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The map label for this gene is yieP [H]

Identifier: 53723221

GI number: 53723221

Start: 2972031

End: 2972798

Strand: Reverse

Name: yieP [H]

Synonym: BPSS2204

Alternate gene names: 53723221

Gene position: 2972798-2972031 (Counterclockwise)

Preceding gene: 53723222

Following gene: 53723216

Centisome position: 93.69

GC content: 72.27

Gene sequence:

>768_bases
ATGAACTCCTTAGATAGCAACCATCTCCTGAATCCGGCGCGCGCGCCGGCAAGACCGCTCGGCGATGCGGCCGAGCGCCG
CTCGCTGAAGGCGTCCCCGCGCGTGCAGCGCGTGCTCGACGAGCTCGTCACGCGCATCGTCGACGGCGAATACACGTCCG
GCCTGCTGCCGCCGCAGGACGTGCTCGCGCGCGAGCTCGGCGTGCCGCGCTCGGTGATGCGCGAGGTCACGCGCATGTTG
ACCGCGCGGCGGATGCTGCACGCGCGCACGAAAGCGGGCACGCGCCTCACGCCGCGCAGCGAATGGCGGCTCTTCGACGA
TCACGTGATGCAGTGGCGGATGCGCATCGCGTCGGACACGGATTTCCTGCTCGACGTCGCCGCGATGTGCGACCTGATCG
AGCCGGAGGCGGCCGCGCAGGTGGCCCTGCATTCGGACGACACGCAGCGCCGCGCGGTGCGCGCCGCGCACGCGGCGCTG
CGCGACGCGCTCGAGCCCGACGCGCTGCGCCGCGCGCTCGAGCTGCTGCATGCGTCGATCGTCGAGGCGAGCCGCAATCA
GTTCATCCGGCAGATGGCCGAAGTCGCCCGCGCGGGCGTGATGGCGATCGATCTCGACGCGGCGACGCTGCAGGAGCGCA
ACGAAGCGATCCGCGACGCGGCGGCCAAGCTCGTCGCGGCGATCGACGGCCGCGACGCGGACGGCGCGCGCACCGCGATG
ATCGCGCTGCGCGCGGCCGTCAACGAGACGAGCCTCGATCCGGCCTGA

Upstream 100 bases:

>100_bases
GATCCCGCTTTCGCATGCCGTCGTCGCGTTGCGGATGCGTTCACGTCGTCGCGCCTTCCGTTCTCAGCGAAGGATCCCAT
TGCGCACATGGATGAGTACG

Downstream 100 bases:

>100_bases
CCGCGCGGCGGGCCGCGCTGCCCGATGCGCGGCCGCGGCCGGCGGCGCGCATCGCGCGAACGCGCGGCGCCGTGCGTCAA
CGCGGCTGCGATTCGGCCCG

Product: GntR family regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MNSLDSNHLLNPARAPARPLGDAAERRSLKASPRVQRVLDELVTRIVDGEYTSGLLPPQDVLARELGVPRSVMREVTRML
TARRMLHARTKAGTRLTPRSEWRLFDDHVMQWRMRIASDTDFLLDVAAMCDLIEPEAAAQVALHSDDTQRRAVRAAHAAL
RDALEPDALRRALELLHASIVEASRNQFIRQMAEVARAGVMAIDLDAATLQERNEAIRDAAAKLVAAIDGRDADGARTAM
IALRAAVNETSLDPA

Sequences:

>Translated_255_residues
MNSLDSNHLLNPARAPARPLGDAAERRSLKASPRVQRVLDELVTRIVDGEYTSGLLPPQDVLARELGVPRSVMREVTRML
TARRMLHARTKAGTRLTPRSEWRLFDDHVMQWRMRIASDTDFLLDVAAMCDLIEPEAAAQVALHSDDTQRRAVRAAHAAL
RDALEPDALRRALELLHASIVEASRNQFIRQMAEVARAGVMAIDLDAATLQERNEAIRDAAAKLVAAIDGRDADGARTAM
IALRAAVNETSLDPA
>Mature_255_residues
MNSLDSNHLLNPARAPARPLGDAAERRSLKASPRVQRVLDELVTRIVDGEYTSGLLPPQDVLARELGVPRSVMREVTRML
TARRMLHARTKAGTRLTPRSEWRLFDDHVMQWRMRIASDTDFLLDVAAMCDLIEPEAAAQVALHSDDTQRRAVRAAHAAL
RDALEPDALRRALELLHASIVEASRNQFIRQMAEVARAGVMAIDLDAATLQERNEAIRDAAAKLVAAIDGRDADGARTAM
IALRAAVNETSLDPA

Specific function: Repressor For The Dgorkat Operon. Binds D-Galactonate As An Inducer. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=229, Percent_Identity=29.2576419213974, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI48994955, Length=164, Percent_Identity=26.219512195122, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 28101; Mature: 28101

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLDSNHLLNPARAPARPLGDAAERRSLKASPRVQRVLDELVTRIVDGEYTSGLLPPQD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH
VLARELGVPRSVMREVTRMLTARRMLHARTKAGTRLTPRSEWRLFDDHVMQWRMRIASDT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCH
DFLLDVAAMCDLIEPEAAAQVALHSDDTQRRAVRAAHAALRDALEPDALRRALELLHASI
HHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VEASRNQFIRQMAEVARAGVMAIDLDAATLQERNEAIRDAAAKLVAAIDGRDADGARTAM
HHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IALRAAVNETSLDPA
HHHHHHHCCCCCCCC
>Mature Secondary Structure
MNSLDSNHLLNPARAPARPLGDAAERRSLKASPRVQRVLDELVTRIVDGEYTSGLLPPQD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH
VLARELGVPRSVMREVTRMLTARRMLHARTKAGTRLTPRSEWRLFDDHVMQWRMRIASDT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCH
DFLLDVAAMCDLIEPEAAAQVALHSDDTQRRAVRAAHAALRDALEPDALRRALELLHASI
HHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VEASRNQFIRQMAEVARAGVMAIDLDAATLQERNEAIRDAAAKLVAAIDGRDADGARTAM
HHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
IALRAAVNETSLDPA
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]