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The map label for this gene is 53723229

Identifier: 53723229

GI number: 53723229

Start: 2986398

End: 2987504

Strand: Reverse

Name: 53723229

Synonym: BPSS2212

Alternate gene names: NA

Gene position: 2987504-2986398 (Counterclockwise)

Preceding gene: 53723230

Following gene: 53723228

Centisome position: 94.15

GC content: 70.73

Gene sequence:

>1107_bases
ATGGCGCGCATGATCTGGAAAGGCGCGATCAGCTTCGGGCTCGTGCACGTGCCGGTGCAGCTGTATCCGGCCACGCGCAC
CGTGAAGCCTTCGTTTCGCCTGCTCGACAAGCGTTCGCTCGATCCGGTCGGCTATCGGCAGATCAACAAGCGAACCGGCA
AGGCCGTGCCGCGCGAGGACATCGTGCGCGGCTACGAGTACGAGAAGGAACGTTACGTGATCCTGACCGACGAGGAGATT
CGCGCGGCGAATCCGGAATCGACGCAGACGGTCGACATCCTGACGTTCGTCGACGATGAGGCGGTGTCGTTCCTCTATCT
CGACACGCCGTACTACCTCGTGCCCGATCGCGGCGGCGAGAAGGTCTACGCGCTGCTGCGCGACGCGCTGAAGCGCTCGG
GCAAGATCGGCATCGCGCTCGTCGTGATGCGCGACCGGCAGCATCTGGGCGCGGTGATTCCGGTCGGGCCGCTGCTCGCG
CTCGACACGCTGCGCTGGCAGGATGAACTGCGGCCGCTCGCGGAGATCGACGCGCCCGCCGCCGACGCGAAGAAGGCGGG
CGTGAGCGCGCGCGAGTTCGAGATGGCGGCGAAGCTGATCGACGATATGTCCGGCGACTGGTCGCCCGACGATTATCACG
ACACGTTCCGCGACGACATCCTCGCGCTCGTCGACAGGAAGGTGCGCGAAGGGCGGGTCGAGGAAATTGCGCAGGAGGAC
ACGGCGCCGGCGCGGCGCACCGCGGACATCGTCGATCTGACCGAGCTGCTCAAGCGCAGCCTCGGCCGCGCGAAGGGGCC
GAGGCGCGCACCGGACGGCGGCGCGAACGAACGCGGCGACAGCGGCGAAGGCGGCGACAGCGGCGAAGGCGGCGGACGAG
GCGGCGGCGAACTCGCGCGCGAGCTCGAGCGAAGCGTCGGCGGAACGCGCGGCGGGCGTGGCGGCGGCCGCAAGAAGGCC
GAGCCGCATGCGCCGCCGCGCAAGCGCGCGCAGGCGGCCGCGACGAAGCGGGGGAAACAGGCGAAGCCGCGCGACGGCGC
GTCGCGCGCGTCGGCGCGCACGGCCGCGAAGAAGCCCGCCGCCGCGCGCAAGCGGCGCGCCGCCTGA

Upstream 100 bases:

>100_bases
CATTCGTCGGAAGTCCTGAGCGGGCGGCGGCGCGGCGCCGCCCGCGGCTCGCGCGGGCGCGGATGCGAACGCGGGGGCGA
ACGGCGCAACAGGAGGCGCG

Downstream 100 bases:

>100_bases
CGTGGCAGGTTCGCGTGCGCGGCGCGCGCGGCCTGCGCGGCGGCGATCGACGGATCGGGAGGCAACCGGATGGCGGGAAA
ACTCAGCGTGTACCGCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MARMIWKGAISFGLVHVPVQLYPATRTVKPSFRLLDKRSLDPVGYRQINKRTGKAVPREDIVRGYEYEKERYVILTDEEI
RAANPESTQTVDILTFVDDEAVSFLYLDTPYYLVPDRGGEKVYALLRDALKRSGKIGIALVVMRDRQHLGAVIPVGPLLA
LDTLRWQDELRPLAEIDAPAADAKKAGVSAREFEMAAKLIDDMSGDWSPDDYHDTFRDDILALVDRKVREGRVEEIAQED
TAPARRTADIVDLTELLKRSLGRAKGPRRAPDGGANERGDSGEGGDSGEGGGRGGGELARELERSVGGTRGGRGGGRKKA
EPHAPPRKRAQAAATKRGKQAKPRDGASRASARTAAKKPAAARKRRAA

Sequences:

>Translated_368_residues
MARMIWKGAISFGLVHVPVQLYPATRTVKPSFRLLDKRSLDPVGYRQINKRTGKAVPREDIVRGYEYEKERYVILTDEEI
RAANPESTQTVDILTFVDDEAVSFLYLDTPYYLVPDRGGEKVYALLRDALKRSGKIGIALVVMRDRQHLGAVIPVGPLLA
LDTLRWQDELRPLAEIDAPAADAKKAGVSAREFEMAAKLIDDMSGDWSPDDYHDTFRDDILALVDRKVREGRVEEIAQED
TAPARRTADIVDLTELLKRSLGRAKGPRRAPDGGANERGDSGEGGDSGEGGGRGGGELARELERSVGGTRGGRGGGRKKA
EPHAPPRKRAQAAATKRGKQAKPRDGASRASARTAAKKPAAARKRRAA
>Mature_367_residues
ARMIWKGAISFGLVHVPVQLYPATRTVKPSFRLLDKRSLDPVGYRQINKRTGKAVPREDIVRGYEYEKERYVILTDEEIR
AANPESTQTVDILTFVDDEAVSFLYLDTPYYLVPDRGGEKVYALLRDALKRSGKIGIALVVMRDRQHLGAVIPVGPLLAL
DTLRWQDELRPLAEIDAPAADAKKAGVSAREFEMAAKLIDDMSGDWSPDDYHDTFRDDILALVDRKVREGRVEEIAQEDT
APARRTADIVDLTELLKRSLGRAKGPRRAPDGGANERGDSGEGGDSGEGGGRGGGELARELERSVGGTRGGRGGGRKKAE
PHAPPRKRAQAAATKRGKQAKPRDGASRASARTAAKKPAAARKRRAA

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 40252; Mature: 40121

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARMIWKGAISFGLVHVPVQLYPATRTVKPSFRLLDKRSLDPVGYRQINKRTGKAVPRED
CCCHHHHHHHHHCEEEEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHH
IVRGYEYEKERYVILTDEEIRAANPESTQTVDILTFVDDEAVSFLYLDTPYYLVPDRGGE
HHCCCCCCCCCEEEEECCHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEECCCCCH
KVYALLRDALKRSGKIGIALVVMRDRQHLGAVIPVGPLLALDTLRWQDELRPLAEIDAPA
HHHHHHHHHHHHCCCCEEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCC
ADAKKAGVSAREFEMAAKLIDDMSGDWSPDDYHDTFRDDILALVDRKVREGRVEEIAQED
CHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TAPARRTADIVDLTELLKRSLGRAKGPRRAPDGGANERGDSGEGGDSGEGGGRGGGELAR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
ELERSVGGTRGGRGGGRKKAEPHAPPRKRAQAAATKRGKQAKPRDGASRASARTAAKKPA
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCH
AARKRRAA
HHHHHCCC
>Mature Secondary Structure 
ARMIWKGAISFGLVHVPVQLYPATRTVKPSFRLLDKRSLDPVGYRQINKRTGKAVPRED
CCHHHHHHHHHCEEEEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHH
IVRGYEYEKERYVILTDEEIRAANPESTQTVDILTFVDDEAVSFLYLDTPYYLVPDRGGE
HHCCCCCCCCCEEEEECCHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEECCCCCH
KVYALLRDALKRSGKIGIALVVMRDRQHLGAVIPVGPLLALDTLRWQDELRPLAEIDAPA
HHHHHHHHHHHHCCCCEEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCC
ADAKKAGVSAREFEMAAKLIDDMSGDWSPDDYHDTFRDDILALVDRKVREGRVEEIAQED
CHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TAPARRTADIVDLTELLKRSLGRAKGPRRAPDGGANERGDSGEGGDSGEGGGRGGGELAR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
ELERSVGGTRGGRGGGRKKAEPHAPPRKRAQAAATKRGKQAKPRDGASRASARTAAKKPA
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCH
AARKRRAA
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]