| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53723068
Identifier: 53723068
GI number: 53723068
Start: 2767010
End: 2768149
Strand: Reverse
Name: 53723068
Synonym: BPSS2051
Alternate gene names: NA
Gene position: 2768149-2767010 (Counterclockwise)
Preceding gene: 53723069
Following gene: 53723067
Centisome position: 87.24
GC content: 64.3
Gene sequence:
>1140_bases ATGGCGACGAAAGGCCAATCCCATACACGGCTACCTGCCGTCGGGCCCGATACGGAACAGGATCGGGGACTGACGGCCTT CCTCACCGCGCAAATCGCCCCATTGCTGTCCGAGAGCCACGAGCTGCGTCCCCGGTTCCCACGCTGTGGCAGTAGGCACA TCAATAGCGCGGGATTCCGGACCCGCCCCATTGGCCGCCTGCCGATGTTCGAATGCCAGATGTGTCGGCGCTACTTCAGC CGCACCGCCGGCACGCCGCTCGGCGAGAAGCACCTCAAAAAGCTCGATCTGTTCGTGTTCCTGCTGTCGCAGCCGATCTC GTGTCTCGAAGCCGGAAAGCAGATGGGCAGCTTGCCGGACGATATTGGGCAACGGGTGAAGGTTTGGCGCGCCTGGCTGT TGCAGCTCGATCCGAGCGGTCAGTGGGAGCGGCGTGTCCGGCTCGGCGGCCGTCCAACCGAGCTCAATCCTGCGCCTCTG GCCTTCGACGAGATCGGGGCACGCGAAGATCGTGCGTTGACCGCCCGCCTGACGTGCGAGTTCGACGACGTCAATTCTCT CAGTCAGCAGCCCCCGGCCTGCCCCGATTGTGGCGGCCGCAACACGCGCTTCGATGAATGCCCGAACGGCGCCTTCCCGC GCTTCATGTGCCTGCGCTGCCGGCGCAGATTCACCCGGCGCCGCGGCACGCCGTTCCTCAATACGAAGATGAGCTCGCTC GAGCGCATGCGCCTGTTCATTCGCCACCTGTCGCTGCCGTTGTCGGTCATGCAGGCGGCGGACCTCGTTGGCACCAGTCA CGGGATAATCCATAAATGGCTCAGGATGTTCATCGAATTCGCGGATCAATTGGAGCCCAGCGGGAGCTTGTCGGCCCGGA TTCAGCTGGGTGTTGAGCCCACGGAGACGACGCCGTGTCCGTTCTGCGGCCGAGCGGGAAGTGCGTGGCAGACGGAGCGC GGGCACTGGACATGCGCGGGTTGTGGGCGCCTGTTTTCGATGCGGCGCACGGTCGTCGAGCGCAATGGTGTCCTGGAGAT CGTCGACGAGTCTATGGCGGGCGACGAGGAACTCATCACGTCGCAGCGCACGATCGCGCGCGACGATCGCCACGACAGCG AATATGGCAAACGATCGTAA
Upstream 100 bases:
>100_bases GGTATGGCTACGACCTGTTCGCTGGCACACCCGTCTACAAACCGTCCGGGTTTCCCACCGCGCGCGTGACGGTGGGCTTT CAGCTCACGGCGCAATTCTG
Downstream 100 bases:
>100_bases CTGCTCGGCCGGCATCGGCGACCTGAAGCGCCTGGCCGGAACAAGGTCGAGACCAGCGGTGGAGACGCCGACGAAGAAGG CGAGGTCTTGGGTGCTCGCT
Product: DNA-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MATKGQSHTRLPAVGPDTEQDRGLTAFLTAQIAPLLSESHELRPRFPRCGSRHINSAGFRTRPIGRLPMFECQMCRRYFS RTAGTPLGEKHLKKLDLFVFLLSQPISCLEAGKQMGSLPDDIGQRVKVWRAWLLQLDPSGQWERRVRLGGRPTELNPAPL AFDEIGAREDRALTARLTCEFDDVNSLSQQPPACPDCGGRNTRFDECPNGAFPRFMCLRCRRRFTRRRGTPFLNTKMSSL ERMRLFIRHLSLPLSVMQAADLVGTSHGIIHKWLRMFIEFADQLEPSGSLSARIQLGVEPTETTPCPFCGRAGSAWQTER GHWTCAGCGRLFSMRRTVVERNGVLEIVDESMAGDEELITSQRTIARDDRHDSEYGKRS
Sequences:
>Translated_379_residues MATKGQSHTRLPAVGPDTEQDRGLTAFLTAQIAPLLSESHELRPRFPRCGSRHINSAGFRTRPIGRLPMFECQMCRRYFS RTAGTPLGEKHLKKLDLFVFLLSQPISCLEAGKQMGSLPDDIGQRVKVWRAWLLQLDPSGQWERRVRLGGRPTELNPAPL AFDEIGAREDRALTARLTCEFDDVNSLSQQPPACPDCGGRNTRFDECPNGAFPRFMCLRCRRRFTRRRGTPFLNTKMSSL ERMRLFIRHLSLPLSVMQAADLVGTSHGIIHKWLRMFIEFADQLEPSGSLSARIQLGVEPTETTPCPFCGRAGSAWQTER GHWTCAGCGRLFSMRRTVVERNGVLEIVDESMAGDEELITSQRTIARDDRHDSEYGKRS >Mature_378_residues ATKGQSHTRLPAVGPDTEQDRGLTAFLTAQIAPLLSESHELRPRFPRCGSRHINSAGFRTRPIGRLPMFECQMCRRYFSR TAGTPLGEKHLKKLDLFVFLLSQPISCLEAGKQMGSLPDDIGQRVKVWRAWLLQLDPSGQWERRVRLGGRPTELNPAPLA FDEIGAREDRALTARLTCEFDDVNSLSQQPPACPDCGGRNTRFDECPNGAFPRFMCLRCRRRFTRRRGTPFLNTKMSSLE RMRLFIRHLSLPLSVMQAADLVGTSHGIIHKWLRMFIEFADQLEPSGSLSARIQLGVEPTETTPCPFCGRAGSAWQTERG HWTCAGCGRLFSMRRTVVERNGVLEIVDESMAGDEELITSQRTIARDDRHDSEYGKRS
Specific function: Unknown
COG id: COG3677
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42803; Mature: 42671
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKGQSHTRLPAVGPDTEQDRGLTAFLTAQIAPLLSESHELRPRFPRCGSRHINSAGFR CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC TRPIGRLPMFECQMCRRYFSRTAGTPLGEKHLKKLDLFVFLLSQPISCLEAGKQMGSLPD CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCH DIGQRVKVWRAWLLQLDPSGQWERRVRLGGRPTELNPAPLAFDEIGAREDRALTARLTCE HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEEC FDDVNSLSQQPPACPDCGGRNTRFDECPNGAFPRFMCLRCRRRFTRRRGTPFLNTKMSSL CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH ERMRLFIRHLSLPLSVMQAADLVGTSHGIIHKWLRMFIEFADQLEPSGSLSARIQLGVEP HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC TETTPCPFCGRAGSAWQTERGHWTCAGCGRLFSMRRTVVERNGVLEIVDESMAGDEELIT CCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHEEHHHHHCCCHHHHH SQRTIARDDRHDSEYGKRS HHHHHHHCCCCCCCCCCCC >Mature Secondary Structure ATKGQSHTRLPAVGPDTEQDRGLTAFLTAQIAPLLSESHELRPRFPRCGSRHINSAGFR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC TRPIGRLPMFECQMCRRYFSRTAGTPLGEKHLKKLDLFVFLLSQPISCLEAGKQMGSLPD CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCH DIGQRVKVWRAWLLQLDPSGQWERRVRLGGRPTELNPAPLAFDEIGAREDRALTARLTCE HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEEC FDDVNSLSQQPPACPDCGGRNTRFDECPNGAFPRFMCLRCRRRFTRRRGTPFLNTKMSSL CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH ERMRLFIRHLSLPLSVMQAADLVGTSHGIIHKWLRMFIEFADQLEPSGSLSARIQLGVEP HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC TETTPCPFCGRAGSAWQTERGHWTCAGCGRLFSMRRTVVERNGVLEIVDESMAGDEELIT CCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCHHEEHHHHHCCCHHHHH SQRTIARDDRHDSEYGKRS HHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA