| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is katE
Identifier: 53723231
GI number: 53723231
Start: 2988112
End: 2990238
Strand: Reverse
Name: katE
Synonym: BPSS2214
Alternate gene names: 53723231
Gene position: 2990238-2988112 (Counterclockwise)
Preceding gene: 53723232
Following gene: 53723230
Centisome position: 94.24
GC content: 68.88
Gene sequence:
>2127_bases ATGGCCGATTCAGACCGCAACGCTCCACACGAAACGCCGCGCGCCGCGCAGCCGGACGACGCGCGCGCGGACCGCAAATC GCAGGATCTCGAGCCGTATCGCTCGAAGCCGCAAGGCGAGGCGCTGCGCACGAACCAGGGCGTGCGCATCGCGGACGATC AGAACACGCTGCGCGCGGGCGCGCGCGGCCCGTCGCTGCTCGAAGACTTCATCATGCGCGAGAAGATCACGCATTTCGAT CACGAGCGCATTCCGGAGCGCGTCGTGCACGCGCGCGGCTCGGCCGCGCACGGCGTGTTCCGCGTCTACGAATCGATGGC CGAGTACACGAAGGCCGCGTTCCTGCAGGACCCGGCGAAGGAAACGCCCGTGTACGTGCGCTTCTCGACGGTGCAGGGCC CGCGCGGCTCCGCCGACACGGTGCGCGACGTGCGCGGCTTCGCCGTGAAGTTCTACACCGACGAGGGCAACTACGATCTC GTGGGCAACAACATGCCGGTGTTCTTCATCCAGGATGCGATCAAGTTCCCGGATTTCGTGCACGCGGTGAAGCCGGAGGC GCCCAACGAGATGCCGACGGGCGCGTCCGCGCACGATACGTTCTGGGATTTCGTGTCGCTCGTGCCGGAATCCGCGCACA TGGTCGCGTGGCTGATGTCGGACCGCGCGATTCCGCGCAGCTTCCGCACGATGGAAGGCTTCGGCGTGCATACGTTCCGG TTCGTCAATGCGCAGGGCGTCGCGCGCTTCGTGAAGCTGCACTGGCGCCCGGTGCTCGGCTCGTACTCGCTGCTGTGGGA CGAGGCGCAGAAGATCGCCGGCCACGATCCGGATTTCCACCGGCGGGATTTGTGGGAGGCGATCGAGCGCGGCGACTATC CGGAGTACGAACTCGGCGTGCAGATCATCGAGGCGCGCGACCAGCACGCGTTCGGCTTCGATCTGCTCGATCCGACCAAG CTGATTCCGGAGGAAACGGTGCCGGTGAAGCTGATCGGCAAGATGACGCTCAATCGCAATCCGGACAATTTCTTCGCGGA AACCGAGCAGGTGGCGTTTCATCCGGGGCACCTCGTGCCGGGCATCGACTTCACCGACGATCCGCTGCTGCAGGGCCGGC TCTTCTCGTACACCGACACGCAACTGAGCCGTCTCGGCGGGCCGAACTTCCACGAGCTCCCGATCAACCGGCCGGTGTGC CCGTTCGCGAATCTGCAGCGCGACGCGATGCACCGGCAGACGATCGACGTCGGGCAGGCGTCGTACGAGCCGAATTCGCT GAACGGCGGCTGGCCGAAGGAAACCGATCCCGCCGGGCGGGACGGCGGCTTCGATAGCTACCCGGAGGCGGTCGAGGGCG CGAAGGTGCGCGTGCGCAGCGGATCGTTCGCCGATCATTTCTCGCAGGCCGCGCTGTTCTATCAGAGCATGAGCGACGTC GAGCGGCGGCACATCCGCGATGCATACCGCTTCGAGCTCGGCAAGGTGACGCGGCCCGAGATTCGCGCGCGCGTCGTCGA CGAGATCCTCGCGCGCTTCGATGCGGGCCTCGCCGCGGAAGTGGCCGAGGGGCTCGGCCTGCCGCCGCCGCCCACGAGCG CGCCGGCGATCGTCGCGCAGCCGCTGTCGCCCGCGCTCAGCCTGCTCACGCGCGGCAAGCGCAGCGTGCGCTCGCGCAAG GTCGCGCTCGTCGCGACGCCGGGCGCGGACACGCGCCTCATCGAGCGCGTGCGGCGCGCGCTGACCGATGCGCGCGCGGT GCCGGTGCTCGTCGCGCCGACGCTCGCGCGGATCGGCGAACTCACGCCCGAGGCGACGCTCGCCGGCATGCCGTCGGTGA TGTTCGACGCGGTGTTCGTCTGCGGCGGCGACGGCGACGGGCGCGACCTCGTGCATTCGAGCGACGCGCGGCATTTCCTG CAGGAGGCGTTCAAGCACCTGAAGGCGATCGCCGCCGTGGGCTCCGGGCGTCAGCTGCTCGGCGCCGCGCATCTGCCGGA GCAGGGGGACGGCGTGTGCGTCGGGCACGCGGCGGATCTCGATCAGGTGGTCGCGAAGTTCTTCGATGCGTTGTCCGAGC ACCGCGTCTGGTCGCGCGAGCCGCTCGCGCAGGGCGTGCCCGCGTAG
Upstream 100 bases:
>100_bases GCCGCGTCGCGAACGGCTCGCGCGCACCCGCCGTGCGCGCGCCCACTCACGCTGCGGGCGACGCGCGCGCCGCCCGCGTC ACGAAAGGGACTCATCACCG
Downstream 100 bases:
>100_bases CACACACGGCGCGCGCAGCACGATGGACGCGGTTCTTGCCTTCTTCGCGCCGCTGTTCGGCTCGGGGGCGCCGCTCGGCG CGCCGCAGATGGCGGCGCGC
Product: hydroperoxidase II
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 708; Mature: 707
Protein sequence:
>708_residues MADSDRNAPHETPRAAQPDDARADRKSQDLEPYRSKPQGEALRTNQGVRIADDQNTLRAGARGPSLLEDFIMREKITHFD HERIPERVVHARGSAAHGVFRVYESMAEYTKAAFLQDPAKETPVYVRFSTVQGPRGSADTVRDVRGFAVKFYTDEGNYDL VGNNMPVFFIQDAIKFPDFVHAVKPEAPNEMPTGASAHDTFWDFVSLVPESAHMVAWLMSDRAIPRSFRTMEGFGVHTFR FVNAQGVARFVKLHWRPVLGSYSLLWDEAQKIAGHDPDFHRRDLWEAIERGDYPEYELGVQIIEARDQHAFGFDLLDPTK LIPEETVPVKLIGKMTLNRNPDNFFAETEQVAFHPGHLVPGIDFTDDPLLQGRLFSYTDTQLSRLGGPNFHELPINRPVC PFANLQRDAMHRQTIDVGQASYEPNSLNGGWPKETDPAGRDGGFDSYPEAVEGAKVRVRSGSFADHFSQAALFYQSMSDV ERRHIRDAYRFELGKVTRPEIRARVVDEILARFDAGLAAEVAEGLGLPPPPTSAPAIVAQPLSPALSLLTRGKRSVRSRK VALVATPGADTRLIERVRRALTDARAVPVLVAPTLARIGELTPEATLAGMPSVMFDAVFVCGGDGDGRDLVHSSDARHFL QEAFKHLKAIAAVGSGRQLLGAAHLPEQGDGVCVGHAADLDQVVAKFFDALSEHRVWSREPLAQGVPA
Sequences:
>Translated_708_residues MADSDRNAPHETPRAAQPDDARADRKSQDLEPYRSKPQGEALRTNQGVRIADDQNTLRAGARGPSLLEDFIMREKITHFD HERIPERVVHARGSAAHGVFRVYESMAEYTKAAFLQDPAKETPVYVRFSTVQGPRGSADTVRDVRGFAVKFYTDEGNYDL VGNNMPVFFIQDAIKFPDFVHAVKPEAPNEMPTGASAHDTFWDFVSLVPESAHMVAWLMSDRAIPRSFRTMEGFGVHTFR FVNAQGVARFVKLHWRPVLGSYSLLWDEAQKIAGHDPDFHRRDLWEAIERGDYPEYELGVQIIEARDQHAFGFDLLDPTK LIPEETVPVKLIGKMTLNRNPDNFFAETEQVAFHPGHLVPGIDFTDDPLLQGRLFSYTDTQLSRLGGPNFHELPINRPVC PFANLQRDAMHRQTIDVGQASYEPNSLNGGWPKETDPAGRDGGFDSYPEAVEGAKVRVRSGSFADHFSQAALFYQSMSDV ERRHIRDAYRFELGKVTRPEIRARVVDEILARFDAGLAAEVAEGLGLPPPPTSAPAIVAQPLSPALSLLTRGKRSVRSRK VALVATPGADTRLIERVRRALTDARAVPVLVAPTLARIGELTPEATLAGMPSVMFDAVFVCGGDGDGRDLVHSSDARHFL QEAFKHLKAIAAVGSGRQLLGAAHLPEQGDGVCVGHAADLDQVVAKFFDALSEHRVWSREPLAQGVPA >Mature_707_residues ADSDRNAPHETPRAAQPDDARADRKSQDLEPYRSKPQGEALRTNQGVRIADDQNTLRAGARGPSLLEDFIMREKITHFDH ERIPERVVHARGSAAHGVFRVYESMAEYTKAAFLQDPAKETPVYVRFSTVQGPRGSADTVRDVRGFAVKFYTDEGNYDLV GNNMPVFFIQDAIKFPDFVHAVKPEAPNEMPTGASAHDTFWDFVSLVPESAHMVAWLMSDRAIPRSFRTMEGFGVHTFRF VNAQGVARFVKLHWRPVLGSYSLLWDEAQKIAGHDPDFHRRDLWEAIERGDYPEYELGVQIIEARDQHAFGFDLLDPTKL IPEETVPVKLIGKMTLNRNPDNFFAETEQVAFHPGHLVPGIDFTDDPLLQGRLFSYTDTQLSRLGGPNFHELPINRPVCP FANLQRDAMHRQTIDVGQASYEPNSLNGGWPKETDPAGRDGGFDSYPEAVEGAKVRVRSGSFADHFSQAALFYQSMSDVE RRHIRDAYRFELGKVTRPEIRARVVDEILARFDAGLAAEVAEGLGLPPPPTSAPAIVAQPLSPALSLLTRGKRSVRSRKV ALVATPGADTRLIERVRRALTDARAVPVLVAPTLARIGELTPEATLAGMPSVMFDAVFVCGGDGDGRDLVHSSDARHFLQ EAFKHLKAIAAVGSGRQLLGAAHLPEQGDGVCVGHAADLDQVVAKFFDALSEHRVWSREPLAQGVPA
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family. HPII subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=497, Percent_Identity=40.8450704225352, Blast_Score=358, Evalue=7e-99, Organism=Escherichia coli, GI48994891, Length=732, Percent_Identity=56.6939890710383, Blast_Score=799, Evalue=0.0, Organism=Caenorhabditis elegans, GI71998444, Length=467, Percent_Identity=42.1841541755889, Blast_Score=362, Evalue=1e-100, Organism=Caenorhabditis elegans, GI25147792, Length=510, Percent_Identity=40.5882352941176, Blast_Score=362, Evalue=1e-100, Organism=Caenorhabditis elegans, GI25151141, Length=504, Percent_Identity=41.2698412698413, Blast_Score=361, Evalue=1e-100, Organism=Saccharomyces cerevisiae, GI6320462, Length=476, Percent_Identity=38.2352941176471, Blast_Score=303, Evalue=9e-83, Organism=Saccharomyces cerevisiae, GI6321525, Length=345, Percent_Identity=40.8695652173913, Blast_Score=275, Evalue=2e-74, Organism=Drosophila melanogaster, GI17981717, Length=446, Percent_Identity=43.0493273542601, Blast_Score=342, Evalue=5e-94, Organism=Drosophila melanogaster, GI19920968, Length=463, Percent_Identity=38.8768898488121, Blast_Score=323, Evalue=2e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 78333; Mature: 78202
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSDRNAPHETPRAAQPDDARADRKSQDLEPYRSKPQGEALRTNQGVRIADDQNTLRAG CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHCCCCCCHHHCCCCEEEECCCHHHHCC ARGPSLLEDFIMREKITHFDHERIPERVVHARGSAAHGVFRVYESMAEYTKAAFLQDPAK CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC ETPVYVRFSTVQGPRGSADTVRDVRGFAVKFYTDEGNYDLVGNNMPVFFIQDAIKFPDFV CCCEEEEEEECCCCCCCHHHHHHHCCEEEEEEECCCCEEEECCCCCEEEECCHHCCCHHH HAVKPEAPNEMPTGASAHDTFWDFVSLVPESAHMVAWLMSDRAIPRSFRTMEGFGVHTFR HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCCCEEEE FVNAQGVARFVKLHWRPVLGSYSLLWDEAQKIAGHDPDFHRRDLWEAIERGDYPEYELGV EECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHH QIIEARDQHAFGFDLLDPTKLIPEETVPVKLIGKMTLNRNPDNFFAETEQVAFHPGHLVP HHEECCCCCCCCCCCCCCHHHCCCCCCCEEEEEEEECCCCCCHHHHCCHHHEECCCCCCC GIDFTDDPLLQGRLFSYTDTQLSRLGGPNFHELPINRPVCPFANLQRDAMHRQTIDVGQA CCCCCCCCHHCCEEECCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC SYEPNSLNGGWPKETDPAGRDGGFDSYPEAVEGAKVRVRSGSFADHFSQAALFYQSMSDV CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH ERRHIRDAYRFELGKVTRPEIRARVVDEILARFDAGLAAEVAEGLGLPPPPTSAPAIVAQ HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCEEEC PLSPALSLLTRGKRSVRSRKVALVATPGADTRLIERVRRALTDARAVPVLVAPTLARIGE CHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHC LTPEATLAGMPSVMFDAVFVCGGDGDGRDLVHSSDARHFLQEAFKHLKAIAAVGSGRQLL CCCCHHHCCCCHHHHCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH GAAHLPEQGDGVCVGHAADLDQVVAKFFDALSEHRVWSREPLAQGVPA HHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCC >Mature Secondary Structure ADSDRNAPHETPRAAQPDDARADRKSQDLEPYRSKPQGEALRTNQGVRIADDQNTLRAG CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHCCCCCCHHHCCCCEEEECCCHHHHCC ARGPSLLEDFIMREKITHFDHERIPERVVHARGSAAHGVFRVYESMAEYTKAAFLQDPAK CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC ETPVYVRFSTVQGPRGSADTVRDVRGFAVKFYTDEGNYDLVGNNMPVFFIQDAIKFPDFV CCCEEEEEEECCCCCCCHHHHHHHCCEEEEEEECCCCEEEECCCCCEEEECCHHCCCHHH HAVKPEAPNEMPTGASAHDTFWDFVSLVPESAHMVAWLMSDRAIPRSFRTMEGFGVHTFR HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCCCEEEE FVNAQGVARFVKLHWRPVLGSYSLLWDEAQKIAGHDPDFHRRDLWEAIERGDYPEYELGV EECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHH QIIEARDQHAFGFDLLDPTKLIPEETVPVKLIGKMTLNRNPDNFFAETEQVAFHPGHLVP HHEECCCCCCCCCCCCCCHHHCCCCCCCEEEEEEEECCCCCCHHHHCCHHHEECCCCCCC GIDFTDDPLLQGRLFSYTDTQLSRLGGPNFHELPINRPVCPFANLQRDAMHRQTIDVGQA CCCCCCCCHHCCEEECCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC SYEPNSLNGGWPKETDPAGRDGGFDSYPEAVEGAKVRVRSGSFADHFSQAALFYQSMSDV CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH ERRHIRDAYRFELGKVTRPEIRARVVDEILARFDAGLAAEVAEGLGLPPPPTSAPAIVAQ HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCEEEC PLSPALSLLTRGKRSVRSRKVALVATPGADTRLIERVRRALTDARAVPVLVAPTLARIGE CHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHC LTPEATLAGMPSVMFDAVFVCGGDGDGRDLVHSSDARHFLQEAFKHLKAIAAVGSGRQLL CCCCHHHCCCCHHHHCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH GAAHLPEQGDGVCVGHAADLDQVVAKFFDALSEHRVWSREPLAQGVPA HHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA