLFDRLATSLFSRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=201, Percent_Identity=36.318407960199, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI4503817, Length=192, Percent_Identity=31.7708333333333, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI109715829, Length=227, Percent_Identity=28.1938325991189, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI157739938, Length=193, Percent_Identity=31.6062176165803, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI7706318, Length=179, Percent_Identity=31.2849162011173, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI31542939, Length=190, Percent_Identity=32.1052631578947, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI32483357, Length=196, Percent_Identity=29.0816326530612, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI142976729, Length=246, Percent_Identity=27.6422764227642, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI4758504, Length=222, Percent_Identity=31.0810810810811, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI5031737, Length=195, Percent_Identity=29.7435897435897, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI33667109, Length=189, Percent_Identity=30.6878306878307, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI224922801, Length=166, Percent_Identity=33.7349397590361, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI83715985, Length=169, Percent_Identity=35.5029585798817, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI32455239, Length=199, Percent_Identity=30.6532663316583, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI5031765, Length=199, Percent_Identity=30.6532663316583, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI126723191, Length=183, Percent_Identity=28.4153005464481, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI4557649, Length=207, Percent_Identity=30.9178743961353, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI40254992, Length=226, Percent_Identity=27.4336283185841, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI40807363, Length=247, Percent_Identity=25.9109311740891, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI7657478, Length=195, Percent_Identity=32.3076923076923, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI210032110, Length=242, Percent_Identity=25.2066115702479, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI40548397, Length=228, Percent_Identity=29.8245614035088, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI214010158, Length=228, Percent_Identity=29.8245614035088, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI214010156, Length=228, Percent_Identity=29.8245614035088, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI22758144, Length=228, Percent_Identity=29.8245614035088, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI40254986, Length=201, Percent_Identity=26.865671641791, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1788459, Length=190, Percent_Identity=30, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI87082100, Length=171, Percent_Identity=37.4269005847953, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI2367365, Length=191, Percent_Identity=30.8900523560209, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790717, Length=178, Percent_Identity=27.5280898876405, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1786701, Length=218, Percent_Identity=25.2293577981651, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1786812, Length=237, Percent_Identity=29.535864978903, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1787820, Length=192, Percent_Identity=27.0833333333333, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71997402, Length=172, Percent_Identity=30.8139534883721, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI193203115, Length=238, Percent_Identity=29.4117647058824, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI193203117, Length=233, Percent_Identity=29.6137339055794, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17564282, Length=247, Percent_Identity=27.9352226720648, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17508895, Length=263, Percent_Identity=27.7566539923954, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17570069, Length=194, Percent_Identity=26.8041237113402, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17567345, Length=175, Percent_Identity=26.8571428571429, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17560220, Length=250, Percent_Identity=28.8, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17561402, Length=177, Percent_Identity=27.683615819209, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI71994604, Length=178, Percent_Identity=28.6516853932584, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17563726, Length=263, Percent_Identity=26.2357414448669, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI72000259, Length=254, Percent_Identity=24.4094488188976, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17538486, Length=275, Percent_Identity=26.1818181818182, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562906, Length=250, Percent_Identity=27.6, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=191, Percent_Identity=29.8429319371728, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17560332, Length=203, Percent_Identity=29.5566502463054, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17544670, Length=255, Percent_Identity=25.8823529411765, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=245, Percent_Identity=31.0204081632653, Blast_Score=89, Evalue=6e-19,
Organism=Saccharomyces cerevisiae, GI6319635, Length=194, Percent_Identity=28.8659793814433, Blast_Score=69, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24644339, Length=205, Percent_Identity=31.219512195122, Blast_Score=88, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24580925, Length=208, Percent_Identity=31.7307692307692, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21356301, Length=247, Percent_Identity=27.9352226720648, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI116007236, Length=225, Percent_Identity=32.8888888888889, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI28571526, Length=204, Percent_Identity=29.9019607843137, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21357041, Length=194, Percent_Identity=32.9896907216495, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI23397609, Length=183, Percent_Identity=31.6939890710383, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI28571387, Length=233, Percent_Identity=30.4721030042918, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24648944, Length=224, Percent_Identity=30.8035714285714, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24641388, Length=200, Percent_Identity=30, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI28574402, Length=192, Percent_Identity=30.7291666666667, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24584744, Length=192, Percent_Identity=30.7291666666667, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281364494, Length=231, Percent_Identity=30.3030303030303, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24639444, Length=246, Percent_Identity=28.4552845528455, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI116007238, Length=206, Percent_Identity=31.5533980582524, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI21358495, Length=205, Percent_Identity=26.3414634146341, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI161076933, Length=189, Percent_Identity=32.2751322751323, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24584748, Length=189, Percent_Identity=32.2751322751323, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24649181, Length=196, Percent_Identity=27.5510204081633, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24584752, Length=204, Percent_Identity=29.9019607843137, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21355631, Length=176, Percent_Identity=26.7045454545455, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI116007234, Length=227, Percent_Identity=27.7533039647577, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 28897; Mature: 28897

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MKCTLKPIGEQTIVITGATSGIGLVTARKAAKKGAKLVLVARNDTALEALCEEIRQHGGL
CCCCCCCCCCEEEEEEECCCCCCCEEHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCE
AVAVAADVSRYEDVQRAAAKAVETFGGFDTWINNAGVTIFGSALSVPLDDQRRLFDTNYW
EEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECEEECCCCCCHHEECCCCC
GVVHGSLVASEHFRRQSDFRGGAIINMGSEASDAPVPLQSAYAASKHAIKGFTDSLRIEL
EEEEHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
EADNVPVSVTLVKPAAVDTMFVMHAKNYMNVEAKLPPPIYDPDIVADAILFAAEHARRTL
EECCCCEEEEEECCCHHHHHHEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCEEE
FVGGAAKLASSGAYHAPRLFDRLATSLFSRG
EECCHHHHHCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKCTLKPIGEQTIVITGATSGIGLVTARKAAKKGAKLVLVARNDTALEALCEEIRQHGGL
CCCCCCCCCCEEEEEEECCCCCCCEEHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCE
AVAVAADVSRYEDVQRAAAKAVETFGGFDTWINNAGVTIFGSALSVPLDDQRRLFDTNYW
EEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECEEECCCCCCHHEECCCCC
GVVHGSLVASEHFRRQSDFRGGAIINMGSEASDAPVPLQSAYAASKHAIKGFTDSLRIEL
EEEEHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
EADNVPVSVTLVKPAAVDTMFVMHAKNYMNVEAKLPPPIYDPDIVADAILFAAEHARRTL
EECCCCEEEEEECCCHHHHHHEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCEEE
FVGGAAKLASSGAYHAPRLFDRLATSLFSRG
EECCHHHHHCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]