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The map label for this gene is 53723240

Identifier: 53723240

GI number: 53723240

Start: 2997308

End: 2998165

Strand: Reverse

Name: 53723240

Synonym: BPSS2223

Alternate gene names: NA

Gene position: 2998165-2997308 (Counterclockwise)

Preceding gene: 53723241

Following gene: 53723239

Centisome position: 94.49

GC content: 70.28

Gene sequence:

>858_bases
GTGCGCGACGCGGCGGCGCGCAGGCGCACCGCGCGCGGCATCGTCTGCGCGGCGTGCGCGGCGGCGGCCGTATCCGCCCA
CGCGCAGACACCATCGCCGCTCGGCGAGTGGCAGTATTCGGCCGGCGTGCCGCTCGACAAGCTCTTCAATCCGAACCCGC
AGACATGGCAGATCTCGGTCGGCGCGGCCGCGACGCTGCAGCCGCGCTACGACGGCTCGAACCAGTACCGGCCGATGGCC
GGGCCGACCTTCGACGCCCGCTATCGCGACCTGTGGTTCGTGTCGACGGGCGAGGGAATCGGCGTCAACGTGCTGCGCGG
GCCGAACTGGCGCGCGACGCTGTCGGCGGGCTATGACCTCGGCCGCCGCGAGGCCGACGACCGCGGCCATCTGACGGGCA
TCGGCAACATCAATCCGGCGGCGGTGATCAAGCTGTCGGCCGATTACGTGATCTCACACGCGTTCCCGCTTGTGCTGCGC
GCGGACGTGCGGCGCAGCGTCGGCGGCGCGAACGGCTGGGTGGCCGATCTCGCCGCCTACATGCCGCTGCCCGGCAGCTC
GGAGACGTTCTACTGGTTCGCGGGGCCGACCGTCACGTTCGCCGATTCGCGCTACATGAACAGCTGGTTCGGCGTGAACG
ACGCGCAGGCCGCGCGTTCCGGACATCCGCGTTACGCGCCGAGCGCGGGCGTGAAATCGTTCGGCGGCGGCATGACGCTC
GTGTGGTTCGTCACGAAGCACTGGTTCGTGACGGCCGACGGCGCGATCGAGCAGCTTGTCGGCAGCGCCGCGCGCAGTCC
GCTCACCCAGCGCTCGACGAACGCGGTCGTCGACGTGTCGATCAATTACCAGTTCTAG

Upstream 100 bases:

>100_bases
GCGGCTTTCGCGCGAAAACGCGCAGTACCGACTACAACGCGAACAAAGAGGACAGCACATGAGCGACGCACGAGCCGTTT
CGATCCGGGGAACCGCCGCT

Downstream 100 bases:

>100_bases
CGGCGGCGCTCGCGGGCGAGGCACGGGCGGCGGAAAGCGGCGCGGGTGCGATACGCACGCGCGAGGCCGTGGCCCGCGGC
CGGGACTGGAACTTGGATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MRDAAARRRTARGIVCAACAAAAVSAHAQTPSPLGEWQYSAGVPLDKLFNPNPQTWQISVGAAATLQPRYDGSNQYRPMA
GPTFDARYRDLWFVSTGEGIGVNVLRGPNWRATLSAGYDLGRREADDRGHLTGIGNINPAAVIKLSADYVISHAFPLVLR
ADVRRSVGGANGWVADLAAYMPLPGSSETFYWFAGPTVTFADSRYMNSWFGVNDAQAARSGHPRYAPSAGVKSFGGGMTL
VWFVTKHWFVTADGAIEQLVGSAARSPLTQRSTNAVVDVSINYQF

Sequences:

>Translated_285_residues
MRDAAARRRTARGIVCAACAAAAVSAHAQTPSPLGEWQYSAGVPLDKLFNPNPQTWQISVGAAATLQPRYDGSNQYRPMA
GPTFDARYRDLWFVSTGEGIGVNVLRGPNWRATLSAGYDLGRREADDRGHLTGIGNINPAAVIKLSADYVISHAFPLVLR
ADVRRSVGGANGWVADLAAYMPLPGSSETFYWFAGPTVTFADSRYMNSWFGVNDAQAARSGHPRYAPSAGVKSFGGGMTL
VWFVTKHWFVTADGAIEQLVGSAARSPLTQRSTNAVVDVSINYQF
>Mature_285_residues
MRDAAARRRTARGIVCAACAAAAVSAHAQTPSPLGEWQYSAGVPLDKLFNPNPQTWQISVGAAATLQPRYDGSNQYRPMA
GPTFDARYRDLWFVSTGEGIGVNVLRGPNWRATLSAGYDLGRREADDRGHLTGIGNINPAAVIKLSADYVISHAFPLVLR
ADVRRSVGGANGWVADLAAYMPLPGSSETFYWFAGPTVTFADSRYMNSWFGVNDAQAARSGHPRYAPSAGVKSFGGGMTL
VWFVTKHWFVTADGAIEQLVGSAARSPLTQRSTNAVVDVSINYQF

Specific function: Unknown

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mipA/ompV family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010583 [H]

Pfam domain/function: PF06629 MipA [H]

EC number: NA

Molecular weight: Translated: 30677; Mature: 30677

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS01070 NUCLEASE_NON_SPEC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDAAARRRTARGIVCAACAAAAVSAHAQTPSPLGEWQYSAGVPLDKLFNPNPQTWQISV
CCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEE
GAAATLQPRYDGSNQYRPMAGPTFDARYRDLWFVSTGEGIGVNVLRGPNWRATLSAGYDL
CCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEECCCCC
GRREADDRGHLTGIGNINPAAVIKLSADYVISHAFPLVLRADVRRSVGGANGWVADLAAY
CCCCCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
MPLPGSSETFYWFAGPTVTFADSRYMNSWFGVNDAQAARSGHPRYAPSAGVKSFGGGMTL
CCCCCCCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHCCCEEE
VWFVTKHWFVTADGAIEQLVGSAARSPLTQRSTNAVVDVSINYQF
EEEEEECEEEEECHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MRDAAARRRTARGIVCAACAAAAVSAHAQTPSPLGEWQYSAGVPLDKLFNPNPQTWQISV
CCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEE
GAAATLQPRYDGSNQYRPMAGPTFDARYRDLWFVSTGEGIGVNVLRGPNWRATLSAGYDL
CCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEECCCCC
GRREADDRGHLTGIGNINPAAVIKLSADYVISHAFPLVLRADVRRSVGGANGWVADLAAY
CCCCCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
MPLPGSSETFYWFAGPTVTFADSRYMNSWFGVNDAQAARSGHPRYAPSAGVKSFGGGMTL
CCCCCCCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHCCCEEE
VWFVTKHWFVTADGAIEQLVGSAARSPLTQRSTNAVVDVSINYQF
EEEEEECEEEEECHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]