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The map label for this gene is ycjN [C]

Identifier: 53723100

GI number: 53723100

Start: 2820342

End: 2821583

Strand: Reverse

Name: ycjN [C]

Synonym: BPSS2084

Alternate gene names: 53723100

Gene position: 2821583-2820342 (Counterclockwise)

Preceding gene: 53723101

Following gene: 53723099

Centisome position: 88.92

GC content: 53.3

Gene sequence:

>1242_bases
ATGGAGACACTCAAGAAACTACGGGGAACAGTATTGCTTCCCATGATCGCGATGGTCCTGCTGAATGCCAATGCAGCCCC
GCTTGTCATCAATACCGACACATCTGATCAAGCAGTAAAAGCAGCTTTCGATGCAGCAGTAAACGATTTCAAAATCGAGA
ATCCAGATGTACAGGTCAAGGTAAACCGCTTCGATCACGACGCCTATAAGACAGCAATTCGAAACTTCCTGACTGCCGAT
TCTCCCGACGTGGTCAATTGGTATCCAGGACGCAAGATGGAGCCGTTCGTACGAGCAGGGCTGTTTGAAGACGTGTCTGA
TATTTGGACCAAATATAATCTCGACACTAAGCTTAAATCCGCCTTGTCCGCCATGACGCTGAACGGAAAAAAATGGGGAA
TCCCTTACACGTATTACCAGTGGGGAATCTACTATCGAAAAGATATTTTTTCGAAATTTGGCATCGAGCCGCCTAACACT
TGGCAGGAATTGCTCGACGCATGCGCAAAGCTCAAGGCGAACGGTGTTGCGCCGTTCGTCATCGGGACCAAGGAACCGTG
GCCGAATCTTGCGTGGTTCGACTATCTTAATCTACGTGTAAACGGATTTGCATTCCACATGGCCCTGACGGGAGGAAAGG
TCTCCTTTAAGGATCCACGTGTGCGAGCGGTGTTCGATCGCTGGGATCAATTGACGAAGCCCGGCTACTTCATGACCAAT
CACGCATCCTACACATGGCAGGAAGCTGCGGCGTTGCTGGCCCAAGGCAAGGGAGCAATGTACCTGATGGGCAATTTCGT
GGTGGCACCAATGAAACAAGCGGGTCTTGACGCCGAAAAGCTGGGATTTATGCCGTTTCCTATCATCGATCCGTCGATCC
CTCGTGCGGAGGAAGCGCCGATCGAATCGATCCACATTCCAACAAACGCGAAAAACAAGGCTGATGCGCGCCGCTTCCTG
GCCTACATGGCGAGAGCGGACGTCCAAGCCAAGTACGGCGAGCGAACCGAGGAGCTACCGGTCAATCAGGATGCGCCTCC
ACCGAGCGATCCCTATCTGAAGGCGGGTGCCGCGCTGCTCGCGAAGGCGCAGGCGCTTTCCCAGTTCTTCGATCGAGATG
CCTCCCCGGAGTTGACTCAGGCCGCCATGGACGCATTCGAGCGGTACATGTTGAAACCTGACACCCGCGCCGCAGCCCTT
GATCGTCTCGAGCAAGTACGTCAGCGCGTTTACAACAAGTAG

Upstream 100 bases:

>100_bases
GTTCAATGGTCGCTCGAATGCATGCGGATGGACATTACATCACAAGCAAACGCCACTTCCGATAATGCGGGCGCGGCCAA
CTATCAACGAGGAGAATTAT

Downstream 100 bases:

>100_bases
CACGGGGTCACTCGCGCTCGACGGCGGGCGCGGTGCTTCGTCGGTTCGGCATTGGAGGTCACGTGCAATTCACTGCCACG
TCTATCAAACTTTCGCCCAC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
METLKKLRGTVLLPMIAMVLLNANAAPLVINTDTSDQAVKAAFDAAVNDFKIENPDVQVKVNRFDHDAYKTAIRNFLTAD
SPDVVNWYPGRKMEPFVRAGLFEDVSDIWTKYNLDTKLKSALSAMTLNGKKWGIPYTYYQWGIYYRKDIFSKFGIEPPNT
WQELLDACAKLKANGVAPFVIGTKEPWPNLAWFDYLNLRVNGFAFHMALTGGKVSFKDPRVRAVFDRWDQLTKPGYFMTN
HASYTWQEAAALLAQGKGAMYLMGNFVVAPMKQAGLDAEKLGFMPFPIIDPSIPRAEEAPIESIHIPTNAKNKADARRFL
AYMARADVQAKYGERTEELPVNQDAPPPSDPYLKAGAALLAKAQALSQFFDRDASPELTQAAMDAFERYMLKPDTRAAAL
DRLEQVRQRVYNK

Sequences:

>Translated_413_residues
METLKKLRGTVLLPMIAMVLLNANAAPLVINTDTSDQAVKAAFDAAVNDFKIENPDVQVKVNRFDHDAYKTAIRNFLTAD
SPDVVNWYPGRKMEPFVRAGLFEDVSDIWTKYNLDTKLKSALSAMTLNGKKWGIPYTYYQWGIYYRKDIFSKFGIEPPNT
WQELLDACAKLKANGVAPFVIGTKEPWPNLAWFDYLNLRVNGFAFHMALTGGKVSFKDPRVRAVFDRWDQLTKPGYFMTN
HASYTWQEAAALLAQGKGAMYLMGNFVVAPMKQAGLDAEKLGFMPFPIIDPSIPRAEEAPIESIHIPTNAKNKADARRFL
AYMARADVQAKYGERTEELPVNQDAPPPSDPYLKAGAALLAKAQALSQFFDRDASPELTQAAMDAFERYMLKPDTRAAAL
DRLEQVRQRVYNK
>Mature_413_residues
METLKKLRGTVLLPMIAMVLLNANAAPLVINTDTSDQAVKAAFDAAVNDFKIENPDVQVKVNRFDHDAYKTAIRNFLTAD
SPDVVNWYPGRKMEPFVRAGLFEDVSDIWTKYNLDTKLKSALSAMTLNGKKWGIPYTYYQWGIYYRKDIFSKFGIEPPNT
WQELLDACAKLKANGVAPFVIGTKEPWPNLAWFDYLNLRVNGFAFHMALTGGKVSFKDPRVRAVFDRWDQLTKPGYFMTN
HASYTWQEAAALLAQGKGAMYLMGNFVVAPMKQAGLDAEKLGFMPFPIIDPSIPRAEEAPIESIHIPTNAKNKADARRFL
AYMARADVQAKYGERTEELPVNQDAPPPSDPYLKAGAALLAKAQALSQFFDRDASPELTQAAMDAFERYMLKPDTRAAAL
DRLEQVRQRVYNK

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16 [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787569, Length=303, Percent_Identity=23.7623762376238, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46487; Mature: 46487

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLKKLRGTVLLPMIAMVLLNANAAPLVINTDTSDQAVKAAFDAAVNDFKIENPDVQVK
CCHHHHHHCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCEECCCCEEEE
VNRFDHDAYKTAIRNFLTADSPDVVNWYPGRKMEPFVRAGLFEDVSDIWTKYNLDTKLKS
EECCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
ALSAMTLNGKKWGIPYTYYQWGIYYRKDIFSKFGIEPPNTWQELLDACAKLKANGVAPFV
HHHHHEECCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEE
IGTKEPWPNLAWFDYLNLRVNGFAFHMALTGGKVSFKDPRVRAVFDRWDQLTKPGYFMTN
EECCCCCCCCHHHEEEEEEECCEEEEEEEECCEEECCCCHHHHHHHHHHHHCCCCEEEEC
HASYTWQEAAALLAQGKGAMYLMGNFVVAPMKQAGLDAEKLGFMPFPIIDPSIPRAEEAP
CCCCCHHHHHHHHHCCCCCEEEECCEEEECHHHHCCCHHHCCCCCCCCCCCCCCCCCCCC
IESIHIPTNAKNKADARRFLAYMARADVQAKYGERTEELPVNQDAPPPSDPYLKAGAALL
CCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AKAQALSQFFDRDASPELTQAAMDAFERYMLKPDTRAAALDRLEQVRQRVYNK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METLKKLRGTVLLPMIAMVLLNANAAPLVINTDTSDQAVKAAFDAAVNDFKIENPDVQVK
CCHHHHHHCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCCEECCCCEEEE
VNRFDHDAYKTAIRNFLTADSPDVVNWYPGRKMEPFVRAGLFEDVSDIWTKYNLDTKLKS
EECCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH
ALSAMTLNGKKWGIPYTYYQWGIYYRKDIFSKFGIEPPNTWQELLDACAKLKANGVAPFV
HHHHHEECCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEE
IGTKEPWPNLAWFDYLNLRVNGFAFHMALTGGKVSFKDPRVRAVFDRWDQLTKPGYFMTN
EECCCCCCCCHHHEEEEEEECCEEEEEEEECCEEECCCCHHHHHHHHHHHHCCCCEEEEC
HASYTWQEAAALLAQGKGAMYLMGNFVVAPMKQAGLDAEKLGFMPFPIIDPSIPRAEEAP
CCCCCHHHHHHHHHCCCCCEEEECCEEEECHHHHCCCHHHCCCCCCCCCCCCCCCCCCCC
IESIHIPTNAKNKADARRFLAYMARADVQAKYGERTEELPVNQDAPPPSDPYLKAGAALL
CCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AKAQALSQFFDRDASPELTQAAMDAFERYMLKPDTRAAALDRLEQVRQRVYNK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]