| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53723124
Identifier: 53723124
GI number: 53723124
Start: 2857037
End: 2858941
Strand: Reverse
Name: 53723124
Synonym: BPSS2110
Alternate gene names: NA
Gene position: 2858941-2857037 (Counterclockwise)
Preceding gene: 53723127
Following gene: 53723121
Centisome position: 90.1
GC content: 71.76
Gene sequence:
>1905_bases ATGTCCGTTTTGATCCGATTGTCTTGCGCCGCGTGCGCGAGCCTTTTCATCGCCGCCGCGGGCGCGTCGCCGCTCGATGC CGATTCCGCCGACGCCGACGCCGACGCCGCGCCCGCGGCGGTCGTGAGCGACGTCCACGTGTTCGTCGTCCAGCGCGACG GCTCCGTCGACGAGCATGACGATTCGACGTTGCGCGCGAACACCGCGAGCGGCATCGATGACGTCGCGCAGCGCTACGTA TGGTTCAACAAGGACATCGATCGCGTCGAGCTGCTGCGCGCCGAGACGATCGATCGCGCGGGCGTCGCGCATCCGGTGGG CCCCGAGGCGATTCGCGACGTGCAGGAGCCGCGCTCGGCCGGCGCGCCGTTCTTCGAGGACGGCGTGCTGCGCTCGGTGA TCTTTCCGGGCGTCGACGCCGGCGCGCGCACGCGCCTCGTGTTCCGTAAATCGCGCACGAAGCCGCGCGATCCCGGCTAT TTCGGCTACTTCGCCGCGCCGTCGCGCATGCCCGTCGAAGCGCAGCGCCTGATCTTCGATCTGCCCGCCGACATGCCGCT CTACGCGGACGCGCGCGGCTACGTCGCGCGCGCGCCCGTGACGGAGAACGGCCGCACGCGCTACGCATTCGATTATCGGC ACGGCCCGTATCCGCGCATCGAGGAGGGCTCGGTCGGCTACACGACGTACGGCGACCGGCTGATGGTATCGACGCTGCGC GATTTCGCGGCGTTCGCCGGGCGGTATCGCGCGGCGGCCGCCGACGCGAGCGCGGCCGATCCCGCCGTCGCGCGGCTCGC GCAAGCGATCGTCGCGAATGCGGACGCGGCCGGGCCGCGTGCGAAGGCGCGGGCGATCTACGACTGGGTGCGCACCCACG TGCGTTATGTCGCGCTCTTTCTCGGCGAGACCGCGGCCGCGCCGCACAAGGTGACGGACATCCTGCGCAACCGCTACGGC GACTGCAAGGATCACGTCGCGCTGTTCGGCGCGCTGCTCGCGGCGGCCGGCATACGCAGCGAGCCGGCACTGCTGAATCT CGGCGCCGTCTATACGCTGCCGGACGTGCCGGGCTACGGCGGCGGCGCGATCAGCCATGCGATCACGTGGCTGCCGGACC TCGGGCTGTTCGCCGATACGACGGTGGGCGGCGTCGAGTTCGGCTATCTGCCTCCCGTCGTGATGGATCGGCCCGTGCTC CTCGTCGACGACGGCGTGCTGTCGCGCACGCCCGCCGCGCAGCCGCGCACGCGCGACGCGCGCCTGCGGATCGATGTCGC GCCGGATGGCGACGCGCGCTATCAGTATCACGTCGAGGACGGCGGCTGGCCCGCAGAGTTCGAGCGCGGCGCGTTCCGGC AGGCCGCGCGCGAGCGCGTGCGGCAACTCGCGACCGATCGGCTGCGCCAGAGCGGCTTGCGCGGCACCGCGCGGCTCGGC ACGAGCGAGCGCGACGTGACGGGCGGGCCGTTCTCGACTTCGATGACGGGTGCCCTCGAACGCTTCGCCTGGCCCGACGG CACGACCGCGCTGCCGGCGCTGTCGAGCCTCGCGGGCGGCATCGCGACGCAGGTGCAGGGCTGGCTCGCGGAGCCCGTGC GCACGCAGCCGTGGCTGTGCATCGGCGCAGACTTCGACGAGACCGCGCAGATCGCGCTGCCCGAGAACCTGCGCGTGACC GATCTGCCCGCCGACGCGGGCGTGCACGATCGCTTCTTCGATTACGAATCGCATTACGTGTTCGACGCGCCGGCGCGTGT CGTGCAGATCACGCGGCGCTTGCGCGCGCGCTTCGCGCACCAAGTGTGCGCGCCGGAGGATTTCGCGGCGGCGCGCGCAT CGCTCGAACACATCGAGCGCGACGCGCTCGCCCAGATCGTCGTGCGGGCGAAGCCGCGCGACTGA
Upstream 100 bases:
>100_bases GCGGCCGACACTGGCTCGACCGACGCGCGCGGACATCGCCGCCGCGCGCCCGGCGCGTTCCGAAGCCCCCTTCGCCTTCC ATTCGCGCAGAGCCGTTGCG
Downstream 100 bases:
>100_bases ACGGTTCGCGGTCCTTCGGAATCCACATCGTCCGAATCGGGCTCACCGGCGGCAGCGTCCGCGATAGCTCTCGACTTCCG CGTCGTAGGCGCTGAGGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 634; Mature: 633
Protein sequence:
>634_residues MSVLIRLSCAACASLFIAAAGASPLDADSADADADAAPAAVVSDVHVFVVQRDGSVDEHDDSTLRANTASGIDDVAQRYV WFNKDIDRVELLRAETIDRAGVAHPVGPEAIRDVQEPRSAGAPFFEDGVLRSVIFPGVDAGARTRLVFRKSRTKPRDPGY FGYFAAPSRMPVEAQRLIFDLPADMPLYADARGYVARAPVTENGRTRYAFDYRHGPYPRIEEGSVGYTTYGDRLMVSTLR DFAAFAGRYRAAAADASAADPAVARLAQAIVANADAAGPRAKARAIYDWVRTHVRYVALFLGETAAAPHKVTDILRNRYG DCKDHVALFGALLAAAGIRSEPALLNLGAVYTLPDVPGYGGGAISHAITWLPDLGLFADTTVGGVEFGYLPPVVMDRPVL LVDDGVLSRTPAAQPRTRDARLRIDVAPDGDARYQYHVEDGGWPAEFERGAFRQAARERVRQLATDRLRQSGLRGTARLG TSERDVTGGPFSTSMTGALERFAWPDGTTALPALSSLAGGIATQVQGWLAEPVRTQPWLCIGADFDETAQIALPENLRVT DLPADAGVHDRFFDYESHYVFDAPARVVQITRRLRARFAHQVCAPEDFAAARASLEHIERDALAQIVVRAKPRD
Sequences:
>Translated_634_residues MSVLIRLSCAACASLFIAAAGASPLDADSADADADAAPAAVVSDVHVFVVQRDGSVDEHDDSTLRANTASGIDDVAQRYV WFNKDIDRVELLRAETIDRAGVAHPVGPEAIRDVQEPRSAGAPFFEDGVLRSVIFPGVDAGARTRLVFRKSRTKPRDPGY FGYFAAPSRMPVEAQRLIFDLPADMPLYADARGYVARAPVTENGRTRYAFDYRHGPYPRIEEGSVGYTTYGDRLMVSTLR DFAAFAGRYRAAAADASAADPAVARLAQAIVANADAAGPRAKARAIYDWVRTHVRYVALFLGETAAAPHKVTDILRNRYG DCKDHVALFGALLAAAGIRSEPALLNLGAVYTLPDVPGYGGGAISHAITWLPDLGLFADTTVGGVEFGYLPPVVMDRPVL LVDDGVLSRTPAAQPRTRDARLRIDVAPDGDARYQYHVEDGGWPAEFERGAFRQAARERVRQLATDRLRQSGLRGTARLG TSERDVTGGPFSTSMTGALERFAWPDGTTALPALSSLAGGIATQVQGWLAEPVRTQPWLCIGADFDETAQIALPENLRVT DLPADAGVHDRFFDYESHYVFDAPARVVQITRRLRARFAHQVCAPEDFAAARASLEHIERDALAQIVVRAKPRD >Mature_633_residues SVLIRLSCAACASLFIAAAGASPLDADSADADADAAPAAVVSDVHVFVVQRDGSVDEHDDSTLRANTASGIDDVAQRYVW FNKDIDRVELLRAETIDRAGVAHPVGPEAIRDVQEPRSAGAPFFEDGVLRSVIFPGVDAGARTRLVFRKSRTKPRDPGYF GYFAAPSRMPVEAQRLIFDLPADMPLYADARGYVARAPVTENGRTRYAFDYRHGPYPRIEEGSVGYTTYGDRLMVSTLRD FAAFAGRYRAAAADASAADPAVARLAQAIVANADAAGPRAKARAIYDWVRTHVRYVALFLGETAAAPHKVTDILRNRYGD CKDHVALFGALLAAAGIRSEPALLNLGAVYTLPDVPGYGGGAISHAITWLPDLGLFADTTVGGVEFGYLPPVVMDRPVLL VDDGVLSRTPAAQPRTRDARLRIDVAPDGDARYQYHVEDGGWPAEFERGAFRQAARERVRQLATDRLRQSGLRGTARLGT SERDVTGGPFSTSMTGALERFAWPDGTTALPALSSLAGGIATQVQGWLAEPVRTQPWLCIGADFDETAQIALPENLRVTD LPADAGVHDRFFDYESHYVFDAPARVVQITRRLRARFAHQVCAPEDFAAARASLEHIERDALAQIVVRAKPRD
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68655; Mature: 68524
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00210 HEMOCYANIN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLIRLSCAACASLFIAAAGASPLDADSADADADAAPAAVVSDVHVFVVQRDGSVDEHD CCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEEECCCCCCCC DSTLRANTASGIDDVAQRYVWFNKDIDRVELLRAETIDRAGVAHPVGPEAIRDVQEPRSA CCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC GAPFFEDGVLRSVIFPGVDAGARTRLVFRKSRTKPRDPGYFGYFAAPSRMPVEAQRLIFD CCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHEE LPADMPLYADARGYVARAPVTENGRTRYAFDYRHGPYPRIEEGSVGYTTYGDRLMVSTLR CCCCCCCEECCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCHHHHHHHH DFAAFAGRYRAAAADASAADPAVARLAQAIVANADAAGPRAKARAIYDWVRTHVRYVALF HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LGETAAAPHKVTDILRNRYGDCKDHVALFGALLAAAGIRSEPALLNLGAVYTLPDVPGYG HCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCEEECCCCCCCC GGAISHAITWLPDLGLFADTTVGGVEFGYLPPVVMDRPVLLVDDGVLSRTPAAQPRTRDA CHHHHHHHHHCCCCCCHHCCCCCCEECCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCC RLRIDVAPDGDARYQYHVEDGGWPAEFERGAFRQAARERVRQLATDRLRQSGLRGTARLG EEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC TSERDVTGGPFSTSMTGALERFAWPDGTTALPALSSLAGGIATQVQGWLAEPVRTQPWLC CCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE IGADFDETAQIALPENLRVTDLPADAGVHDRFFDYESHYVFDAPARVVQITRRLRARFAH EECCCCCCCEEECCCCCEEEECCCCCCCCHHHCCCCCCEEECCHHHHHHHHHHHHHHHHH QVCAPEDFAAARASLEHIERDALAQIVVRAKPRD HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SVLIRLSCAACASLFIAAAGASPLDADSADADADAAPAAVVSDVHVFVVQRDGSVDEHD CEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEEECCCCCCCC DSTLRANTASGIDDVAQRYVWFNKDIDRVELLRAETIDRAGVAHPVGPEAIRDVQEPRSA CCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC GAPFFEDGVLRSVIFPGVDAGARTRLVFRKSRTKPRDPGYFGYFAAPSRMPVEAQRLIFD CCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHEE LPADMPLYADARGYVARAPVTENGRTRYAFDYRHGPYPRIEEGSVGYTTYGDRLMVSTLR CCCCCCCEECCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCCHHHHHHHH DFAAFAGRYRAAAADASAADPAVARLAQAIVANADAAGPRAKARAIYDWVRTHVRYVALF HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LGETAAAPHKVTDILRNRYGDCKDHVALFGALLAAAGIRSEPALLNLGAVYTLPDVPGYG HCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCEEECCCCCCCC GGAISHAITWLPDLGLFADTTVGGVEFGYLPPVVMDRPVLLVDDGVLSRTPAAQPRTRDA CHHHHHHHHHCCCCCCHHCCCCCCEECCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCC RLRIDVAPDGDARYQYHVEDGGWPAEFERGAFRQAARERVRQLATDRLRQSGLRGTARLG EEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC TSERDVTGGPFSTSMTGALERFAWPDGTTALPALSSLAGGIATQVQGWLAEPVRTQPWLC CCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE IGADFDETAQIALPENLRVTDLPADAGVHDRFFDYESHYVFDAPARVVQITRRLRARFAH EECCCCCCCEEECCCCCEEEECCCCCCCCHHHCCCCCCEEECCHHHHHHHHHHHHHHHHH QVCAPEDFAAARASLEHIERDALAQIVVRAKPRD HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA