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The map label for this gene is rhsC [H]

Identifier: 53723106

GI number: 53723106

Start: 2829708

End: 2830487

Strand: Reverse

Name: rhsC [H]

Synonym: BPSS2091

Alternate gene names: 53723106

Gene position: 2830487-2829708 (Counterclockwise)

Preceding gene: 53723107

Following gene: 53723105

Centisome position: 89.21

GC content: 61.15

Gene sequence:

>780_bases
TTGCTTGTGCAGACGTTGCCGGATGTCAGCGCAGTCAGAACGGAATTTGACCTCGATCACCGACCGGTCTGCATGACGTT
GATAGGCGGCCGGCAGTGGGGCTACGAGTGGGATACGTTCGGTAATCTGCTCGCGCAGAGCGATCCATCGGGGGCGATAT
CTCGCTATACCTATGACGAGTACGGCCAGCTTGTTGAGCATACTGGGCCGCGTGGTGCGAGCACACGGTTCGATTATCAC
CCGGACGGCAATCTCGCGGCGCAGATCGATGCGTTGGGGCATCGCACGCAGTATCGGTACGATGCGCGCGGCTACCTCGT
CGAAGCGATCGATGCGCTCGGACAGCAAACCCAATACGAGTACGACCGCAACGGCCATCTGACGCGCGCAATCGAGCCGG
GCGGGCGTGAGATTCACTGTGCGTACGACGCCGATGGAAATCTGTCTCGCCATCGTGACCCCATGGGCCACGTGACGCAG
ATGGAGTACTCGGCGCTCGGACAGGTCAGCAGACGGCTCGCGCCCGATGGCACCACCGTTGAATACCGCTACGACAGCCA
CATTACCAGCGCGGGATTCCGAACGCGGCCCATCGGTCGGCTGCCGATGTTCGCGTGCCAGACTTGCCGGCGCTACTTCA
GTCGCACGGCCGCCCCCCACTCGGCGAGAAACATCTCAAGAAACTCGATCTATTCGTGTCCTTGCTGTCGCATCCGATCT
CGTGCGTTGATGCGGGCGAACAGATGGGCAGCCTATCGACCGACATCGGAAAACGCGTGA

Upstream 100 bases:

>100_bases
GCGGAATCCGGCGAACGTGGGCCGAACGGTGGGGCGTGCGAGCGCGATGATCGATCCGGCGGGGCGGACGACGGCTTGGG
AATATGACGCGTATGGCAGT

Downstream 100 bases:

>100_bases
CGGCCTGGCGCGCGTGGCTGTTGGAGCTCGACCCGAGCGGCAAGTGGGAGCGCCGCGTGAGGCTCAGCCATCGACCTCCG
CATTGCCCGAACTGCGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MLVQTLPDVSAVRTEFDLDHRPVCMTLIGGRQWGYEWDTFGNLLAQSDPSGAISRYTYDEYGQLVEHTGPRGASTRFDYH
PDGNLAAQIDALGHRTQYRYDARGYLVEAIDALGQQTQYEYDRNGHLTRAIEPGGREIHCAYDADGNLSRHRDPMGHVTQ
MEYSALGQVSRRLAPDGTTVEYRYDSHITSAGFRTRPIGRLPMFACQTCRRYFSRTAAPHSARNISRNSIYSCPCCRIRS
RALMRANRWAAYRPTSENA

Sequences:

>Translated_259_residues
MLVQTLPDVSAVRTEFDLDHRPVCMTLIGGRQWGYEWDTFGNLLAQSDPSGAISRYTYDEYGQLVEHTGPRGASTRFDYH
PDGNLAAQIDALGHRTQYRYDARGYLVEAIDALGQQTQYEYDRNGHLTRAIEPGGREIHCAYDADGNLSRHRDPMGHVTQ
MEYSALGQVSRRLAPDGTTVEYRYDSHITSAGFRTRPIGRLPMFACQTCRRYFSRTAAPHSARNISRNSIYSCPCCRIRS
RALMRANRWAAYRPTSENA
>Mature_259_residues
MLVQTLPDVSAVRTEFDLDHRPVCMTLIGGRQWGYEWDTFGNLLAQSDPSGAISRYTYDEYGQLVEHTGPRGASTRFDYH
PDGNLAAQIDALGHRTQYRYDARGYLVEAIDALGQQTQYEYDRNGHLTRAIEPGGREIHCAYDADGNLSRHRDPMGHVTQ
MEYSALGQVSRRLAPDGTTVEYRYDSHITSAGFRTRPIGRLPMFACQTCRRYFSRTAAPHSARNISRNSIYSCPCCRIRS
RALMRANRWAAYRPTSENA

Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI1786917, Length=184, Percent_Identity=32.6086956521739, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1790020, Length=184, Percent_Identity=32.0652173913043, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI48994942, Length=184, Percent_Identity=32.0652173913043, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786706, Length=210, Percent_Identity=27.6190476190476, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385
- InterPro:   IPR006530 [H]

Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]

EC number: NA

Molecular weight: Translated: 29382; Mature: 29382

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVQTLPDVSAVRTEFDLDHRPVCMTLIGGRQWGYEWDTFGNLLAQSDPSGAISRYTYDE
CCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHCCHHH
YGQLVEHTGPRGASTRFDYHPDGNLAAQIDALGHRTQYRYDARGYLVEAIDALGQQTQYE
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCEEECCCHHHHHHHHHHCHHHCCC
YDRNGHLTRAIEPGGREIHCAYDADGNLSRHRDPMGHVTQMEYSALGQVSRRLAPDGTTV
CCCCCCEEEEECCCCCEEEEEECCCCCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE
EYRYDSHITSAGFRTRPIGRLPMFACQTCRRYFSRTAAPHSARNISRNSIYSCPCCRIRS
EEEECCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHH
RALMRANRWAAYRPTSENA
HHHHHHCCCEEECCCCCCC
>Mature Secondary Structure
MLVQTLPDVSAVRTEFDLDHRPVCMTLIGGRQWGYEWDTFGNLLAQSDPSGAISRYTYDE
CCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHCCHHH
YGQLVEHTGPRGASTRFDYHPDGNLAAQIDALGHRTQYRYDARGYLVEAIDALGQQTQYE
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHCCCCCEEECCCHHHHHHHHHHCHHHCCC
YDRNGHLTRAIEPGGREIHCAYDADGNLSRHRDPMGHVTQMEYSALGQVSRRLAPDGTTV
CCCCCCEEEEECCCCCEEEEEECCCCCCHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE
EYRYDSHITSAGFRTRPIGRLPMFACQTCRRYFSRTAAPHSARNISRNSIYSCPCCRIRS
EEEECCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHH
RALMRANRWAAYRPTSENA
HHHHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8387990; 8905232; 9278503; 2644231; 2403547; 7934896 [H]