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The map label for this gene is tnpA

Identifier: 53722933

GI number: 53722933

Start: 2589898

End: 2591118

Strand: Reverse

Name: tnpA

Synonym: BPSS1912

Alternate gene names: 53722933

Gene position: 2591118-2589898 (Counterclockwise)

Preceding gene: 53722934

Following gene: 53722928

Centisome position: 81.66

GC content: 62.16

Gene sequence:

>1221_bases
TTGCTCGATCGCAAGGCACTTCAGGCACTAGGTTGCTGGACAGGCTATCGGCTGGAGCGGGTGGAGTGGCCGCAGGGCGA
TAGCCGCACGCTGTCGCTCTACCTGAAGCCGGTCAGTCAGATCATGTACTGCGAGCAATGCGGTGCGCGTTGCCAGCAGA
TTCATGAAACGACCGTACGGCGGGTACGTGATCTGCCGTTGTTCGAGTACCGGGTGGTGCTGCACGTGCCTCGACGCCGA
GTCTGGTGCGAACGCTGCGGCGCAGCGCGGCTGGAGAAGCTGGACTGGCTGGGCCGCTACCAGCGGGTGACGGAGCGGTT
TGCCAAGGCCTGCGAGAAGTTGCTGCAGGCCGCCAGCGTACAGGCCGTGGCGGCCTTCTACGATCTGGGCTGGCACACGG
TCAAATCGATCGACAAGATGCGCTTGCGCGCGCGCGTGGCCGAACCGGACTGGTCGACGATCCGTTATCTGGCGATGGAC
GAGTTCGCGCTCCATAAAGGCCATCGCTACGCCACGGTGGTGGTTGATCCGATCGGCCGACAGGTCCTCTGGGTTGGGCC
CGGACGGTCACGCGAGACGGCGCGCGCCTTCTTCGAACAACTCCCCGAAGGCGTGGCCGAGCGCATCGAAGCGGTCGCAA
TCGACATGACCACGGCCTATGAGCTGGAGATCAAGGAACAGTGCCCACAGGCGGAAATCGTCTTTGACCTGTACCACGTC
GTGGCCAAGTACGGTCGCGAGGTGATCGATCGGGTACGGGTGGATCAGGCCAACCAACTGCGACATGACAAGCCGGCCCG
TAAGGTTCTGAAGTCCAGTCGCTGGTTGCTGCTGCGCAACCGTCATAACCTGAAGCCAGAACAGGCCGTGCATCTGAAGG
AACTGCTGGCGGCCAATCAGTCGCTGTTATGCGTCTATGTGCTGCGCGACGAGCTCAAACGGCTCTGGTTCTACCGCAAG
CCGGCCTGCGCGGAAAAGGCTTGGGGGCAATGGTTCGAACAGGCTCAGCAAAGCGGGATCGCCGCCTTGCAAAAGTTCGC
CCAGCGCTTGCAGGGTTACTGGCACGGAATCGTGGCCCGCTGCCGCCATCCGCTCAATACCAGCGTCGTCGAAGGTATCA
ACAACACGATCAAGGTCATCAAGCGCCGCGCTTACGGGTACCGCGACGAGCAATACTTCTTCCTCAAGATCCGCGCCGCG
TTCCCCGGGATTCCGCGATGA

Upstream 100 bases:

>100_bases
GCGCGGCCGCCTTTTTTTAGGTTCATCGCGGAAAACCGTGGAGCCTTGGAGAACGATTGCGTAACCTGACGCCTGATTTT
ATGGATGTCAGGAGGCGGAA

Downstream 100 bases:

>100_bases
ACCTTTTTTTATGCGCGTTGCCTGTCGTTCTTGTTCTGGCCTGACGCCTGACGCCTGACGCACGGCGCACGGCGCACGGC
GCACGGCGCGCCAGGCGTTG

Product: IS1001 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MLDRKALQALGCWTGYRLERVEWPQGDSRTLSLYLKPVSQIMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRR
VWCERCGAARLEKLDWLGRYQRVTERFAKACEKLLQAASVQAVAAFYDLGWHTVKSIDKMRLRARVAEPDWSTIRYLAMD
EFALHKGHRYATVVVDPIGRQVLWVGPGRSRETARAFFEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHV
VAKYGREVIDRVRVDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQSLLCVYVLRDELKRLWFYRK
PACAEKAWGQWFEQAQQSGIAALQKFAQRLQGYWHGIVARCRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAA
FPGIPR

Sequences:

>Translated_406_residues
MLDRKALQALGCWTGYRLERVEWPQGDSRTLSLYLKPVSQIMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRR
VWCERCGAARLEKLDWLGRYQRVTERFAKACEKLLQAASVQAVAAFYDLGWHTVKSIDKMRLRARVAEPDWSTIRYLAMD
EFALHKGHRYATVVVDPIGRQVLWVGPGRSRETARAFFEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHV
VAKYGREVIDRVRVDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQSLLCVYVLRDELKRLWFYRK
PACAEKAWGQWFEQAQQSGIAALQKFAQRLQGYWHGIVARCRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAA
FPGIPR
>Mature_406_residues
MLDRKALQALGCWTGYRLERVEWPQGDSRTLSLYLKPVSQIMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRR
VWCERCGAARLEKLDWLGRYQRVTERFAKACEKLLQAASVQAVAAFYDLGWHTVKSIDKMRLRARVAEPDWSTIRYLAMD
EFALHKGHRYATVVVDPIGRQVLWVGPGRSRETARAFFEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHV
VAKYGREVIDRVRVDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQSLLCVYVLRDELKRLWFYRK
PACAEKAWGQWFEQAQQSGIAALQKFAQRLQGYWHGIVARCRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAA
FPGIPR

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 47508; Mature: 47508

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDRKALQALGCWTGYRLERVEWPQGDSRTLSLYLKPVSQIMYCEQCGARCQQIHETTVR
CCCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RVRDLPLFEYRVVLHVPRRRVWCERCGAARLEKLDWLGRYQRVTERFAKACEKLLQAASV
HHHCCCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAVAAFYDLGWHTVKSIDKMRLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDPIGR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
QVLWVGPGRSRETARAFFEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHV
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEHHHHCCCHHHHHHHHHH
VAKYGREVIDRVRVDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQ
HHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCC
SLLCVYVLRDELKRLWFYRKPACAEKAWGQWFEQAQQSGIAALQKFAQRLQGYWHGIVAR
CCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
CRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAAFPGIPR
HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MLDRKALQALGCWTGYRLERVEWPQGDSRTLSLYLKPVSQIMYCEQCGARCQQIHETTVR
CCCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
RVRDLPLFEYRVVLHVPRRRVWCERCGAARLEKLDWLGRYQRVTERFAKACEKLLQAASV
HHHCCCHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAVAAFYDLGWHTVKSIDKMRLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDPIGR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCC
QVLWVGPGRSRETARAFFEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHV
EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEHHHHCCCHHHHHHHHHH
VAKYGREVIDRVRVDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPEQAVHLKELLAANQ
HHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCC
SLLCVYVLRDELKRLWFYRKPACAEKAWGQWFEQAQQSGIAALQKFAQRLQGYWHGIVAR
CCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
CRHPLNTSVVEGINNTIKVIKRRAYGYRDEQYFFLKIRAAFPGIPR
HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]