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The map label for this gene is hcp1 [H]

Identifier: 53723112

GI number: 53723112

Start: 2839991

End: 2840482

Strand: Reverse

Name: hcp1 [H]

Synonym: BPSS2098

Alternate gene names: 53723112

Gene position: 2840482-2839991 (Counterclockwise)

Preceding gene: 53723113

Following gene: 53723111

Centisome position: 89.52

GC content: 64.84

Gene sequence:

>492_bases
ATGGGCGTCGCAATGTTTATGAAAGTGGACGGCGTCACCGGCGAATCGGCCGACGCGCAGCACAAGGGCTGGACCGACAT
CCAGTCGTTCTCATGGGGCGCGAGCCAGCCGGGCGCGATGGCGAGCGGCAGCGGCGGCAACGCGGGCAAGGCGAGCTTCA
ACGATCTCGTCGTCGCCGCGTACATGGACAAGGGCGCAACGGCGATCATCAAGAACTGCGCGAGCGGCAAGCACCTGCCG
ACGGTCGAGATATCGGCGTGCAAGACGGGCGGCTCGCAGATCGAGTTCATGCGCGTGACGCTGCAGGAAGTGCTCGTCAC
GTCCGCGCAGATCGCGGGCGTGGACCCGGGCGACGCGGCCGACCGGCTGATGATGCAGTACGGTTTTCAGGCCGCGAAGG
TCAAGAAGCAGTACTGGCAGCAGAACGACAACGGCGGCAAGGGCGCCGAAGTGTCGGTCGGCTGGAACATCAAGGAGAAC
ACCGAGATGTGA

Upstream 100 bases:

>100_bases
TCATCTCGAAGCTGCCGTCGGCGAAGGCGGCGGGCGAATGAGCGGCAAACGCTCGGGATTGGACTGACACATTCCGCAAT
CAACCACAACGGAGACAACG

Downstream 100 bases:

>100_bases
CGGCGGGCCGCGCGAATCATGAATGACGACGTGCGAGCCGCGGGCGGCGTGCGCGCCGCGCATGACCGGCTGCAGCCGGC
GCTGCTCGACCGGCTGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MGVAMFMKVDGVTGESADAQHKGWTDIQSFSWGASQPGAMASGSGGNAGKASFNDLVVAAYMDKGATAIIKNCASGKHLP
TVEISACKTGGSQIEFMRVTLQEVLVTSAQIAGVDPGDAADRLMMQYGFQAAKVKKQYWQQNDNGGKGAEVSVGWNIKEN
TEM

Sequences:

>Translated_163_residues
MGVAMFMKVDGVTGESADAQHKGWTDIQSFSWGASQPGAMASGSGGNAGKASFNDLVVAAYMDKGATAIIKNCASGKHLP
TVEISACKTGGSQIEFMRVTLQEVLVTSAQIAGVDPGDAADRLMMQYGFQAAKVKKQYWQQNDNGGKGAEVSVGWNIKEN
TEM
>Mature_162_residues
GVAMFMKVDGVTGESADAQHKGWTDIQSFSWGASQPGAMASGSGGNAGKASFNDLVVAAYMDKGATAIIKNCASGKHLPT
VEISACKTGGSQIEFMRVTLQEVLVTSAQIAGVDPGDAADRLMMQYGFQAAKVKKQYWQQNDNGGKGAEVSVGWNIKENT
EM

Specific function: Required for assembly of the protein secretion apparatus HSI-I. Actively secreted during chronic infection of cystic fibrosis patients [H]

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 17130; Mature: 16999

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVAMFMKVDGVTGESADAQHKGWTDIQSFSWGASQPGAMASGSGGNAGKASFNDLVVAA
CCEEEEEEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
YMDKGATAIIKNCASGKHLPTVEISACKTGGSQIEFMRVTLQEVLVTSAQIAGVDPGDAA
ECCCCHHHHHHHHCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHH
DRLMMQYGFQAAKVKKQYWQQNDNGGKGAEVSVGWNIKENTEM
HHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure 
GVAMFMKVDGVTGESADAQHKGWTDIQSFSWGASQPGAMASGSGGNAGKASFNDLVVAA
CEEEEEEECCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
YMDKGATAIIKNCASGKHLPTVEISACKTGGSQIEFMRVTLQEVLVTSAQIAGVDPGDAA
ECCCCHHHHHHHHCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHH
DRLMMQYGFQAAKVKKQYWQQNDNGGKGAEVSVGWNIKENTEM
HHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]